RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 RUSC2Q8N2Y8 1516 aa20.05■□□□□ 0.8
SCFD1-206ENST00000484733 CUL7Q14999 1698 aa20.04■□□□□ 0.8
SCFD1-206ENST00000484733 KIAA0586Q9BVV6 1533 aa19.99■□□□□ 0.79
SCFD1-206ENST00000484733 CARMIL1Q5VZK9 1371 aa19.92■□□□□ 0.78
SCFD1-206ENST00000484733 KIF13AQ9H1H9 1805 aa19.86■□□□□ 0.77
SCFD1-206ENST00000484733 MAPKBP1O60336 1514 aa19.83■□□□□ 0.77
SCFD1-206ENST00000484733 ADCY10Q96PN6 1610 aa19.83■□□□□ 0.77
SCFD1-206ENST00000484733 NPM1P06748 294 aaKnown RBP eCLIP19.82■□□□□ 0.76
SCFD1-206ENST00000484733 ABCC10Q5T3U5 1492 aa19.8■□□□□ 0.76
SCFD1-206ENST00000484733 IQGAP2Q13576 1575 aa19.78■□□□□ 0.76
SCFD1-206ENST00000484733 CARMIL2Q6F5E8 1435 aa19.77■□□□□ 0.76
SCFD1-206ENST00000484733 PTPRGP23470 1445 aa19.76■□□□□ 0.75
SCFD1-206ENST00000484733 TNIKQ9UKE5 1360 aa19.76■□□□□ 0.75
SCFD1-206ENST00000484733 RAPGEF2Q9Y4G8 1499 aa19.75■□□□□ 0.75
SCFD1-206ENST00000484733 DIP2BQ9P265 1576 aa19.74■□□□□ 0.75
SCFD1-206ENST00000484733 FAM69CQ0P6D2 419 aa19.73■□□□□ 0.75
SCFD1-206ENST00000484733 DISP1Q96F81 1524 aa19.69■□□□□ 0.74
SCFD1-206ENST00000484733 UGGT2Q9NYU1 1516 aa19.69■□□□□ 0.74
SCFD1-206ENST00000484733 UHRF1BP1LA0JNW5 1464 aa19.68■□□□□ 0.74
SCFD1-206ENST00000484733 ABCC2Q92887 1545 aa19.66■□□□□ 0.74
SCFD1-206ENST00000484733 UACAQ9BZF9 1416 aa19.63■□□□□ 0.73
SCFD1-206ENST00000484733 AEBP2Q6ZN18 517 aaPredicted RBP19.62■□□□□ 0.73
SCFD1-206ENST00000484733 PLB1Q6P1J6 1458 aa19.6■□□□□ 0.73
SCFD1-206ENST00000484733 KIAA0556O60303 1618 aa19.6■□□□□ 0.73
SCFD1-206ENST00000484733 TTBK1Q5TCY1 1321 aaPredicted RBP19.59■□□□□ 0.73
SCFD1-206ENST00000484733 CTTNBP2Q8WZ74 1663 aa19.59■□□□□ 0.73
SCFD1-206ENST00000484733 GLI2P10070 1586 aa19.58■□□□□ 0.72
SCFD1-206ENST00000484733 PRXQ9BXM0 1461 aa19.57■□□□□ 0.72
SCFD1-206ENST00000484733 ASXL2Q76L83 1435 aa19.57■□□□□ 0.72
SCFD1-206ENST00000484733 KDM5BQ9UGL1 1544 aa19.56■□□□□ 0.72
SCFD1-206ENST00000484733 TSPOAP1O95153 1857 aa19.54■□□□□ 0.72
SCFD1-206ENST00000484733 KDM6BO15054 1643 aa19.53■□□□□ 0.72
SCFD1-206ENST00000484733 GOLGA3Q08378 1498 aa19.53■□□□□ 0.72
SCFD1-206ENST00000484733 ZCCHC11Q5TAX3 1644 aaKnown RBP19.5■□□□□ 0.71
SCFD1-206ENST00000484733 PPRC1Q5VV67 1664 aaKnown RBP19.48■□□□□ 0.71
SCFD1-206ENST00000484733 EPRSP07814 1512 aaKnown RBP19.47■□□□□ 0.71
SCFD1-206ENST00000484733 ABCA8O94911 1581 aa19.44■□□□□ 0.7
SCFD1-206ENST00000484733 MAP3K4Q9Y6R4 1608 aa19.44■□□□□ 0.7
SCFD1-206ENST00000484733 CSRNP3Q8WYN3 585 aa19.41■□□□□ 0.7
SCFD1-206ENST00000484733 WDR7Q9Y4E6 1490 aa19.4■□□□□ 0.7
SCFD1-206ENST00000484733 EEA1Q15075 1411 aa19.39■□□□□ 0.69
SCFD1-206ENST00000484733 TEX14Q8IWB6 1497 aa19.38■□□□□ 0.69
SCFD1-206ENST00000484733 FAM9AQ8IZU1 332 aaPredicted RBP19.33■□□□□ 0.69
SCFD1-206ENST00000484733 SAMD9Q5K651 1589 aa19.32■□□□□ 0.68
SCFD1-206ENST00000484733 COL17A1Q9UMD9 1497 aaPredicted RBP19.32■□□□□ 0.68
SCFD1-206ENST00000484733 CFAP43Q8NDM7 1665 aa19.31■□□□□ 0.68
SCFD1-206ENST00000484733 KDM4FA0A1W2PPD8 638 aa19.31■□□□□ 0.68
SCFD1-206ENST00000484733 MAGI3Q5TCQ9 1506 aa19.3■□□□□ 0.68
SCFD1-206ENST00000484733 CD109Q6YHK3 1445 aa19.27■□□□□ 0.68
SCFD1-206ENST00000484733 ATP10BO94823 1461 aa19.26■□□□□ 0.67
SCFD1-206ENST00000484733 P3H3Q8IVL6 736 aa19.25■□□□□ 0.67
SCFD1-206ENST00000484733 KCNH8Q96L42 1107 aa19.24■□□□□ 0.67
SCFD1-206ENST00000484733 RAPGEF6Q8TEU7 1601 aa19.22■□□□□ 0.67
SCFD1-206ENST00000484733 KIF21BO75037 1637 aa19.21■□□□□ 0.67
SCFD1-206ENST00000484733 ABCA9Q8IUA7 1624 aa19.17■□□□□ 0.66
SCFD1-206ENST00000484733 ADGRL1O94910 1474 aa19.17■□□□□ 0.66
SCFD1-206ENST00000484733 ARAP3Q8WWN8 1544 aa19.15■□□□□ 0.66
SCFD1-206ENST00000484733 EFCAB5A4FU69 1503 aa19.15■□□□□ 0.66
SCFD1-206ENST00000484733 PHLDB1Q86UU1 1377 aa19.15■□□□□ 0.66
SCFD1-206ENST00000484733 NUP153P49790 1475 aaKnown RBP19.14■□□□□ 0.65
SCFD1-206ENST00000484733 FHOD3Q2V2M9 1422 aa19.13■□□□□ 0.65
SCFD1-206ENST00000484733 ARID3CA6NKF2 412 aa19.13■□□□□ 0.65
SCFD1-206ENST00000484733 NEO1Q92859 1461 aa19.07■□□□□ 0.64
SCFD1-206ENST00000484733 CHIC1Q5VXU3 224 aa19.07■□□□□ 0.64
SCFD1-206ENST00000484733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.06■□□□□ 0.64
SCFD1-206ENST00000484733 RANGAP1P46060 587 aaPredicted RBP19.06■□□□□ 0.64
SCFD1-206ENST00000484733 HNRNPUL2Q1KMD3 747 aaKnown RBP19.06■□□□□ 0.64
SCFD1-206ENST00000484733 PLEKHD1A6NEE1 506 aa19.03■□□□□ 0.64
SCFD1-206ENST00000484733 UBTFP17480 764 aaKnown RBP18.98■□□□□ 0.63
SCFD1-206ENST00000484733 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.96■□□□□ 0.63
SCFD1-206ENST00000484733 FMN1Q68DA7 1419 aa18.96■□□□□ 0.63
SCFD1-206ENST00000484733 FRMPD1Q5SYB0 1578 aa18.96■□□□□ 0.63
SCFD1-206ENST00000484733 ARHGAP35Q9NRY4 1499 aa18.95■□□□□ 0.62
SCFD1-206ENST00000484733 CFAP74Q9C0B2 1584 aa18.95■□□□□ 0.62
SCFD1-206ENST00000484733 RAPGEF3O95398 923 aa18.95■□□□□ 0.62
SCFD1-206ENST00000484733 CDK13Q14004 1512 aaKnown RBP18.93■□□□□ 0.62
SCFD1-206ENST00000484733 AKNAQ7Z591 1439 aa18.92■□□□□ 0.62
SCFD1-206ENST00000484733 HECW1Q76N89 1606 aa18.92■□□□□ 0.62
SCFD1-206ENST00000484733 TTC37Q6PGP7 1564 aa18.91■□□□□ 0.62
SCFD1-206ENST00000484733 FANCAO15360 1455 aa18.91■□□□□ 0.62
SCFD1-206ENST00000484733 DENND4BO75064 1496 aaPredicted RBP18.91■□□□□ 0.62
SCFD1-206ENST00000484733 RICTORQ6R327 1708 aa18.9■□□□□ 0.62
SCFD1-206ENST00000484733 ADAMTSL3P82987 1691 aa18.89■□□□□ 0.61
SCFD1-206ENST00000484733 HECW2Q9P2P5 1572 aa18.88■□□□□ 0.61
SCFD1-206ENST00000484733 PLCH2O75038 1416 aa18.87■□□□□ 0.61
SCFD1-206ENST00000484733 EHMT2Q96KQ7 1210 aa18.86■□□□□ 0.61
SCFD1-206ENST00000484733 ARHGEF40Q8TER5 1519 aa18.86■□□□□ 0.61
SCFD1-206ENST00000484733 CDK11AQ9UQ88 783 aaPredicted RBP18.85■□□□□ 0.61
SCFD1-206ENST00000484733 ZMYM4Q5VZL5 1548 aa18.85■□□□□ 0.61
SCFD1-206ENST00000484733 BCORL1Q5H9F3 1711 aa18.85■□□□□ 0.61
SCFD1-206ENST00000484733 MAGI2Q86UL8 1455 aa18.82■□□□□ 0.6
SCFD1-206ENST00000484733 ATP1B4Q9UN42 357 aaPredicted RBP18.82■□□□□ 0.6
SCFD1-206ENST00000484733 PTPRMP28827 1452 aa18.81■□□□□ 0.6
SCFD1-206ENST00000484733 TROQ12816 1431 aaPredicted RBP18.81■□□□□ 0.6
SCFD1-206ENST00000484733 MYO5CQ9NQX4 1742 aa18.8■□□□□ 0.6
SCFD1-206ENST00000484733 LRRIQ1Q96JM4 1722 aa18.79■□□□□ 0.6
SCFD1-206ENST00000484733 KIF14Q15058 1648 aa18.79■□□□□ 0.6
SCFD1-206ENST00000484733 SCAPERQ9BY12 1400 aa18.78■□□□□ 0.6
SCFD1-206ENST00000484733 EFCAB2Q5VUJ9 269 aa18.78■□□□□ 0.6
SCFD1-206ENST00000484733 ZFYVE16Q7Z3T8 1539 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms