RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 PRG4Q92954 1404 aaPredicted RBP20.94■□□□□ 0.94
MSH5-216ENST00000484309 KIAA0586Q9BVV6 1533 aa20.9■□□□□ 0.94
MSH5-216ENST00000484309 JPH4Q96JJ6 628 aa20.9■□□□□ 0.94
MSH5-216ENST00000484309 RAPGEF2Q9Y4G8 1499 aa20.84■□□□□ 0.93
MSH5-216ENST00000484309 IQGAP2Q13576 1575 aa20.83■□□□□ 0.92
MSH5-216ENST00000484309 TRHP20396 242 aaPredicted RBP20.82■□□□□ 0.92
MSH5-216ENST00000484309 CTTNBP2Q8WZ74 1663 aa20.8■□□□□ 0.92
MSH5-216ENST00000484309 ADCY10Q96PN6 1610 aa20.71■□□□□ 0.91
MSH5-216ENST00000484309 PRXQ9BXM0 1461 aa20.71■□□□□ 0.91
MSH5-216ENST00000484309 TTBK1Q5TCY1 1321 aaPredicted RBP20.71■□□□□ 0.91
MSH5-216ENST00000484309 CARMIL2Q6F5E8 1435 aa20.68■□□□□ 0.9
MSH5-216ENST00000484309 DISP1Q96F81 1524 aa20.67■□□□□ 0.9
MSH5-216ENST00000484309 UGGT2Q9NYU1 1516 aa20.66■□□□□ 0.9
MSH5-216ENST00000484309 KIAA0556O60303 1618 aa20.65■□□□□ 0.9
MSH5-216ENST00000484309 FAM9AQ8IZU1 332 aaPredicted RBP20.64■□□□□ 0.89
MSH5-216ENST00000484309 KIF13AQ9H1H9 1805 aa20.64■□□□□ 0.89
MSH5-216ENST00000484309 PTPRGP23470 1445 aa20.63■□□□□ 0.89
MSH5-216ENST00000484309 CHIC1Q5VXU3 224 aa20.63■□□□□ 0.89
MSH5-216ENST00000484309 TNIKQ9UKE5 1360 aa20.62■□□□□ 0.89
MSH5-216ENST00000484309 CSRNP3Q8WYN3 585 aa20.62■□□□□ 0.89
MSH5-216ENST00000484309 EEA1Q15075 1411 aa20.61■□□□□ 0.89
MSH5-216ENST00000484309 NPM1P06748 294 aaKnown RBP eCLIP20.56■□□□□ 0.88
MSH5-216ENST00000484309 MAPKBP1O60336 1514 aa20.54■□□□□ 0.88
MSH5-216ENST00000484309 GOLGA3Q08378 1498 aa20.51■□□□□ 0.87
MSH5-216ENST00000484309 KIF21BO75037 1637 aa20.51■□□□□ 0.87
MSH5-216ENST00000484309 ABCC2Q92887 1545 aa20.5■□□□□ 0.87
MSH5-216ENST00000484309 UACAQ9BZF9 1416 aa20.5■□□□□ 0.87
MSH5-216ENST00000484309 DIP2BQ9P265 1576 aa20.5■□□□□ 0.87
MSH5-216ENST00000484309 UHRF1BP1LA0JNW5 1464 aa20.48■□□□□ 0.87
MSH5-216ENST00000484309 TSPOAP1O95153 1857 aa20.46■□□□□ 0.87
MSH5-216ENST00000484309 ABCC10Q5T3U5 1492 aa20.46■□□□□ 0.87
MSH5-216ENST00000484309 ZCCHC11Q5TAX3 1644 aaKnown RBP20.45■□□□□ 0.87
MSH5-216ENST00000484309 EHMT2Q96KQ7 1210 aa20.45■□□□□ 0.86
MSH5-216ENST00000484309 SAMD9Q5K651 1589 aa20.44■□□□□ 0.86
MSH5-216ENST00000484309 PLB1Q6P1J6 1458 aa20.43■□□□□ 0.86
MSH5-216ENST00000484309 P3H3Q8IVL6 736 aa20.43■□□□□ 0.86
MSH5-216ENST00000484309 RANGAP1P46060 587 aaPredicted RBP20.42■□□□□ 0.86
MSH5-216ENST00000484309 FAM69CQ0P6D2 419 aa20.42■□□□□ 0.86
MSH5-216ENST00000484309 ABCA8O94911 1581 aa20.41■□□□□ 0.86
MSH5-216ENST00000484309 KDM5BQ9UGL1 1544 aa20.4■□□□□ 0.86
MSH5-216ENST00000484309 ASXL2Q76L83 1435 aa20.39■□□□□ 0.85
MSH5-216ENST00000484309 FHOD3Q2V2M9 1422 aa20.31■□□□□ 0.84
MSH5-216ENST00000484309 RAPGEF6Q8TEU7 1601 aa20.31■□□□□ 0.84
MSH5-216ENST00000484309 UBTFP17480 764 aaKnown RBP20.3■□□□□ 0.84
MSH5-216ENST00000484309 PPRC1Q5VV67 1664 aaKnown RBP20.29■□□□□ 0.84
MSH5-216ENST00000484309 ARID3CA6NKF2 412 aa20.29■□□□□ 0.84
MSH5-216ENST00000484309 GLI2P10070 1586 aa20.29■□□□□ 0.84
MSH5-216ENST00000484309 EFCAB5A4FU69 1503 aa20.27■□□□□ 0.84
MSH5-216ENST00000484309 EPRSP07814 1512 aaKnown RBP20.27■□□□□ 0.84
MSH5-216ENST00000484309 WDR7Q9Y4E6 1490 aa20.25■□□□□ 0.83
MSH5-216ENST00000484309 MAP3K4Q9Y6R4 1608 aa20.25■□□□□ 0.83
MSH5-216ENST00000484309 KDM6BO15054 1643 aa20.24■□□□□ 0.83
MSH5-216ENST00000484309 ATP10BO94823 1461 aa20.2■□□□□ 0.82
MSH5-216ENST00000484309 CFAP43Q8NDM7 1665 aa20.18■□□□□ 0.82
MSH5-216ENST00000484309 NUP153P49790 1475 aaKnown RBP20.18■□□□□ 0.82
MSH5-216ENST00000484309 KCNH8Q96L42 1107 aa20.17■□□□□ 0.82
MSH5-216ENST00000484309 ARHGAP35Q9NRY4 1499 aa20.16■□□□□ 0.82
MSH5-216ENST00000484309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.13■□□□□ 0.81
MSH5-216ENST00000484309 HNRNPUL2Q1KMD3 747 aaKnown RBP20.13■□□□□ 0.81
MSH5-216ENST00000484309 TEX14Q8IWB6 1497 aa20.09■□□□□ 0.81
MSH5-216ENST00000484309 CDK13Q14004 1512 aaKnown RBP20.07■□□□□ 0.8
MSH5-216ENST00000484309 HECW1Q76N89 1606 aa20.07■□□□□ 0.8
MSH5-216ENST00000484309 ABCA9Q8IUA7 1624 aa20.07■□□□□ 0.8
MSH5-216ENST00000484309 CD109Q6YHK3 1445 aa20.07■□□□□ 0.8
MSH5-216ENST00000484309 LRRIQ1Q96JM4 1722 aa20.07■□□□□ 0.8
MSH5-216ENST00000484309 FMN1Q68DA7 1419 aa20.05■□□□□ 0.8
MSH5-216ENST00000484309 COL17A1Q9UMD9 1497 aaPredicted RBP20.04■□□□□ 0.8
MSH5-216ENST00000484309 MAGI3Q5TCQ9 1506 aa20.03■□□□□ 0.8
MSH5-216ENST00000484309 ATP1B4Q9UN42 357 aaPredicted RBP20.03■□□□□ 0.8
MSH5-216ENST00000484309 PCF11O94913 1555 aaKnown RBP20■□□□□ 0.79
MSH5-216ENST00000484309 CLIP1P30622 1438 aa19.97■□□□□ 0.79
MSH5-216ENST00000484309 PLEKHD1A6NEE1 506 aa19.97■□□□□ 0.79
MSH5-216ENST00000484309 TTC37Q6PGP7 1564 aa19.96■□□□□ 0.79
MSH5-216ENST00000484309 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.94■□□□□ 0.78
MSH5-216ENST00000484309 KIF14Q15058 1648 aa19.91■□□□□ 0.78
MSH5-216ENST00000484309 CASKIN1Q8WXD9 1431 aa19.89■□□□□ 0.77
MSH5-216ENST00000484309 AEBP2Q6ZN18 517 aaPredicted RBP19.88■□□□□ 0.77
MSH5-216ENST00000484309 MYO5CQ9NQX4 1742 aa19.88■□□□□ 0.77
MSH5-216ENST00000484309 ARAP3Q8WWN8 1544 aa19.86■□□□□ 0.77
MSH5-216ENST00000484309 NEO1Q92859 1461 aa19.86■□□□□ 0.77
MSH5-216ENST00000484309 FYCO1Q9BQS8 1478 aa19.86■□□□□ 0.77
MSH5-216ENST00000484309 CFAP74Q9C0B2 1584 aa19.85■□□□□ 0.77
MSH5-216ENST00000484309 CEP162Q5TB80 1403 aa19.85■□□□□ 0.77
MSH5-216ENST00000484309 CCDC18Q5T9S5 1454 aa19.84■□□□□ 0.77
MSH5-216ENST00000484309 FRMPD1Q5SYB0 1578 aa19.83■□□□□ 0.76
MSH5-216ENST00000484309 LOC105371045A0A1W2PR82 267 aa19.82■□□□□ 0.76
MSH5-216ENST00000484309 CDK11AQ9UQ88 783 aaPredicted RBP19.82■□□□□ 0.76
MSH5-216ENST00000484309 TROQ12816 1431 aaPredicted RBP19.82■□□□□ 0.76
MSH5-216ENST00000484309 FANCAO15360 1455 aa19.81■□□□□ 0.76
MSH5-216ENST00000484309 RICTORQ6R327 1708 aa19.8■□□□□ 0.76
MSH5-216ENST00000484309 PHLDB1Q86UU1 1377 aa19.79■□□□□ 0.76
MSH5-216ENST00000484309 AKNAQ7Z591 1439 aa19.78■□□□□ 0.76
MSH5-216ENST00000484309 RAPGEF3O95398 923 aa19.78■□□□□ 0.76
MSH5-216ENST00000484309 KDM4FA0A1W2PPD8 638 aa19.77■□□□□ 0.76
MSH5-216ENST00000484309 ADGRL1O94910 1474 aa19.77■□□□□ 0.76
MSH5-216ENST00000484309 CDC42BPBQ9Y5S2 1711 aa19.76■□□□□ 0.75
MSH5-216ENST00000484309 PLCH2O75038 1416 aa19.76■□□□□ 0.75
MSH5-216ENST00000484309 CDC42BPAQ5VT25 1732 aa19.73■□□□□ 0.75
MSH5-216ENST00000484309 DENND4BO75064 1496 aaPredicted RBP19.73■□□□□ 0.75
MSH5-216ENST00000484309 ARHGAP5Q13017 1502 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms