RNA–Protein interactions for RNA: ENST00000484141.5

PCGF3-211, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-211ENST00000484141 KIF13AQ9H1H9 1805 aa28.92■■■□□ 2.22
PCGF3-211ENST00000484141 JPH4Q96JJ6 628 aa28.89■■■□□ 2.22
PCGF3-211ENST00000484141 RUSC2Q8N2Y8 1516 aa28.86■■■□□ 2.21
PCGF3-211ENST00000484141 FAM69CQ0P6D2 419 aa28.84■■■□□ 2.21
PCGF3-211ENST00000484141 CUL7Q14999 1698 aa28.83■■■□□ 2.21
PCGF3-211ENST00000484141 NPM1P06748 294 aaKnown RBP eCLIP28.8■■■□□ 2.2
PCGF3-211ENST00000484141 ABCC10Q5T3U5 1492 aa28.79■■■□□ 2.2
PCGF3-211ENST00000484141 CARMIL1Q5VZK9 1371 aa28.76■■■□□ 2.2
PCGF3-211ENST00000484141 MAPKBP1O60336 1514 aa28.72■■■□□ 2.19
PCGF3-211ENST00000484141 KIAA0586Q9BVV6 1533 aa28.69■■■□□ 2.18
PCGF3-211ENST00000484141 DIP2BQ9P265 1576 aa28.68■■■□□ 2.18
PCGF3-211ENST00000484141 ADCY10Q96PN6 1610 aa28.65■■■□□ 2.18
PCGF3-211ENST00000484141 KDM6BO15054 1643 aa28.59■■■□□ 2.17
PCGF3-211ENST00000484141 KDM4FA0A1W2PPD8 638 aa28.59■■■□□ 2.17
PCGF3-211ENST00000484141 RAPGEF2Q9Y4G8 1499 aa28.52■■■□□ 2.16
PCGF3-211ENST00000484141 TTBK1Q5TCY1 1321 aaPredicted RBP28.5■■■□□ 2.15
PCGF3-211ENST00000484141 IQGAP2Q13576 1575 aa28.49■■■□□ 2.15
PCGF3-211ENST00000484141 TSPOAP1O95153 1857 aa28.47■■■□□ 2.15
PCGF3-211ENST00000484141 PTPRGP23470 1445 aa28.43■■■□□ 2.14
PCGF3-211ENST00000484141 DISP1Q96F81 1524 aa28.38■■■□□ 2.13
PCGF3-211ENST00000484141 TNIKQ9UKE5 1360 aa28.36■■■□□ 2.13
PCGF3-211ENST00000484141 CARMIL2Q6F5E8 1435 aa28.35■■■□□ 2.13
PCGF3-211ENST00000484141 ABCC2Q92887 1545 aa28.33■■■□□ 2.13
PCGF3-211ENST00000484141 PRXQ9BXM0 1461 aa28.33■■■□□ 2.13
PCGF3-211ENST00000484141 UGGT2Q9NYU1 1516 aa28.32■■■□□ 2.12
PCGF3-211ENST00000484141 CTTNBP2Q8WZ74 1663 aa28.3■■■□□ 2.12
PCGF3-211ENST00000484141 ASXL2Q76L83 1435 aa28.3■■■□□ 2.12
PCGF3-211ENST00000484141 ILDR1Q86SU0 546 aaPredicted RBP28.3■■■□□ 2.12
PCGF3-211ENST00000484141 PLB1Q6P1J6 1458 aa28.28■■■□□ 2.12
PCGF3-211ENST00000484141 KIAA0556O60303 1618 aa28.25■■■□□ 2.11
PCGF3-211ENST00000484141 GLI2P10070 1586 aa28.24■■■□□ 2.11
PCGF3-211ENST00000484141 ADGRL1O94910 1474 aa28.22■■■□□ 2.11
PCGF3-211ENST00000484141 PPRC1Q5VV67 1664 aaKnown RBP28.21■■■□□ 2.11
PCGF3-211ENST00000484141 UHRF1BP1LA0JNW5 1464 aa28.2■■■□□ 2.1
PCGF3-211ENST00000484141 CSRNP3Q8WYN3 585 aa28.19■■■□□ 2.1
PCGF3-211ENST00000484141 UACAQ9BZF9 1416 aa28.18■■■□□ 2.1
PCGF3-211ENST00000484141 FAM9AQ8IZU1 332 aaPredicted RBP28.16■■■□□ 2.1
PCGF3-211ENST00000484141 COL17A1Q9UMD9 1497 aaPredicted RBP28.14■■■□□ 2.09
PCGF3-211ENST00000484141 EPRSP07814 1512 aaKnown RBP28.12■■■□□ 2.09
PCGF3-211ENST00000484141 KDM5BQ9UGL1 1544 aa28.08■■■□□ 2.09
PCGF3-211ENST00000484141 TEX14Q8IWB6 1497 aa28.08■■■□□ 2.09
PCGF3-211ENST00000484141 P3H3Q8IVL6 736 aa28.06■■■□□ 2.08
PCGF3-211ENST00000484141 ZCCHC11Q5TAX3 1644 aaKnown RBP28.06■■■□□ 2.08
PCGF3-211ENST00000484141 MAP3K4Q9Y6R4 1608 aa28.06■■■□□ 2.08
PCGF3-211ENST00000484141 GOLGA3Q08378 1498 aa28.04■■■□□ 2.08
PCGF3-211ENST00000484141 CHIC1Q5VXU3 224 aa28.04■■■□□ 2.08
PCGF3-211ENST00000484141 EEA1Q15075 1411 aa28.01■■■□□ 2.07
PCGF3-211ENST00000484141 HECW2Q9P2P5 1572 aa27.99■■■□□ 2.07
PCGF3-211ENST00000484141 ABCA8O94911 1581 aa27.99■■■□□ 2.07
PCGF3-211ENST00000484141 RANGAP1P46060 587 aaPredicted RBP27.97■■■□□ 2.07
PCGF3-211ENST00000484141 WDR7Q9Y4E6 1490 aa27.94■■■□□ 2.06
PCGF3-211ENST00000484141 EHMT2Q96KQ7 1210 aa27.93■■■□□ 2.06
PCGF3-211ENST00000484141 SAMD9Q5K651 1589 aa27.91■■■□□ 2.06
PCGF3-211ENST00000484141 ARID3CA6NKF2 412 aa27.91■■■□□ 2.06
PCGF3-211ENST00000484141 KIF21BO75037 1637 aa27.86■■■□□ 2.05
PCGF3-211ENST00000484141 CD109Q6YHK3 1445 aa27.84■■■□□ 2.05
PCGF3-211ENST00000484141 KCNH8Q96L42 1107 aa27.81■■■□□ 2.04
PCGF3-211ENST00000484141 MAGI3Q5TCQ9 1506 aa27.81■■■□□ 2.04
PCGF3-211ENST00000484141 FHOD3Q2V2M9 1422 aa27.79■■■□□ 2.04
PCGF3-211ENST00000484141 ATP10BO94823 1461 aa27.77■■■□□ 2.04
PCGF3-211ENST00000484141 CFAP43Q8NDM7 1665 aa27.75■■■□□ 2.03
PCGF3-211ENST00000484141 RAPGEF6Q8TEU7 1601 aa27.74■■■□□ 2.03
PCGF3-211ENST00000484141 UBTFP17480 764 aaKnown RBP27.68■■■□□ 2.02
PCGF3-211ENST00000484141 NUP153P49790 1475 aaKnown RBP27.66■■■□□ 2.02
PCGF3-211ENST00000484141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.61■■■□□ 2.01
PCGF3-211ENST00000484141 HNRNPUL2Q1KMD3 747 aaKnown RBP27.61■■■□□ 2.01
PCGF3-211ENST00000484141 EFCAB5A4FU69 1503 aa27.61■■■□□ 2.01
PCGF3-211ENST00000484141 ARAP3Q8WWN8 1544 aa27.61■■■□□ 2.01
PCGF3-211ENST00000484141 FBXO41Q8TF61 875 aa27.58■■■□□ 2.01
PCGF3-211ENST00000484141 ARHGAP35Q9NRY4 1499 aa27.54■■■□□ 2
PCGF3-211ENST00000484141 ABCA9Q8IUA7 1624 aa27.52■■■□□ 2
PCGF3-211ENST00000484141 PTPRMP28827 1452 aa27.51■■■□□ 2
PCGF3-211ENST00000484141 PHLDB1Q86UU1 1377 aa27.5■■□□□ 1.99
PCGF3-211ENST00000484141 CDK13Q14004 1512 aaKnown RBP27.47■■□□□ 1.99
PCGF3-211ENST00000484141 RAPGEF3O95398 923 aa27.47■■□□□ 1.99
PCGF3-211ENST00000484141 ADAMTSL3P82987 1691 aa27.46■■□□□ 1.99
PCGF3-211ENST00000484141 ATP1B4Q9UN42 357 aaPredicted RBP27.42■■□□□ 1.98
PCGF3-211ENST00000484141 PLEKHD1A6NEE1 506 aa27.41■■□□□ 1.98
PCGF3-211ENST00000484141 ARID4BQ4LE39 1312 aaPredicted RBP27.41■■□□□ 1.98
PCGF3-211ENST00000484141 NEO1Q92859 1461 aa27.4■■□□□ 1.98
PCGF3-211ENST00000484141 FMN1Q68DA7 1419 aa27.36■■□□□ 1.97
PCGF3-211ENST00000484141 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.36■■□□□ 1.973e-6■■■■□ 24.5
PCGF3-211ENST00000484141 LRRIQ1Q96JM4 1722 aa27.35■■□□□ 1.97
PCGF3-211ENST00000484141 PCF11O94913 1555 aaKnown RBP27.35■■□□□ 1.97
PCGF3-211ENST00000484141 BCORL1Q5H9F3 1711 aa27.34■■□□□ 1.97
PCGF3-211ENST00000484141 TTC37Q6PGP7 1564 aa27.34■■□□□ 1.97
PCGF3-211ENST00000484141 MADDQ8WXG6 1647 aa27.34■■□□□ 1.97
PCGF3-211ENST00000484141 FRMPD1Q5SYB0 1578 aa27.33■■□□□ 1.97
PCGF3-211ENST00000484141 HECW1Q76N89 1606 aa27.32■■□□□ 1.96
PCGF3-211ENST00000484141 LMTK3Q96Q04 1460 aa27.31■■□□□ 1.96
PCGF3-211ENST00000484141 ARHGEF40Q8TER5 1519 aa27.24■■□□□ 1.95
PCGF3-211ENST00000484141 DENND4BO75064 1496 aaPredicted RBP27.23■■□□□ 1.95
PCGF3-211ENST00000484141 KIF14Q15058 1648 aa27.22■■□□□ 1.95
PCGF3-211ENST00000484141 RIMS1Q86UR5 1692 aaKnown RBP27.21■■□□□ 1.95
PCGF3-211ENST00000484141 FANCAO15360 1455 aa27.2■■□□□ 1.95
PCGF3-211ENST00000484141 PLPPR3Q6T4P5 718 aa27.2■■□□□ 1.94
PCGF3-211ENST00000484141 AKNAQ7Z591 1439 aa27.2■■□□□ 1.94
PCGF3-211ENST00000484141 HSPA2P54652 639 aa27.19■■□□□ 1.94
PCGF3-211ENST00000484141 CLIP1P30622 1438 aa27.17■■□□□ 1.94
PCGF3-211ENST00000484141 RICTORQ6R327 1708 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms