RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 RUSC2Q8N2Y8 1516 aa33.27■■■□□ 2.92
NDUFA3-213ENST00000484103 CUL7Q14999 1698 aa33.2■■■□□ 2.9
NDUFA3-213ENST00000484103 CARMIL1Q5VZK9 1371 aa33.09■■■□□ 2.89
NDUFA3-213ENST00000484103 KIAA0586Q9BVV6 1533 aa33.07■■■□□ 2.88
NDUFA3-213ENST00000484103 TTBK1Q5TCY1 1321 aaPredicted RBP33.02■■■□□ 2.88
NDUFA3-213ENST00000484103 NPM1P06748 294 aaKnown RBP eCLIP32.89■■■□□ 2.86
NDUFA3-213ENST00000484103 ADCY10Q96PN6 1610 aa32.88■■■□□ 2.85
NDUFA3-213ENST00000484103 IQGAP2Q13576 1575 aa32.84■■■□□ 2.85
NDUFA3-213ENST00000484103 KIF13AQ9H1H9 1805 aa32.81■■■□□ 2.84
NDUFA3-213ENST00000484103 RAPGEF2Q9Y4G8 1499 aa32.8■■■□□ 2.84
NDUFA3-213ENST00000484103 PTPRGP23470 1445 aa32.79■■■□□ 2.84
NDUFA3-213ENST00000484103 CARMIL2Q6F5E8 1435 aa32.77■■■□□ 2.84
NDUFA3-213ENST00000484103 FAM69CQ0P6D2 419 aa32.76■■■□□ 2.83
NDUFA3-213ENST00000484103 TNIKQ9UKE5 1360 aa32.71■■■□□ 2.83
NDUFA3-213ENST00000484103 MAPKBP1O60336 1514 aa32.69■■■□□ 2.82
NDUFA3-213ENST00000484103 ABCC10Q5T3U5 1492 aa32.67■■■□□ 2.82
NDUFA3-213ENST00000484103 DISP1Q96F81 1524 aa32.66■■■□□ 2.82
NDUFA3-213ENST00000484103 DIP2BQ9P265 1576 aa32.64■■■□□ 2.82
NDUFA3-213ENST00000484103 UGGT2Q9NYU1 1516 aa32.57■■■□□ 2.8
NDUFA3-213ENST00000484103 CTTNBP2Q8WZ74 1663 aa32.56■■■□□ 2.8
NDUFA3-213ENST00000484103 KIAA0556O60303 1618 aa32.55■■■□□ 2.8
NDUFA3-213ENST00000484103 ABCC2Q92887 1545 aa32.54■■■□□ 2.8
NDUFA3-213ENST00000484103 TSPOAP1O95153 1857 aa32.53■■■□□ 2.8
NDUFA3-213ENST00000484103 UACAQ9BZF9 1416 aa32.51■■■□□ 2.8
NDUFA3-213ENST00000484103 AEBP2Q6ZN18 517 aaPredicted RBP32.49■■■□□ 2.79
NDUFA3-213ENST00000484103 PRXQ9BXM0 1461 aa32.47■■■□□ 2.79
NDUFA3-213ENST00000484103 ASXL2Q76L83 1435 aa32.46■■■□□ 2.79
NDUFA3-213ENST00000484103 UHRF1BP1LA0JNW5 1464 aa32.44■■■□□ 2.78
NDUFA3-213ENST00000484103 FAM9AQ8IZU1 332 aaPredicted RBP32.37■■■□□ 2.77
NDUFA3-213ENST00000484103 PLB1Q6P1J6 1458 aa32.36■■■□□ 2.77
NDUFA3-213ENST00000484103 ZCCHC11Q5TAX3 1644 aaKnown RBP32.36■■■□□ 2.77
NDUFA3-213ENST00000484103 CSRNP3Q8WYN3 585 aa32.35■■■□□ 2.77
NDUFA3-213ENST00000484103 KDM6BO15054 1643 aa32.35■■■□□ 2.77
NDUFA3-213ENST00000484103 GOLGA3Q08378 1498 aa32.35■■■□□ 2.77
NDUFA3-213ENST00000484103 P3H3Q8IVL6 736 aa32.34■■■□□ 2.77
NDUFA3-213ENST00000484103 KDM5BQ9UGL1 1544 aa32.32■■■□□ 2.76
NDUFA3-213ENST00000484103 RANGAP1P46060 587 aaPredicted RBP32.28■■■□□ 2.76
NDUFA3-213ENST00000484103 ARID3CA6NKF2 412 aa32.25■■■□□ 2.75
NDUFA3-213ENST00000484103 EPRSP07814 1512 aaKnown RBP32.23■■■□□ 2.75
NDUFA3-213ENST00000484103 GLI2P10070 1586 aa32.23■■■□□ 2.75
NDUFA3-213ENST00000484103 PPRC1Q5VV67 1664 aaKnown RBP32.21■■■□□ 2.75
NDUFA3-213ENST00000484103 ABCA8O94911 1581 aa32.19■■■□□ 2.74
NDUFA3-213ENST00000484103 EHMT2Q96KQ7 1210 aa32.17■■■□□ 2.74
NDUFA3-213ENST00000484103 WDR7Q9Y4E6 1490 aa32.16■■■□□ 2.74
NDUFA3-213ENST00000484103 KCNH8Q96L42 1107 aa32.15■■■□□ 2.74
NDUFA3-213ENST00000484103 EEA1Q15075 1411 aa32.15■■■□□ 2.74
NDUFA3-213ENST00000484103 MAP3K4Q9Y6R4 1608 aa32.13■■■□□ 2.73
NDUFA3-213ENST00000484103 SAMD9Q5K651 1589 aa32.05■■■□□ 2.72
NDUFA3-213ENST00000484103 TEX14Q8IWB6 1497 aa32.01■■■□□ 2.71
NDUFA3-213ENST00000484103 COL17A1Q9UMD9 1497 aaPredicted RBP31.99■■■□□ 2.71
NDUFA3-213ENST00000484103 CHIC1Q5VXU3 224 aa31.98■■■□□ 2.71
NDUFA3-213ENST00000484103 FHOD3Q2V2M9 1422 aa31.98■■■□□ 2.71
NDUFA3-213ENST00000484103 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.97■■■□□ 2.71
NDUFA3-213ENST00000484103 HNRNPUL2Q1KMD3 747 aaKnown RBP31.97■■■□□ 2.71
NDUFA3-213ENST00000484103 CD109Q6YHK3 1445 aa31.96■■■□□ 2.71
NDUFA3-213ENST00000484103 ATP10BO94823 1461 aa31.96■■■□□ 2.71
NDUFA3-213ENST00000484103 RAPGEF6Q8TEU7 1601 aa31.94■■■□□ 2.7
NDUFA3-213ENST00000484103 KIF21BO75037 1637 aa31.93■■■□□ 2.7
NDUFA3-213ENST00000484103 KDM4FA0A1W2PPD8 638 aa31.92■■■□□ 2.7
NDUFA3-213ENST00000484103 CFAP43Q8NDM7 1665 aa31.91■■■□□ 2.7
NDUFA3-213ENST00000484103 UBTFP17480 764 aaKnown RBP31.87■■■□□ 2.69
NDUFA3-213ENST00000484103 MAGI3Q5TCQ9 1506 aa31.83■■■□□ 2.69
NDUFA3-213ENST00000484103 NUP153P49790 1475 aaKnown RBP31.81■■■□□ 2.68
NDUFA3-213ENST00000484103 EFCAB5A4FU69 1503 aa31.76■■■□□ 2.68
NDUFA3-213ENST00000484103 ADGRL1O94910 1474 aa31.75■■■□□ 2.67
NDUFA3-213ENST00000484103 ABCA9Q8IUA7 1624 aa31.71■■■□□ 2.67
NDUFA3-213ENST00000484103 ATP1B4Q9UN42 357 aaPredicted RBP31.7■■■□□ 2.67
NDUFA3-213ENST00000484103 PLEKHD1A6NEE1 506 aa31.64■■■□□ 2.66
NDUFA3-213ENST00000484103 CDK13Q14004 1512 aaKnown RBP31.62■■■□□ 2.65
NDUFA3-213ENST00000484103 ARHGAP35Q9NRY4 1499 aa31.58■■■□□ 2.65
NDUFA3-213ENST00000484103 RAPGEF3O95398 923 aa31.57■■■□□ 2.64
NDUFA3-213ENST00000484103 ARAP3Q8WWN8 1544 aa31.57■■■□□ 2.64
NDUFA3-213ENST00000484103 NEO1Q92859 1461 aa31.5■■■□□ 2.63
NDUFA3-213ENST00000484103 FMN1Q68DA7 1419 aa31.49■■■□□ 2.63
NDUFA3-213ENST00000484103 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.49■■■□□ 2.63
NDUFA3-213ENST00000484103 TTC37Q6PGP7 1564 aa31.49■■■□□ 2.63
NDUFA3-213ENST00000484103 HECW1Q76N89 1606 aa31.48■■■□□ 2.63
NDUFA3-213ENST00000484103 PHLDB1Q86UU1 1377 aa31.45■■■□□ 2.63
NDUFA3-213ENST00000484103 FRMPD1Q5SYB0 1578 aa31.43■■■□□ 2.62
NDUFA3-213ENST00000484103 FANCAO15360 1455 aa31.42■■■□□ 2.62
NDUFA3-213ENST00000484103 AKNAQ7Z591 1439 aa31.38■■■□□ 2.61
NDUFA3-213ENST00000484103 CFAP74Q9C0B2 1584 aa31.34■■■□□ 2.61
NDUFA3-213ENST00000484103 DENND4BO75064 1496 aaPredicted RBP31.34■■■□□ 2.61
NDUFA3-213ENST00000484103 ARID4BQ4LE39 1312 aaPredicted RBP31.34■■■□□ 2.61
NDUFA3-213ENST00000484103 CDK11AQ9UQ88 783 aaPredicted RBP31.31■■■□□ 2.6
NDUFA3-213ENST00000484103 LRRIQ1Q96JM4 1722 aa31.31■■■□□ 2.6
NDUFA3-213ENST00000484103 KIF14Q15058 1648 aa31.31■■■□□ 2.6
NDUFA3-213ENST00000484103 RICTORQ6R327 1708 aa31.29■■■□□ 2.6
NDUFA3-213ENST00000484103 PCF11O94913 1555 aaKnown RBP31.29■■■□□ 2.6
NDUFA3-213ENST00000484103 PLCH2O75038 1416 aa31.24■■■□□ 2.59
NDUFA3-213ENST00000484103 HECW2Q9P2P5 1572 aa31.24■■■□□ 2.59
NDUFA3-213ENST00000484103 MYO5CQ9NQX4 1742 aa31.23■■■□□ 2.59
NDUFA3-213ENST00000484103 ARHGEF40Q8TER5 1519 aa31.23■■■□□ 2.59
NDUFA3-213ENST00000484103 TROQ12816 1431 aaPredicted RBP31.23■■■□□ 2.59
NDUFA3-213ENST00000484103 CLIP1P30622 1438 aa31.22■■■□□ 2.59
NDUFA3-213ENST00000484103 SCAPERQ9BY12 1400 aa31.21■■■□□ 2.59
NDUFA3-213ENST00000484103 CASKIN1Q8WXD9 1431 aa31.18■■■□□ 2.58
NDUFA3-213ENST00000484103 YEATS2Q9ULM3 1422 aa31.17■■■□□ 2.58
NDUFA3-213ENST00000484103 ADAMTSL3P82987 1691 aa31.16■■■□□ 2.58
NDUFA3-213ENST00000484103 ARHGAP5Q13017 1502 aa31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms