RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 NUP160Q12769 1436 aa23.07■■□□□ 1.28
SRSF6-202ENST00000483871 KIAA0586Q9BVV6 1533 aa22.97■■□□□ 1.27
SRSF6-202ENST00000483871 CLASP1Q7Z460 1538 aa22.94■■□□□ 1.26
SRSF6-202ENST00000483871 RANGAP1P46060 587 aaPredicted RBP22.94■■□□□ 1.26
SRSF6-202ENST00000483871 CTTNBP2Q8WZ74 1663 aa22.93■■□□□ 1.26
SRSF6-202ENST00000483871 JPH4Q96JJ6 628 aa22.93■■□□□ 1.26
SRSF6-202ENST00000483871 IQGAP2Q13576 1575 aa22.9■■□□□ 1.26
SRSF6-202ENST00000483871 TNIKQ9UKE5 1360 aa22.89■■□□□ 1.25
SRSF6-202ENST00000483871 SHROOM2Q13796 1616 aa22.8■■□□□ 1.24
SRSF6-202ENST00000483871 PRG4Q92954 1404 aaPredicted RBP22.8■■□□□ 1.24
SRSF6-202ENST00000483871 P3H3Q8IVL6 736 aa22.78■■□□□ 1.24
SRSF6-202ENST00000483871 UGGT2Q9NYU1 1516 aa22.78■■□□□ 1.24
SRSF6-202ENST00000483871 ERCC6L2Q5T890 1561 aa22.77■■□□□ 1.24
SRSF6-202ENST00000483871 DISP1Q96F81 1524 aa22.75■■□□□ 1.23
SRSF6-202ENST00000483871 DNAJC5Q9H3Z4 198 aa22.72■■□□□ 1.23
SRSF6-202ENST00000483871 TTBK1Q5TCY1 1321 aaPredicted RBP22.71■■□□□ 1.23
SRSF6-202ENST00000483871 CEP162Q5TB80 1403 aa22.71■■□□□ 1.23
SRSF6-202ENST00000483871 CLIP1P30622 1438 aa22.7■■□□□ 1.22
SRSF6-202ENST00000483871 ARHGEF11O15085 1522 aa22.69■■□□□ 1.22
SRSF6-202ENST00000483871 CARMIL2Q6F5E8 1435 aa22.69■■□□□ 1.22
SRSF6-202ENST00000483871 ARHGAP35Q9NRY4 1499 aa22.69■■□□□ 1.22
SRSF6-202ENST00000483871 KIAA0556O60303 1618 aa22.68■■□□□ 1.22
SRSF6-202ENST00000483871 SAMD9Q5K651 1589 aa22.66■■□□□ 1.22
SRSF6-202ENST00000483871 FHOD3Q2V2M9 1422 aa22.65■■□□□ 1.22
SRSF6-202ENST00000483871 RIMBP3CA6NJZ7 1639 aa22.64■■□□□ 1.22
SRSF6-202ENST00000483871 RIMBP3BA6NNM3 1639 aa22.64■■□□□ 1.22
SRSF6-202ENST00000483871 RIMBP3Q9UFD9 1639 aa22.64■■□□□ 1.22
SRSF6-202ENST00000483871 EFCAB5A4FU69 1503 aa22.62■■□□□ 1.21
SRSF6-202ENST00000483871 ARAP1Q96P48 1450 aa22.59■■□□□ 1.21
SRSF6-202ENST00000483871 PTPRGP23470 1445 aa22.58■■□□□ 1.21
SRSF6-202ENST00000483871 CYB5RLQ6IPT4 315 aa22.57■■□□□ 1.2
SRSF6-202ENST00000483871 PLB1Q6P1J6 1458 aa22.48■■□□□ 1.19
SRSF6-202ENST00000483871 FMN1Q68DA7 1419 aa22.45■■□□□ 1.19
SRSF6-202ENST00000483871 ATP1B4Q9UN42 357 aaPredicted RBP22.44■■□□□ 1.18
SRSF6-202ENST00000483871 UACAQ9BZF9 1416 aa22.43■■□□□ 1.18
SRSF6-202ENST00000483871 ARID3CA6NKF2 412 aa22.41■■□□□ 1.18
SRSF6-202ENST00000483871 ABCA8O94911 1581 aa22.4■■□□□ 1.18
SRSF6-202ENST00000483871 VPS8Q8N3P4 1428 aa22.39■■□□□ 1.17
SRSF6-202ENST00000483871 RAPGEF6Q8TEU7 1601 aa22.37■■□□□ 1.17
SRSF6-202ENST00000483871 ADCY10Q96PN6 1610 aa22.36■■□□□ 1.17
SRSF6-202ENST00000483871 PCF11O94913 1555 aaKnown RBP22.35■■□□□ 1.17
SRSF6-202ENST00000483871 ABCC2Q92887 1545 aa22.34■■□□□ 1.17
SRSF6-202ENST00000483871 CASKIN1Q8WXD9 1431 aa22.34■■□□□ 1.17
SRSF6-202ENST00000483871 UHRF1BP1LA0JNW5 1464 aa22.33■■□□□ 1.16
SRSF6-202ENST00000483871 NUP153P49790 1475 aaKnown RBP22.33■■□□□ 1.16
SRSF6-202ENST00000483871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.29■■□□□ 1.16
SRSF6-202ENST00000483871 HNRNPUL2Q1KMD3 747 aaKnown RBP22.29■■□□□ 1.16
SRSF6-202ENST00000483871 FYCO1Q9BQS8 1478 aa22.29■■□□□ 1.16
SRSF6-202ENST00000483871 ATP10BO94823 1461 aa22.27■■□□□ 1.16
SRSF6-202ENST00000483871 HECW1Q76N89 1606 aa22.27■■□□□ 1.16
SRSF6-202ENST00000483871 NPM1P06748 294 aaKnown RBP eCLIP22.26■■□□□ 1.15
SRSF6-202ENST00000483871 LRRIQ1Q96JM4 1722 aa22.26■■□□□ 1.15
SRSF6-202ENST00000483871 CDK13Q14004 1512 aaKnown RBP22.26■■□□□ 1.15
SRSF6-202ENST00000483871 EPRSP07814 1512 aaKnown RBP22.25■■□□□ 1.15
SRSF6-202ENST00000483871 KDM5BQ9UGL1 1544 aa22.25■■□□□ 1.15
SRSF6-202ENST00000483871 ZCCHC11Q5TAX3 1644 aaKnown RBP22.22■■□□□ 1.15
SRSF6-202ENST00000483871 CCDC18Q5T9S5 1454 aa22.17■■□□□ 1.14
SRSF6-202ENST00000483871 APLP2Q06481 763 aa22.17■■□□□ 1.14
SRSF6-202ENST00000483871 PLEKHD1A6NEE1 506 aa22.14■■□□□ 1.14
SRSF6-202ENST00000483871 KANK4Q5T7N3 995 aaPredicted RBP22.14■■□□□ 1.13
SRSF6-202ENST00000483871 ASXL2Q76L83 1435 aa22.13■■□□□ 1.13
SRSF6-202ENST00000483871 PPARGC1BQ86YN6 1023 aaKnown RBP22.11■■□□□ 1.13
SRSF6-202ENST00000483871 KCNH8Q96L42 1107 aa22.11■■□□□ 1.13
SRSF6-202ENST00000483871 CDK11AQ9UQ88 783 aaPredicted RBP22.11■■□□□ 1.13
SRSF6-202ENST00000483871 TIAM1Q13009 1591 aa22.11■■□□□ 1.13
SRSF6-202ENST00000483871 MAGI3Q5TCQ9 1506 aa22.1■■□□□ 1.13
SRSF6-202ENST00000483871 MAPKBP1O60336 1514 aa22.08■■□□□ 1.12
SRSF6-202ENST00000483871 CFAP43Q8NDM7 1665 aa22.08■■□□□ 1.12
SRSF6-202ENST00000483871 MAP3K1Q13233 1512 aa22.07■■□□□ 1.12
SRSF6-202ENST00000483871 MTUS2Q5JR59 1369 aa22.06■■□□□ 1.12
SRSF6-202ENST00000483871 WDR7Q9Y4E6 1490 aa22.06■■□□□ 1.12
SRSF6-202ENST00000483871 LRRC9Q6ZRR7 1453 aa22.04■■□□□ 1.12
SRSF6-202ENST00000483871 TROQ12816 1431 aaPredicted RBP22.03■■□□□ 1.12
SRSF6-202ENST00000483871 FAM69CQ0P6D2 419 aa21.98■■□□□ 1.11
SRSF6-202ENST00000483871 EHBP1L1Q8N3D4 1523 aa21.97■■□□□ 1.11
SRSF6-202ENST00000483871 KIF14Q15058 1648 aa21.97■■□□□ 1.11
SRSF6-202ENST00000483871 ABCC10Q5T3U5 1492 aa21.96■■□□□ 1.11
SRSF6-202ENST00000483871 TRHP20396 242 aaPredicted RBP21.95■■□□□ 1.1
SRSF6-202ENST00000483871 DIP2BQ9P265 1576 aa21.92■■□□□ 1.1
SRSF6-202ENST00000483871 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.92■■□□□ 1.15e-8■■■□□ 15.9
SRSF6-202ENST00000483871 NCOA2Q15596 1464 aa21.9■■□□□ 1.1
SRSF6-202ENST00000483871 SUPT6HQ7KZ85 1726 aaKnown RBP21.89■■□□□ 1.09
SRSF6-202ENST00000483871 KIF13AQ9H1H9 1805 aa21.88■■□□□ 1.09
SRSF6-202ENST00000483871 TTC37Q6PGP7 1564 aa21.88■■□□□ 1.09
SRSF6-202ENST00000483871 GLI2P10070 1586 aa21.86■■□□□ 1.09
SRSF6-202ENST00000483871 ABCA9Q8IUA7 1624 aa21.85■■□□□ 1.09
SRSF6-202ENST00000483871 CD109Q6YHK3 1445 aa21.84■■□□□ 1.09
SRSF6-202ENST00000483871 PHLDB1Q86UU1 1377 aa21.84■■□□□ 1.09
SRSF6-202ENST00000483871 CCNB3Q8WWL7 1395 aa21.83■■□□□ 1.09
SRSF6-202ENST00000483871 GPATCH8Q9UKJ3 1502 aaKnown RBP21.82■■□□□ 1.08
SRSF6-202ENST00000483871 MAP3K4Q9Y6R4 1608 aa21.81■■□□□ 1.08
SRSF6-202ENST00000483871 TSPOAP1O95153 1857 aa21.8■■□□□ 1.08
SRSF6-202ENST00000483871 PLCH2O75038 1416 aa21.79■■□□□ 1.08
SRSF6-202ENST00000483871 CDC42BPAQ5VT25 1732 aa21.78■■□□□ 1.08
SRSF6-202ENST00000483871 CFDP1Q9UEE9 299 aaPredicted RBP21.78■■□□□ 1.08
SRSF6-202ENST00000483871 ZNF777Q9ULD5 760 aaPredicted RBP21.76■■□□□ 1.07
SRSF6-202ENST00000483871 MYO5CQ9NQX4 1742 aa21.76■■□□□ 1.07
SRSF6-202ENST00000483871 CDC42BPBQ9Y5S2 1711 aa21.76■■□□□ 1.07
SRSF6-202ENST00000483871 MYOM3Q5VTT5 1437 aa21.75■■□□□ 1.07
SRSF6-202ENST00000483871 ZNF644Q9H582 1327 aaPredicted RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms