RNA–Protein interactions for RNA: ENST00000483713.5

POLR2F-209, Transcript of RNA polymerase II subunit F, humanhuman

TSL 3

Gene POLR2F, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-209ENST00000483713 KIAA0586Q9BVV6 1533 aa25.74■■□□□ 1.71
POLR2F-209ENST00000483713 TNIKQ9UKE5 1360 aa25.74■■□□□ 1.71
POLR2F-209ENST00000483713 LOC105371045A0A1W2PR82 267 aa25.72■■□□□ 1.71
POLR2F-209ENST00000483713 IQGAP2Q13576 1575 aa25.71■■□□□ 1.71
POLR2F-209ENST00000483713 CLASP1Q7Z460 1538 aa25.69■■□□□ 1.7
POLR2F-209ENST00000483713 OSCARQ8IYS5 282 aa25.68■■□□□ 1.7
POLR2F-209ENST00000483713 UGGT2Q9NYU1 1516 aa25.59■■□□□ 1.69
POLR2F-209ENST00000483713 SHROOM2Q13796 1616 aa25.59■■□□□ 1.69
POLR2F-209ENST00000483713 EFCAB5A4FU69 1503 aa25.54■■□□□ 1.68
POLR2F-209ENST00000483713 CEP162Q5TB80 1403 aa25.53■■□□□ 1.68
POLR2F-209ENST00000483713 JPH4Q96JJ6 628 aa25.52■■□□□ 1.68
POLR2F-209ENST00000483713 SAMD9Q5K651 1589 aa25.51■■□□□ 1.67
POLR2F-209ENST00000483713 DNAJC5Q9H3Z4 198 aa25.5■■□□□ 1.67
POLR2F-209ENST00000483713 CLIP1P30622 1438 aa25.49■■□□□ 1.67
POLR2F-209ENST00000483713 CARMIL2Q6F5E8 1435 aa25.46■■□□□ 1.67
POLR2F-209ENST00000483713 KIAA0556O60303 1618 aa25.45■■□□□ 1.67
POLR2F-209ENST00000483713 PRG4Q92954 1404 aaPredicted RBP25.45■■□□□ 1.66
POLR2F-209ENST00000483713 DISP1Q96F81 1524 aa25.44■■□□□ 1.66
POLR2F-209ENST00000483713 ARHGAP35Q9NRY4 1499 aa25.43■■□□□ 1.66
POLR2F-209ENST00000483713 RANGAP1P46060 587 aaPredicted RBP25.42■■□□□ 1.66
POLR2F-209ENST00000483713 ERCC6L2Q5T890 1561 aa25.33■■□□□ 1.65
POLR2F-209ENST00000483713 FHOD3Q2V2M9 1422 aa25.32■■□□□ 1.64
POLR2F-209ENST00000483713 ARAP1Q96P48 1450 aa25.32■■□□□ 1.64
POLR2F-209ENST00000483713 ARHGEF11O15085 1522 aa25.3■■□□□ 1.64
POLR2F-209ENST00000483713 P3H3Q8IVL6 736 aa25.28■■□□□ 1.64
POLR2F-209ENST00000483713 FMN1Q68DA7 1419 aa25.27■■□□□ 1.64
POLR2F-209ENST00000483713 RIMBP3CA6NJZ7 1639 aa25.23■■□□□ 1.63
POLR2F-209ENST00000483713 RIMBP3BA6NNM3 1639 aa25.23■■□□□ 1.63
POLR2F-209ENST00000483713 RIMBP3Q9UFD9 1639 aa25.23■■□□□ 1.63
POLR2F-209ENST00000483713 PTPRGP23470 1445 aa25.23■■□□□ 1.63
POLR2F-209ENST00000483713 VPS8Q8N3P4 1428 aa25.2■■□□□ 1.63
POLR2F-209ENST00000483713 RAPGEF6Q8TEU7 1601 aa25.13■■□□□ 1.61
POLR2F-209ENST00000483713 ABCA8O94911 1581 aa25.13■■□□□ 1.61
POLR2F-209ENST00000483713 FYCO1Q9BQS8 1478 aa25.12■■□□□ 1.61
POLR2F-209ENST00000483713 PCF11O94913 1555 aaKnown RBP25.12■■□□□ 1.61
POLR2F-209ENST00000483713 CASKIN1Q8WXD9 1431 aa25.12■■□□□ 1.61
POLR2F-209ENST00000483713 TTBK1Q5TCY1 1321 aaPredicted RBP25.1■■□□□ 1.61
POLR2F-209ENST00000483713 HECW1Q76N89 1606 aa25.09■■□□□ 1.61
POLR2F-209ENST00000483713 UACAQ9BZF9 1416 aa25.09■■□□□ 1.61
POLR2F-209ENST00000483713 PLB1Q6P1J6 1458 aa25.09■■□□□ 1.61
POLR2F-209ENST00000483713 UHRF1BP1LA0JNW5 1464 aa25.07■■□□□ 1.6
POLR2F-209ENST00000483713 ABCC2Q92887 1545 aa25.07■■□□□ 1.6
POLR2F-209ENST00000483713 NUP153P49790 1475 aaKnown RBP25.01■■□□□ 1.59
POLR2F-209ENST00000483713 ADCY10Q96PN6 1610 aa25■■□□□ 1.59
POLR2F-209ENST00000483713 CCDC18Q5T9S5 1454 aa24.99■■□□□ 1.59
POLR2F-209ENST00000483713 EPRSP07814 1512 aaKnown RBP24.96■■□□□ 1.59
POLR2F-209ENST00000483713 CYB5RLQ6IPT4 315 aa24.95■■□□□ 1.58
POLR2F-209ENST00000483713 LRRIQ1Q96JM4 1722 aa24.95■■□□□ 1.58
POLR2F-209ENST00000483713 ATP1B4Q9UN42 357 aaPredicted RBP24.94■■□□□ 1.58
POLR2F-209ENST00000483713 MAP3K1Q13233 1512 aa24.94■■□□□ 1.58
POLR2F-209ENST00000483713 KDM5BQ9UGL1 1544 aa24.93■■□□□ 1.58
POLR2F-209ENST00000483713 CFAP43Q8NDM7 1665 aa24.93■■□□□ 1.58
POLR2F-209ENST00000483713 TIAM1Q13009 1591 aa24.89■■□□□ 1.58
POLR2F-209ENST00000483713 APLP2Q06481 763 aa24.89■■□□□ 1.58
POLR2F-209ENST00000483713 ATP10BO94823 1461 aa24.89■■□□□ 1.57
POLR2F-209ENST00000483713 ZCCHC11Q5TAX3 1644 aaKnown RBP24.88■■□□□ 1.57
POLR2F-209ENST00000483713 CDK13Q14004 1512 aaKnown RBP24.87■■□□□ 1.57
POLR2F-209ENST00000483713 NPM1P06748 294 aaKnown RBP eCLIP24.83■■□□□ 1.57
POLR2F-209ENST00000483713 CDK11AQ9UQ88 783 aaPredicted RBP24.81■■□□□ 1.56
POLR2F-209ENST00000483713 ARID3CA6NKF2 412 aa24.8■■□□□ 1.56
POLR2F-209ENST00000483713 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.79■■□□□ 1.56
POLR2F-209ENST00000483713 HNRNPUL2Q1KMD3 747 aaKnown RBP24.79■■□□□ 1.56
POLR2F-209ENST00000483713 EHBP1L1Q8N3D4 1523 aa24.76■■□□□ 1.55
POLR2F-209ENST00000483713 LRRC9Q6ZRR7 1453 aa24.76■■□□□ 1.55
POLR2F-209ENST00000483713 MAPKBP1O60336 1514 aa24.76■■□□□ 1.55
POLR2F-209ENST00000483713 TROQ12816 1431 aaPredicted RBP24.73■■□□□ 1.55
POLR2F-209ENST00000483713 MTUS2Q5JR59 1369 aa24.73■■□□□ 1.55
POLR2F-209ENST00000483713 MAGI3Q5TCQ9 1506 aa24.72■■□□□ 1.55
POLR2F-209ENST00000483713 PLEKHD1A6NEE1 506 aa24.72■■□□□ 1.55
POLR2F-209ENST00000483713 WDR7Q9Y4E6 1490 aa24.7■■□□□ 1.55
POLR2F-209ENST00000483713 ASXL2Q76L83 1435 aa24.7■■□□□ 1.55
POLR2F-209ENST00000483713 KANK4Q5T7N3 995 aaPredicted RBP24.67■■□□□ 1.54
POLR2F-209ENST00000483713 KIF14Q15058 1648 aa24.66■■□□□ 1.54
POLR2F-209ENST00000483713 SUPT6HQ7KZ85 1726 aaKnown RBP24.66■■□□□ 1.54
POLR2F-209ENST00000483713 NCOA2Q15596 1464 aa24.58■■□□□ 1.52
POLR2F-209ENST00000483713 ABCC10Q5T3U5 1492 aa24.54■■□□□ 1.52
POLR2F-209ENST00000483713 ABCA9Q8IUA7 1624 aa24.53■■□□□ 1.52
POLR2F-209ENST00000483713 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.53■■□□□ 1.529e-7■■■■■ 32.7
POLR2F-209ENST00000483713 GLI2P10070 1586 aa24.53■■□□□ 1.52
POLR2F-209ENST00000483713 DIP2BQ9P265 1576 aa24.52■■□□□ 1.52
POLR2F-209ENST00000483713 PPARGC1BQ86YN6 1023 aaKnown RBP24.52■■□□□ 1.52
POLR2F-209ENST00000483713 KCNH8Q96L42 1107 aa24.52■■□□□ 1.52
POLR2F-209ENST00000483713 TTC37Q6PGP7 1564 aa24.51■■□□□ 1.51
POLR2F-209ENST00000483713 ITSN2Q9NZM3 1697 aa24.5■■□□□ 1.51
POLR2F-209ENST00000483713 CCNB3Q8WWL7 1395 aa24.48■■□□□ 1.51
POLR2F-209ENST00000483713 MYO5CQ9NQX4 1742 aa24.47■■□□□ 1.51
POLR2F-209ENST00000483713 CDC42BPAQ5VT25 1732 aa24.46■■□□□ 1.51
POLR2F-209ENST00000483713 MYOM3Q5VTT5 1437 aa24.44■■□□□ 1.5
POLR2F-209ENST00000483713 PHLDB1Q86UU1 1377 aa24.44■■□□□ 1.5
POLR2F-209ENST00000483713 PREX2Q70Z35 1606 aa24.44■■□□□ 1.5
POLR2F-209ENST00000483713 ARAP3Q8WWN8 1544 aa24.44■■□□□ 1.5
POLR2F-209ENST00000483713 MAP3K4Q9Y6R4 1608 aa24.43■■□□□ 1.5
POLR2F-209ENST00000483713 KIF13AQ9H1H9 1805 aa24.43■■□□□ 1.5
POLR2F-209ENST00000483713 GPATCH8Q9UKJ3 1502 aaKnown RBP24.43■■□□□ 1.5
POLR2F-209ENST00000483713 MIA2Q96PC5 1412 aa24.4■■□□□ 1.5
POLR2F-209ENST00000483713 PLCH2O75038 1416 aa24.39■■□□□ 1.5
POLR2F-209ENST00000483713 FAM69CQ0P6D2 419 aa24.39■■□□□ 1.49
POLR2F-209ENST00000483713 CD109Q6YHK3 1445 aa24.38■■□□□ 1.49
POLR2F-209ENST00000483713 CDC42BPBQ9Y5S2 1711 aa24.38■■□□□ 1.49
POLR2F-209ENST00000483713 FGD6Q6ZV73 1430 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms