RNA–Protein interactions for RNA: ENST00000483281.5

RXRB-204, Transcript of retinoid X receptor beta, humanhuman

TSL 5

Gene RXRB, Length 1,977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-204ENST00000483281 OSCARQ8IYS5 282 aa33.63■■■□□ 2.97
RXRB-204ENST00000483281 CTTNBP2Q8WZ74 1663 aa33.62■■■□□ 2.97
RXRB-204ENST00000483281 TNIKQ9UKE5 1360 aa33.62■■■□□ 2.97
RXRB-204ENST00000483281 KIAA0586Q9BVV6 1533 aa33.61■■■□□ 2.97
RXRB-204ENST00000483281 CLASP1Q7Z460 1538 aa33.51■■■□□ 2.96
RXRB-204ENST00000483281 IQGAP2Q13576 1575 aa33.5■■■□□ 2.95
RXRB-204ENST00000483281 JPH4Q96JJ6 628 aa33.41■■■□□ 2.94
RXRB-204ENST00000483281 UGGT2Q9NYU1 1516 aa33.38■■■□□ 2.93
RXRB-204ENST00000483281 SHROOM2Q13796 1616 aa33.38■■■□□ 2.93
RXRB-204ENST00000483281 CEP162Q5TB80 1403 aa33.28■■■□□ 2.92
RXRB-204ENST00000483281 EFCAB5A4FU69 1503 aa33.25■■■□□ 2.91
RXRB-204ENST00000483281 SAMD9Q5K651 1589 aa33.24■■■□□ 2.91
RXRB-204ENST00000483281 CLIP1P30622 1438 aa33.24■■■□□ 2.91
RXRB-204ENST00000483281 PRG4Q92954 1404 aaPredicted RBP33.23■■■□□ 2.91
RXRB-204ENST00000483281 DISP1Q96F81 1524 aa33.22■■■□□ 2.91
RXRB-204ENST00000483281 RANGAP1P46060 587 aaPredicted RBP33.21■■■□□ 2.91
RXRB-204ENST00000483281 CARMIL2Q6F5E8 1435 aa33.21■■■□□ 2.91
RXRB-204ENST00000483281 ARHGAP35Q9NRY4 1499 aa33.19■■■□□ 2.9
RXRB-204ENST00000483281 KIAA0556O60303 1618 aa33.16■■■□□ 2.9
RXRB-204ENST00000483281 ERCC6L2Q5T890 1561 aa33.08■■■□□ 2.89
RXRB-204ENST00000483281 P3H3Q8IVL6 736 aa33.07■■■□□ 2.88
RXRB-204ENST00000483281 ARAP1Q96P48 1450 aa33.03■■■□□ 2.88
RXRB-204ENST00000483281 FHOD3Q2V2M9 1422 aa33.02■■■□□ 2.88
RXRB-204ENST00000483281 ARHGEF11O15085 1522 aa33.01■■■□□ 2.87
RXRB-204ENST00000483281 PTPRGP23470 1445 aa32.95■■■□□ 2.87
RXRB-204ENST00000483281 FMN1Q68DA7 1419 aa32.94■■■□□ 2.86
RXRB-204ENST00000483281 RIMBP3CA6NJZ7 1639 aa32.93■■■□□ 2.86
RXRB-204ENST00000483281 RIMBP3BA6NNM3 1639 aa32.93■■■□□ 2.86
RXRB-204ENST00000483281 RIMBP3Q9UFD9 1639 aa32.93■■■□□ 2.86
RXRB-204ENST00000483281 DNAJC5Q9H3Z4 198 aa32.89■■■□□ 2.86
RXRB-204ENST00000483281 VPS8Q8N3P4 1428 aa32.85■■■□□ 2.85
RXRB-204ENST00000483281 TTBK1Q5TCY1 1321 aaPredicted RBP32.81■■■□□ 2.84
RXRB-204ENST00000483281 ABCA8O94911 1581 aa32.78■■■□□ 2.84
RXRB-204ENST00000483281 CASKIN1Q8WXD9 1431 aa32.77■■■□□ 2.84
RXRB-204ENST00000483281 UACAQ9BZF9 1416 aa32.76■■■□□ 2.84
RXRB-204ENST00000483281 RAPGEF6Q8TEU7 1601 aa32.75■■■□□ 2.83
RXRB-204ENST00000483281 PLB1Q6P1J6 1458 aa32.75■■■□□ 2.83
RXRB-204ENST00000483281 UHRF1BP1LA0JNW5 1464 aa32.72■■■□□ 2.83
RXRB-204ENST00000483281 FYCO1Q9BQS8 1478 aa32.71■■■□□ 2.83
RXRB-204ENST00000483281 PCF11O94913 1555 aaKnown RBP32.69■■■□□ 2.82
RXRB-204ENST00000483281 ABCC2Q92887 1545 aa32.68■■■□□ 2.82
RXRB-204ENST00000483281 CYB5RLQ6IPT4 315 aa32.67■■■□□ 2.82
RXRB-204ENST00000483281 HECW1Q76N89 1606 aa32.66■■■□□ 2.82
RXRB-204ENST00000483281 NUP153P49790 1475 aaKnown RBP32.63■■■□□ 2.81
RXRB-204ENST00000483281 ADCY10Q96PN6 1610 aa32.6■■■□□ 2.81
RXRB-204ENST00000483281 ATP1B4Q9UN42 357 aaPredicted RBP32.59■■■□□ 2.81
RXRB-204ENST00000483281 EPRSP07814 1512 aaKnown RBP32.56■■■□□ 2.8
RXRB-204ENST00000483281 LRRIQ1Q96JM4 1722 aa32.55■■■□□ 2.8
RXRB-204ENST00000483281 KDM5BQ9UGL1 1544 aa32.55■■■□□ 2.8
RXRB-204ENST00000483281 CCDC18Q5T9S5 1454 aa32.54■■■□□ 2.8
RXRB-204ENST00000483281 MAP3K1Q13233 1512 aa32.54■■■□□ 2.8
RXRB-204ENST00000483281 ATP10BO94823 1461 aa32.53■■■□□ 2.8
RXRB-204ENST00000483281 APLP2Q06481 763 aa32.49■■■□□ 2.79
RXRB-204ENST00000483281 NPM1P06748 294 aaKnown RBP eCLIP32.45■■■□□ 2.79
RXRB-204ENST00000483281 ZCCHC11Q5TAX3 1644 aaKnown RBP32.44■■■□□ 2.78
RXRB-204ENST00000483281 CDK13Q14004 1512 aaKnown RBP32.44■■■□□ 2.78
RXRB-204ENST00000483281 TIAM1Q13009 1591 aa32.44■■■□□ 2.78
RXRB-204ENST00000483281 CFAP43Q8NDM7 1665 aa32.43■■■□□ 2.78
RXRB-204ENST00000483281 CDK11AQ9UQ88 783 aaPredicted RBP32.41■■■□□ 2.78
RXRB-204ENST00000483281 ARID3CA6NKF2 412 aa32.4■■■□□ 2.78
RXRB-204ENST00000483281 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.39■■■□□ 2.78
RXRB-204ENST00000483281 HNRNPUL2Q1KMD3 747 aaKnown RBP32.39■■■□□ 2.78
RXRB-204ENST00000483281 PLEKHD1A6NEE1 506 aa32.34■■■□□ 2.77
RXRB-204ENST00000483281 LRRC9Q6ZRR7 1453 aa32.3■■■□□ 2.76
RXRB-204ENST00000483281 KANK4Q5T7N3 995 aaPredicted RBP32.28■■■□□ 2.76
RXRB-204ENST00000483281 MAPKBP1O60336 1514 aa32.28■■■□□ 2.76
RXRB-204ENST00000483281 MAGI3Q5TCQ9 1506 aa32.27■■■□□ 2.76
RXRB-204ENST00000483281 TROQ12816 1431 aaPredicted RBP32.25■■■□□ 2.75
RXRB-204ENST00000483281 MTUS2Q5JR59 1369 aa32.25■■■□□ 2.75
RXRB-204ENST00000483281 ASXL2Q76L83 1435 aa32.25■■■□□ 2.75
RXRB-204ENST00000483281 EHBP1L1Q8N3D4 1523 aa32.23■■■□□ 2.75
RXRB-204ENST00000483281 WDR7Q9Y4E6 1490 aa32.22■■■□□ 2.75
RXRB-204ENST00000483281 SUPT6HQ7KZ85 1726 aaKnown RBP32.12■■■□□ 2.73
RXRB-204ENST00000483281 KCNH8Q96L42 1107 aa32.1■■■□□ 2.73
RXRB-204ENST00000483281 KIF14Q15058 1648 aa32.09■■■□□ 2.73
RXRB-204ENST00000483281 PPARGC1BQ86YN6 1023 aaKnown RBP32.08■■■□□ 2.73
RXRB-204ENST00000483281 NCOA2Q15596 1464 aa32.05■■■□□ 2.72
RXRB-204ENST00000483281 ABCC10Q5T3U5 1492 aa32.03■■■□□ 2.72
RXRB-204ENST00000483281 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.01■■■□□ 2.72
RXRB-204ENST00000483281 GLI2P10070 1586 aa32.01■■■□□ 2.71
RXRB-204ENST00000483281 ABCA9Q8IUA7 1624 aa31.99■■■□□ 2.71
RXRB-204ENST00000483281 DIP2BQ9P265 1576 aa31.96■■■□□ 2.71
RXRB-204ENST00000483281 CCNB3Q8WWL7 1395 aa31.94■■■□□ 2.7
RXRB-204ENST00000483281 TTC37Q6PGP7 1564 aa31.93■■■□□ 2.7
RXRB-204ENST00000483281 PHLDB1Q86UU1 1377 aa31.91■■■□□ 2.7
RXRB-204ENST00000483281 GPATCH8Q9UKJ3 1502 aaKnown RBP31.91■■■□□ 2.7
RXRB-204ENST00000483281 FAM69CQ0P6D2 419 aa31.9■■■□□ 2.7
RXRB-204ENST00000483281 KIF13AQ9H1H9 1805 aa31.9■■■□□ 2.7
RXRB-204ENST00000483281 CDC42BPAQ5VT25 1732 aa31.89■■■□□ 2.7
RXRB-204ENST00000483281 MYOM3Q5VTT5 1437 aa31.88■■■□□ 2.69
RXRB-204ENST00000483281 MYO5CQ9NQX4 1742 aa31.88■■■□□ 2.69
RXRB-204ENST00000483281 PLCH2O75038 1416 aa31.87■■■□□ 2.69
RXRB-204ENST00000483281 ITSN2Q9NZM3 1697 aa31.87■■■□□ 2.69
RXRB-204ENST00000483281 MAP3K4Q9Y6R4 1608 aa31.87■■■□□ 2.69
RXRB-204ENST00000483281 ARAP3Q8WWN8 1544 aa31.86■■■□□ 2.69
RXRB-204ENST00000483281 CD109Q6YHK3 1445 aa31.85■■■□□ 2.69
RXRB-204ENST00000483281 MIA2Q96PC5 1412 aa31.84■■■□□ 2.69
RXRB-204ENST00000483281 PREX2Q70Z35 1606 aa31.84■■■□□ 2.69
RXRB-204ENST00000483281 CDC42BPBQ9Y5S2 1711 aa31.83■■■□□ 2.69
RXRB-204ENST00000483281 CFDP1Q9UEE9 299 aaPredicted RBP31.79■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms