RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 CYB5RLQ6IPT4 315 aa13.61□□□□□ -0.23
CCNC-204ENST00000482541 SLC4A1APQ9BWU0 796 aaKnown RBP13.61□□□□□ -0.23
CCNC-204ENST00000482541 SYNJ1O43426 1573 aa13.61□□□□□ -0.23
CCNC-204ENST00000482541 CLASP1Q7Z460 1538 aa13.58□□□□□ -0.24
CCNC-204ENST00000482541 CNKSR2Q8WXI2 1034 aa13.58□□□□□ -0.24
CCNC-204ENST00000482541 ARAP1Q96P48 1450 aa13.54□□□□□ -0.24
CCNC-204ENST00000482541 ERICH3Q5RHP9 1530 aa13.52□□□□□ -0.24
CCNC-204ENST00000482541 GRIN2AQ12879 1464 aa13.52□□□□□ -0.25
CCNC-204ENST00000482541 FHAD1B1AJZ9 1412 aa13.52□□□□□ -0.25
CCNC-204ENST00000482541 ADAMTS12P58397 1594 aa13.5□□□□□ -0.25
CCNC-204ENST00000482541 NUP160Q12769 1436 aa13.48□□□□□ -0.25
CCNC-204ENST00000482541 MAPK8IP2Q13387 824 aaPredicted RBP13.45□□□□□ -0.26
CCNC-204ENST00000482541 CEP170Q5SW79 1584 aa13.44□□□□□ -0.26
CCNC-204ENST00000482541 KIF27Q86VH2 1401 aa13.42□□□□□ -0.26
CCNC-204ENST00000482541 TRHP20396 242 aaPredicted RBP13.4□□□□□ -0.26
CCNC-204ENST00000482541 IGF1RP08069 1367 aa13.4□□□□□ -0.26
CCNC-204ENST00000482541 JPH4Q96JJ6 628 aa13.39□□□□□ -0.27
CCNC-204ENST00000482541 SHROOM2Q13796 1616 aa13.38□□□□□ -0.27
CCNC-204ENST00000482541 CSRNP3Q8WYN3 585 aa13.37□□□□□ -0.27
CCNC-204ENST00000482541 ERCC6L2Q5T890 1561 aa13.36□□□□□ -0.27
CCNC-204ENST00000482541 CUL7Q14999 1698 aa13.34□□□□□ -0.27
CCNC-204ENST00000482541 PRG4Q92954 1404 aaPredicted RBP13.33□□□□□ -0.28
CCNC-204ENST00000482541 KIAA0586Q9BVV6 1533 aa13.31□□□□□ -0.28
CCNC-204ENST00000482541 CARMIL1Q5VZK9 1371 aa13.31□□□□□ -0.28
CCNC-204ENST00000482541 RUSC2Q8N2Y8 1516 aa13.3□□□□□ -0.28
CCNC-204ENST00000482541 NPM1P06748 294 aaKnown RBP eCLIP13.21□□□□□ -0.3
CCNC-204ENST00000482541 RNF216Q9NWF9 866 aaPredicted RBP13.21□□□□□ -0.3
CCNC-204ENST00000482541 RAPGEF2Q9Y4G8 1499 aa13.2□□□□□ -0.3
CCNC-204ENST00000482541 CARMIL2Q6F5E8 1435 aa13.18□□□□□ -0.3
CCNC-204ENST00000482541 DMRT2Q9Y5R5 561 aa13.16□□□□□ -0.3
CCNC-204ENST00000482541 IQGAP2Q13576 1575 aa13.16□□□□□ -0.3
CCNC-204ENST00000482541 PTPRGP23470 1445 aa13.16□□□□□ -0.3
CCNC-204ENST00000482541 TNIKQ9UKE5 1360 aa13.15□□□□□ -0.31
CCNC-204ENST00000482541 ADCY10Q96PN6 1610 aa13.14□□□□□ -0.31
CCNC-204ENST00000482541 ZBTB22O15209 634 aa13.13□□□□□ -0.31
CCNC-204ENST00000482541 MAPKBP1O60336 1514 aa13.13□□□□□ -0.31
CCNC-204ENST00000482541 KIF13AQ9H1H9 1805 aa13.11□□□□□ -0.31
CCNC-204ENST00000482541 ABCC10Q5T3U5 1492 aa13.1□□□□□ -0.31
CCNC-204ENST00000482541 UGGT2Q9NYU1 1516 aa13.1□□□□□ -0.31
CCNC-204ENST00000482541 FAM69CQ0P6D2 419 aa13.1□□□□□ -0.31
CCNC-204ENST00000482541 DISP1Q96F81 1524 aa13.09□□□□□ -0.31
CCNC-204ENST00000482541 PRXQ9BXM0 1461 aa13.09□□□□□ -0.31
CCNC-204ENST00000482541 TTBK1Q5TCY1 1321 aaPredicted RBP13.09□□□□□ -0.31
CCNC-204ENST00000482541 UHRF1BP1LA0JNW5 1464 aa13.07□□□□□ -0.32
CCNC-204ENST00000482541 UACAQ9BZF9 1416 aa13.06□□□□□ -0.32
CCNC-204ENST00000482541 ABCC2Q92887 1545 aa13.06□□□□□ -0.32
CCNC-204ENST00000482541 HOXD11P31277 338 aaPredicted RBP13.05□□□□□ -0.32
CCNC-204ENST00000482541 CTTNBP2Q8WZ74 1663 aa13.05□□□□□ -0.32
CCNC-204ENST00000482541 DIP2BQ9P265 1576 aa13.04□□□□□ -0.32
CCNC-204ENST00000482541 KIAA0556O60303 1618 aa13.04□□□□□ -0.32
CCNC-204ENST00000482541 GOLGA3Q08378 1498 aa13.03□□□□□ -0.32
CCNC-204ENST00000482541 EEA1Q15075 1411 aa13.01□□□□□ -0.33
CCNC-204ENST00000482541 PLB1Q6P1J6 1458 aa13.01□□□□□ -0.33
CCNC-204ENST00000482541 KDM5BQ9UGL1 1544 aa13□□□□□ -0.33
CCNC-204ENST00000482541 ASXL2Q76L83 1435 aa13□□□□□ -0.33
CCNC-204ENST00000482541 FAM9AQ8IZU1 332 aaPredicted RBP12.98□□□□□ -0.33
CCNC-204ENST00000482541 FOXD4L1Q9NU39 408 aa12.96□□□□□ -0.34
CCNC-204ENST00000482541 GLI2P10070 1586 aa12.95□□□□□ -0.34
CCNC-204ENST00000482541 ZCCHC11Q5TAX3 1644 aaKnown RBP12.93□□□□□ -0.34
CCNC-204ENST00000482541 TSPOAP1O95153 1857 aa12.93□□□□□ -0.34
CCNC-204ENST00000482541 ABCA8O94911 1581 aa12.92□□□□□ -0.34
CCNC-204ENST00000482541 EPRSP07814 1512 aaKnown RBP12.91□□□□□ -0.34
CCNC-204ENST00000482541 P3H3Q8IVL6 736 aa12.91□□□□□ -0.34
CCNC-204ENST00000482541 KDM6BO15054 1643 aa12.9□□□□□ -0.34
CCNC-204ENST00000482541 WDR7Q9Y4E6 1490 aa12.89□□□□□ -0.35
CCNC-204ENST00000482541 SAMD9Q5K651 1589 aa12.87□□□□□ -0.35
CCNC-204ENST00000482541 MAP3K4Q9Y6R4 1608 aa12.87□□□□□ -0.35
CCNC-204ENST00000482541 PPRC1Q5VV67 1664 aaKnown RBP12.87□□□□□ -0.35
CCNC-204ENST00000482541 KIF21BO75037 1637 aa12.86□□□□□ -0.35
CCNC-204ENST00000482541 TEX14Q8IWB6 1497 aa12.85□□□□□ -0.35
CCNC-204ENST00000482541 KCNH8Q96L42 1107 aa12.85□□□□□ -0.35
CCNC-204ENST00000482541 ATP10BO94823 1461 aa12.84□□□□□ -0.35
CCNC-204ENST00000482541 RANGAP1P46060 587 aaPredicted RBP12.82□□□□□ -0.36
CCNC-204ENST00000482541 CD109Q6YHK3 1445 aa12.82□□□□□ -0.36
CCNC-204ENST00000482541 RAPGEF6Q8TEU7 1601 aa12.8□□□□□ -0.36
CCNC-204ENST00000482541 CFAP43Q8NDM7 1665 aa12.8□□□□□ -0.36
CCNC-204ENST00000482541 MAGI3Q5TCQ9 1506 aa12.8□□□□□ -0.36
CCNC-204ENST00000482541 ARID3CA6NKF2 412 aa12.79□□□□□ -0.36
CCNC-204ENST00000482541 UBTFP17480 764 aaKnown RBP12.79□□□□□ -0.36
CCNC-204ENST00000482541 COL17A1Q9UMD9 1497 aaPredicted RBP12.79□□□□□ -0.36
CCNC-204ENST00000482541 EFCAB5A4FU69 1503 aa12.79□□□□□ -0.36
CCNC-204ENST00000482541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.78□□□□□ -0.36
CCNC-204ENST00000482541 SLC4A2P04920 1241 aa12.78□□□□□ -0.36
CCNC-204ENST00000482541 HNRNPUL2Q1KMD3 747 aaKnown RBP12.78□□□□□ -0.36
CCNC-204ENST00000482541 FHOD3Q2V2M9 1422 aa12.78□□□□□ -0.36
CCNC-204ENST00000482541 NUP153P49790 1475 aaKnown RBP12.76□□□□□ -0.37
CCNC-204ENST00000482541 KDM4FA0A1W2PPD8 638 aa12.74□□□□□ -0.37
CCNC-204ENST00000482541 PLEKHD1A6NEE1 506 aa12.74□□□□□ -0.37
CCNC-204ENST00000482541 PHLDB1Q86UU1 1377 aa12.73□□□□□ -0.37
CCNC-204ENST00000482541 ABCA9Q8IUA7 1624 aa12.73□□□□□ -0.37
CCNC-204ENST00000482541 ARAP3Q8WWN8 1544 aa12.71□□□□□ -0.38
CCNC-204ENST00000482541 FMN1Q68DA7 1419 aa12.7□□□□□ -0.38
CCNC-204ENST00000482541 ARHGAP35Q9NRY4 1499 aa12.68□□□□□ -0.38
CCNC-204ENST00000482541 NEO1Q92859 1461 aa12.67□□□□□ -0.38
CCNC-204ENST00000482541 ATP1B4Q9UN42 357 aaPredicted RBP12.65□□□□□ -0.38
CCNC-204ENST00000482541 CDK11AQ9UQ88 783 aaPredicted RBP12.65□□□□□ -0.38
CCNC-204ENST00000482541 ADGRL1O94910 1474 aa12.64□□□□□ -0.39
CCNC-204ENST00000482541 HECW1Q76N89 1606 aa12.63□□□□□ -0.39
CCNC-204ENST00000482541 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCNC-204ENST00000482541 CDK13Q14004 1512 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms