RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 BIVM-ERCC5R4GMW8 1640 aa21.91■■□□□ 1.1
CNKSR1-207ENST00000482227 FANCIQ9NVI1 1328 aa21.91■■□□□ 1.1
CNKSR1-207ENST00000482227 SETD5Q9C0A6 1442 aa21.89■■□□□ 1.09
CNKSR1-207ENST00000482227 ARHGAP35Q9NRY4 1499 aa21.88■■□□□ 1.09
CNKSR1-207ENST00000482227 HIRIP3Q9BW71 556 aaPredicted RBP21.87■■□□□ 1.09
CNKSR1-207ENST00000482227 ANP32CO43423 234 aa21.86■■□□□ 1.09
CNKSR1-207ENST00000482227 NCAPD3P42695 1498 aa21.82■■□□□ 1.08
CNKSR1-207ENST00000482227 TIMELESSQ9UNS1 1208 aa21.81■■□□□ 1.08
CNKSR1-207ENST00000482227 HMGXB3Q12766 1538 aa21.81■■□□□ 1.08
CNKSR1-207ENST00000482227 CDK11AQ9UQ88 783 aaPredicted RBP21.75■■□□□ 1.07
CNKSR1-207ENST00000482227 PHLDB1Q86UU1 1377 aa21.73■■□□□ 1.07
CNKSR1-207ENST00000482227 KIF27Q86VH2 1401 aa21.72■■□□□ 1.07
CNKSR1-207ENST00000482227 TIAM1Q13009 1591 aa21.72■■□□□ 1.07
CNKSR1-207ENST00000482227 IRX6P78412 446 aaPredicted RBP21.71■■□□□ 1.07
CNKSR1-207ENST00000482227 MAP3K1Q13233 1512 aa21.71■■□□□ 1.07
CNKSR1-207ENST00000482227 ERICH6Q7L0X2 663 aa21.7■■□□□ 1.06
CNKSR1-207ENST00000482227 LRRC9Q6ZRR7 1453 aa21.68■■□□□ 1.06
CNKSR1-207ENST00000482227 CUX1P39880 1505 aa21.66■■□□□ 1.06
CNKSR1-207ENST00000482227 FAM50AQ14320 339 aaKnown RBP21.66■■□□□ 1.06
CNKSR1-207ENST00000482227 HNRNPUQ00839 825 aaKnown RBP eCLIP21.65■■□□□ 1.06
CNKSR1-207ENST00000482227 MYT1LQ9UL68 1186 aa21.61■■□□□ 1.05
CNKSR1-207ENST00000482227 DEKP35659 375 aaKnown RBP21.59■■□□□ 1.05
CNKSR1-207ENST00000482227 ERICH6BQ5W0A0 696 aa21.58■■□□□ 1.05
CNKSR1-207ENST00000482227 CC2D2AQ9P2K1 1620 aa21.57■■□□□ 1.04
CNKSR1-207ENST00000482227 PPP4R2Q9NY27 417 aa21.56■■□□□ 1.04
CNKSR1-207ENST00000482227 TONSLQ96HA7 1378 aa21.54■■□□□ 1.04
CNKSR1-207ENST00000482227 CFTRP13569 1480 aa21.52■■□□□ 1.04
CNKSR1-207ENST00000482227 IGF1RP08069 1367 aa21.5■■□□□ 1.03
CNKSR1-207ENST00000482227 PRKCSHP14314 528 aaPredicted RBP21.48■■□□□ 1.03
CNKSR1-207ENST00000482227 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.46■■□□□ 1.03
CNKSR1-207ENST00000482227 FHAD1B1AJZ9 1412 aa21.45■■□□□ 1.02
CNKSR1-207ENST00000482227 B4GALNT3Q6L9W6 998 aa21.45■■□□□ 1.02
CNKSR1-207ENST00000482227 CFAP43Q8NDM7 1665 aa21.44■■□□□ 1.02
CNKSR1-207ENST00000482227 DNAJC5BQ9UF47 199 aa21.44■■□□□ 1.02
CNKSR1-207ENST00000482227 WASHC2AQ641Q2 1341 aa21.43■■□□□ 1.02
CNKSR1-207ENST00000482227 CCDC184Q52MB2 194 aa21.43■■□□□ 1.02
CNKSR1-207ENST00000482227 KDM5BQ9UGL1 1544 aa21.43■■□□□ 1.02
CNKSR1-207ENST00000482227 PRDM2Q13029 1718 aa21.41■■□□□ 1.02
CNKSR1-207ENST00000482227 NOP58Q9Y2X3 529 aaKnown RBP21.41■■□□□ 1.02
CNKSR1-207ENST00000482227 PCF11O94913 1555 aaKnown RBP21.4■■□□□ 1.02
CNKSR1-207ENST00000482227 PAK3O75914 559 aaPredicted RBP21.4■■□□□ 1.02
CNKSR1-207ENST00000482227 UACAQ9BZF9 1416 aa21.39■■□□□ 1.01
CNKSR1-207ENST00000482227 CCDC18Q5T9S5 1454 aa21.39■■□□□ 1.01
CNKSR1-207ENST00000482227 CARMIL1Q5VZK9 1371 aa21.38■■□□□ 1.01
CNKSR1-207ENST00000482227 P3H3Q8IVL6 736 aa21.36■■□□□ 1.01
CNKSR1-207ENST00000482227 NBR1Q14596 966 aa21.35■■□□□ 1.01
CNKSR1-207ENST00000482227 PTPRKQ15262 1439 aa21.35■■□□□ 1.01
CNKSR1-207ENST00000482227 HSPA5P11021 654 aaKnown RBP21.34■■□□□ 1.01
CNKSR1-207ENST00000482227 ATP1B4Q9UN42 357 aaPredicted RBP21.34■■□□□ 1.01
CNKSR1-207ENST00000482227 HFM1A2PYH4 1435 aa21.34■■□□□ 1.01
CNKSR1-207ENST00000482227 CADPSQ9ULU8 1353 aa21.33■■□□□ 1.01
CNKSR1-207ENST00000482227 FGD6Q6ZV73 1430 aa21.32■■□□□ 1
CNKSR1-207ENST00000482227 NCOA2Q15596 1464 aa21.31■■□□□ 1
CNKSR1-207ENST00000482227 ZBED9Q6R2W3 1325 aa21.31■■□□□ 1
CNKSR1-207ENST00000482227 AQRO60306 1485 aaKnown RBP eCLIP21.3■■□□□ 1
CNKSR1-207ENST00000482227 CNTLNQ9NXG0 1405 aa21.29■■□□□ 1
CNKSR1-207ENST00000482227 PTPN23Q9H3S7 1636 aa21.28■■□□□ 1
CNKSR1-207ENST00000482227 FAM9BQ8IZU0 186 aa21.28■■□□□ 1
CNKSR1-207ENST00000482227 FHOD3Q2V2M9 1422 aa21.28■■□□□ 1
CNKSR1-207ENST00000482227 FYCO1Q9BQS8 1478 aa21.27■■□□□ 1
CNKSR1-207ENST00000482227 PRKRIP1Q9H875 184 aaPredicted RBP21.27■■□□□ 1
CNKSR1-207ENST00000482227 NAIPQ13075 1403 aa21.27■□□□□ 0.99
CNKSR1-207ENST00000482227 CASKIN1Q8WXD9 1431 aa21.25■□□□□ 0.99
CNKSR1-207ENST00000482227 FGD5Q6ZNL6 1462 aa21.24■□□□□ 0.99
CNKSR1-207ENST00000482227 C11orf95C9JLR9 678 aaPredicted RBP21.24■□□□□ 0.99
CNKSR1-207ENST00000482227 ANO8Q9HCE9 1232 aaPredicted RBP21.23■□□□□ 0.99
CNKSR1-207ENST00000482227 MRS2Q9HD23 443 aa21.23■□□□□ 0.99
CNKSR1-207ENST00000482227 EIF4G2P78344 907 aaKnown RBP eCLIP21.22■□□□□ 0.99
CNKSR1-207ENST00000482227 IPO9Q96P70 1041 aaKnown RBP21.2■□□□□ 0.98
CNKSR1-207ENST00000482227 NCOA1Q15788 1441 aa21.18■□□□□ 0.98
CNKSR1-207ENST00000482227 CCDC7Q96M83 1385 aa21.17■□□□□ 0.98
CNKSR1-207ENST00000482227 DENND4BO75064 1496 aaPredicted RBP21.17■□□□□ 0.98
CNKSR1-207ENST00000482227 FMN1Q68DA7 1419 aa21.16■□□□□ 0.98
CNKSR1-207ENST00000482227 AKNAQ7Z591 1439 aa21.14■□□□□ 0.98
CNKSR1-207ENST00000482227 ANP32AP39687 249 aaKnown RBP21.14■□□□□ 0.97
CNKSR1-207ENST00000482227 RNF123Q5XPI4 1314 aa21.13■□□□□ 0.97
CNKSR1-207ENST00000482227 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
CNKSR1-207ENST00000482227 SMG6Q86US8 1419 aaKnown RBP21.13■□□□□ 0.97
CNKSR1-207ENST00000482227 NESP48681 1621 aa21.13■□□□□ 0.97
CNKSR1-207ENST00000482227 EFCAB5A4FU69 1503 aa21.12■□□□□ 0.97
CNKSR1-207ENST00000482227 MTUS2Q5JR59 1369 aa21.11■□□□□ 0.97
CNKSR1-207ENST00000482227 RTL5Q5HYW3 569 aaPredicted RBP21.1■□□□□ 0.97
CNKSR1-207ENST00000482227 ZBTB47Q9UFB7 747 aaPredicted RBP21.1■□□□□ 0.97
CNKSR1-207ENST00000482227 SALL2Q9Y467 1007 aaPredicted RBP21.1■□□□□ 0.97
CNKSR1-207ENST00000482227 SNAPC4Q5SXM2 1469 aa21.09■□□□□ 0.97
CNKSR1-207ENST00000482227 CCDC136Q96JN2 1154 aa21.09■□□□□ 0.97
CNKSR1-207ENST00000482227 L3MBTL2Q969R5 705 aa21.08■□□□□ 0.97
CNKSR1-207ENST00000482227 MYOM3Q5VTT5 1437 aa21.08■□□□□ 0.97
CNKSR1-207ENST00000482227 IL27Q8NEV9 243 aa21.07■□□□□ 0.96
CNKSR1-207ENST00000482227 NUDCQ9Y266 331 aa21.06■□□□□ 0.96
CNKSR1-207ENST00000482227 RRP7BPQ9NSQ0 103 aa21.05■□□□□ 0.96
CNKSR1-207ENST00000482227 KIF7Q2M1P5 1343 aa21.04■□□□□ 0.96
CNKSR1-207ENST00000482227 LAMC3Q9Y6N6 1575 aa21.01■□□□□ 0.95
CNKSR1-207ENST00000482227 NBPF8Q3BBV2 869 aa21.01■□□□□ 0.95
CNKSR1-207ENST00000482227 SPATA31E1Q6ZUB1 1445 aa21■□□□□ 0.95
CNKSR1-207ENST00000482227 HECW1Q76N89 1606 aa20.99■□□□□ 0.95
CNKSR1-207ENST00000482227 CTTNBP2Q8WZ74 1663 aa20.99■□□□□ 0.95
CNKSR1-207ENST00000482227 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
CNKSR1-207ENST00000482227 CHIC2Q9UKJ5 165 aa20.99■□□□□ 0.95
CNKSR1-207ENST00000482227 DNMBPQ6XZF7 1577 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms