RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 NISCHQ9Y2I1 1504 aa29.91■■■□□ 2.38
CNKSR1-207ENST00000482227 HRCP23327 699 aa26.34■■□□□ 1.81
CNKSR1-207ENST00000482227 SHROOM4Q9ULL8 1493 aa26.25■■□□□ 1.79
CNKSR1-207ENST00000482227 SUPT5HO00267 1087 aaKnown RBP26.11■■□□□ 1.77
CNKSR1-207ENST00000482227 MYO15BQ96JP2 1530 aa25.91■■□□□ 1.74
CNKSR1-207ENST00000482227 PCGF6Q9BYE7 350 aa25.8■■□□□ 1.72
CNKSR1-207ENST00000482227 CHIC1Q5VXU3 224 aa25.76■■□□□ 1.71
CNKSR1-207ENST00000482227 PPARGC1BQ86YN6 1023 aaKnown RBP25.76■■□□□ 1.71
CNKSR1-207ENST00000482227 CCDC180Q9P1Z9 1646 aa25.46■■□□□ 1.67
CNKSR1-207ENST00000482227 ZCCHC6Q5VYS8 1495 aaKnown RBP25.45■■□□□ 1.66
CNKSR1-207ENST00000482227 DCAF1Q9Y4B6 1507 aa25.34■■□□□ 1.65
CNKSR1-207ENST00000482227 PELP1Q8IZL8 1130 aaKnown RBP25.14■■□□□ 1.61
CNKSR1-207ENST00000482227 LOC105371045A0A1W2PR82 267 aa25.11■■□□□ 1.61
CNKSR1-207ENST00000482227 TRIM26Q12899 539 aaPredicted RBP25.05■■□□□ 1.6
CNKSR1-207ENST00000482227 SCAF1Q9H7N4 1312 aaKnown RBP24.83■■□□□ 1.57
CNKSR1-207ENST00000482227 DCAF8L2P0C7V8 631 aa24.78■■□□□ 1.56
CNKSR1-207ENST00000482227 ZEB1P37275 1124 aaPredicted RBP24.78■■□□□ 1.56
CNKSR1-207ENST00000482227 ACIN1Q9UKV3 1341 aaKnown RBP24.26■■□□□ 1.47
CNKSR1-207ENST00000482227 NEUROD1Q13562 356 aa24.2■■□□□ 1.46
CNKSR1-207ENST00000482227 TRIM41Q8WV44 630 aa24.19■■□□□ 1.46
CNKSR1-207ENST00000482227 ABCC9O60706 1549 aa24.14■■□□□ 1.45
CNKSR1-207ENST00000482227 FAM9AQ8IZU1 332 aaPredicted RBP24.12■■□□□ 1.45
CNKSR1-207ENST00000482227 MYT1Q01538 1121 aa24.09■■□□□ 1.45
CNKSR1-207ENST00000482227 RSF1Q96T23 1441 aaPredicted RBP24.05■■□□□ 1.44
CNKSR1-207ENST00000482227 GTF3C3Q9Y5Q9 886 aa24.02■■□□□ 1.44
CNKSR1-207ENST00000482227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.96■■□□□ 1.43
CNKSR1-207ENST00000482227 EHMT2Q96KQ7 1210 aa23.94■■□□□ 1.42
CNKSR1-207ENST00000482227 CENPBP07199 599 aaPredicted RBP23.89■■□□□ 1.41
CNKSR1-207ENST00000482227 RB1CC1Q8TDY2 1594 aa23.88■■□□□ 1.41
CNKSR1-207ENST00000482227 DIEXFQ68CQ4 756 aaKnown RBP23.88■■□□□ 1.41
CNKSR1-207ENST00000482227 CCER1Q8TC90 406 aaPredicted RBP23.88■■□□□ 1.41
CNKSR1-207ENST00000482227 SCRIBQ14160 1630 aa23.73■■□□□ 1.39
CNKSR1-207ENST00000482227 NACADO15069 1562 aa23.62■■□□□ 1.37
CNKSR1-207ENST00000482227 ZNF316A6NFI3 1004 aaPredicted RBP23.48■■□□□ 1.35
CNKSR1-207ENST00000482227 WRNQ14191 1432 aaPredicted RBP eCLIP23.43■■□□□ 1.34
CNKSR1-207ENST00000482227 YTHDC1Q96MU7 727 aaKnown RBP23.41■■□□□ 1.34
CNKSR1-207ENST00000482227 CECR2Q9BXF3 1484 aa23.39■■□□□ 1.33
CNKSR1-207ENST00000482227 TTBK1Q5TCY1 1321 aaPredicted RBP23.38■■□□□ 1.33
CNKSR1-207ENST00000482227 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
CNKSR1-207ENST00000482227 MIER1Q8N108 512 aa23.32■■□□□ 1.32
CNKSR1-207ENST00000482227 EIF4G1Q04637 1599 aaKnown RBP23.26■■□□□ 1.31
CNKSR1-207ENST00000482227 CEP162Q5TB80 1403 aa23.26■■□□□ 1.31
CNKSR1-207ENST00000482227 WIZO95785 1651 aa23.23■■□□□ 1.31
CNKSR1-207ENST00000482227 TNIKQ9UKE5 1360 aa23.14■■□□□ 1.29
CNKSR1-207ENST00000482227 CCDC88BA6NC98 1476 aa23.13■■□□□ 1.29
CNKSR1-207ENST00000482227 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
CNKSR1-207ENST00000482227 ABCC8Q09428 1581 aa23.05■■□□□ 1.28
CNKSR1-207ENST00000482227 SOGA1O94964 1423 aa23.04■■□□□ 1.28
CNKSR1-207ENST00000482227 UNC13AQ9UPW8 1703 aa23.02■■□□□ 1.28
CNKSR1-207ENST00000482227 HNRNPUL2Q1KMD3 747 aaKnown RBP22.95■■□□□ 1.26
CNKSR1-207ENST00000482227 CSRNP3Q8WYN3 585 aa22.93■■□□□ 1.26
CNKSR1-207ENST00000482227 SUPT16HQ9Y5B9 1047 aaKnown RBP22.93■■□□□ 1.26
CNKSR1-207ENST00000482227 UBTFP17480 764 aaKnown RBP22.92■■□□□ 1.26
CNKSR1-207ENST00000482227 RUSC2Q8N2Y8 1516 aa22.9■■□□□ 1.26
CNKSR1-207ENST00000482227 EEA1Q15075 1411 aa22.89■■□□□ 1.25
CNKSR1-207ENST00000482227 CLSPNQ9HAW4 1339 aa22.89■■□□□ 1.25
CNKSR1-207ENST00000482227 TOP2AP11388 1531 aaKnown RBP22.83■■□□□ 1.25
CNKSR1-207ENST00000482227 GOLGA3Q08378 1498 aa22.82■■□□□ 1.24
CNKSR1-207ENST00000482227 TSHZ2Q9NRE2 1034 aa22.81■■□□□ 1.24
CNKSR1-207ENST00000482227 ANP32EQ9BTT0 268 aa22.76■■□□□ 1.23
CNKSR1-207ENST00000482227 SMARCA2P51531 1590 aa22.76■■□□□ 1.23
CNKSR1-207ENST00000482227 SMARCA4P51532 1647 aa22.71■■□□□ 1.23
CNKSR1-207ENST00000482227 BICRAQ9NZM4 1560 aa22.71■■□□□ 1.23
CNKSR1-207ENST00000482227 PABPN1Q86U42 306 aaKnown RBP eCLIP22.67■■□□□ 1.22
CNKSR1-207ENST00000482227 CLIP1P30622 1438 aa22.65■■□□□ 1.22
CNKSR1-207ENST00000482227 VPS8Q8N3P4 1428 aa22.64■■□□□ 1.21
CNKSR1-207ENST00000482227 BCL11AQ9H165 835 aa22.6■■□□□ 1.21
CNKSR1-207ENST00000482227 DHX57Q6P158 1386 aaKnown RBP22.6■■□□□ 1.21
CNKSR1-207ENST00000482227 CEP164Q9UPV0 1460 aa22.6■■□□□ 1.21
CNKSR1-207ENST00000482227 KIF21BO75037 1637 aa22.54■■□□□ 1.2
CNKSR1-207ENST00000482227 APLP2Q06481 763 aa22.52■■□□□ 1.19
CNKSR1-207ENST00000482227 KCNH8Q96L42 1107 aa22.45■■□□□ 1.18
CNKSR1-207ENST00000482227 BAZ1BQ9UIG0 1483 aaKnown RBP22.43■■□□□ 1.18
CNKSR1-207ENST00000482227 RAPGEF2Q9Y4G8 1499 aa22.41■■□□□ 1.18
CNKSR1-207ENST00000482227 SYNJ1O43426 1573 aa22.39■■□□□ 1.18
CNKSR1-207ENST00000482227 BCANQ96GW7 911 aa22.37■■□□□ 1.17
CNKSR1-207ENST00000482227 RANGAP1P46060 587 aaPredicted RBP22.34■■□□□ 1.17
CNKSR1-207ENST00000482227 FKBP8Q14318 412 aa22.3■■□□□ 1.16
CNKSR1-207ENST00000482227 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
CNKSR1-207ENST00000482227 KANK4Q5T7N3 995 aaPredicted RBP22.28■■□□□ 1.16
CNKSR1-207ENST00000482227 RBM19Q9Y4C8 960 aaKnown RBP22.26■■□□□ 1.15
CNKSR1-207ENST00000482227 CUX2O14529 1486 aa22.26■■□□□ 1.15
CNKSR1-207ENST00000482227 RRBP1Q9P2E9 1410 aaKnown RBP22.24■■□□□ 1.15
CNKSR1-207ENST00000482227 ARAP1Q96P48 1450 aa22.2■■□□□ 1.15
CNKSR1-207ENST00000482227 ATAD2BQ9ULI0 1458 aa22.14■■□□□ 1.14
CNKSR1-207ENST00000482227 CCNB3Q8WWL7 1395 aa22.11■■□□□ 1.13
CNKSR1-207ENST00000482227 MAPKBP1O60336 1514 aa22.1■■□□□ 1.13
CNKSR1-207ENST00000482227 DDX10Q13206 875 aaKnown RBP22.1■■□□□ 1.13
CNKSR1-207ENST00000482227 MSH5O43196 834 aa22.09■■□□□ 1.13
CNKSR1-207ENST00000482227 ITGAEP38570 1179 aa22.07■■□□□ 1.12
CNKSR1-207ENST00000482227 PRXQ9BXM0 1461 aa22.06■■□□□ 1.12
CNKSR1-207ENST00000482227 NEFLP07196 543 aa22.06■■□□□ 1.12
CNKSR1-207ENST00000482227 PPP1R15AO75807 674 aaPredicted RBP22.06■■□□□ 1.12
CNKSR1-207ENST00000482227 RAB3GAP2Q9H2M9 1393 aa22.05■■□□□ 1.12
CNKSR1-207ENST00000482227 ERICH3Q5RHP9 1530 aa22.05■■□□□ 1.12
CNKSR1-207ENST00000482227 TRIM52Q96A61 297 aa22■■□□□ 1.11
CNKSR1-207ENST00000482227 WDR97A6NE52 1622 aa21.99■■□□□ 1.11
CNKSR1-207ENST00000482227 TOP2BQ02880 1626 aa21.98■■□□□ 1.11
CNKSR1-207ENST00000482227 CCER2I3L3R5 266 aa21.97■■□□□ 1.11
CNKSR1-207ENST00000482227 SIN3AQ96ST3 1273 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms