RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 RAD54L2Q9Y4B4 1467 aa27.35■■□□□ 1.97
CCM2-214ENST00000481194 RUSC2Q8N2Y8 1516 aa27.35■■□□□ 1.97
CCM2-214ENST00000481194 TOPBP1Q92547 1522 aa27.33■■□□□ 1.97
CCM2-214ENST00000481194 IGF1RP08069 1367 aa27.33■■□□□ 1.97
CCM2-214ENST00000481194 IFT140Q96RY7 1462 aa27.32■■□□□ 1.96
CCM2-214ENST00000481194 POLR3GLQ9BT43 218 aa27.32■■□□□ 1.96
CCM2-214ENST00000481194 CUX1P39880 1505 aa27.29■■□□□ 1.96
CCM2-214ENST00000481194 KIF21BO75037 1637 aa27.27■■□□□ 1.96
CCM2-214ENST00000481194 CFDP1Q9UEE9 299 aaPredicted RBP27.27■■□□□ 1.96
CCM2-214ENST00000481194 ERICH3Q5RHP9 1530 aa27.26■■□□□ 1.95
CCM2-214ENST00000481194 GRIN2BQ13224 1484 aa27.25■■□□□ 1.95
CCM2-214ENST00000481194 CCNB3Q8WWL7 1395 aa27.25■■□□□ 1.95
CCM2-214ENST00000481194 CHIC2Q9UKJ5 165 aa27.24■■□□□ 1.95
CCM2-214ENST00000481194 KCNH8Q96L42 1107 aa27.23■■□□□ 1.95
CCM2-214ENST00000481194 ESF1Q9H501 851 aaKnown RBP27.21■■□□□ 1.95
CCM2-214ENST00000481194 TONSLQ96HA7 1378 aa27.2■■□□□ 1.94
CCM2-214ENST00000481194 ARHGAP35Q9NRY4 1499 aa27.2■■□□□ 1.94
CCM2-214ENST00000481194 POLA1P09884 1462 aaPredicted RBP27.18■■□□□ 1.94
CCM2-214ENST00000481194 ZNF326Q5BKZ1 582 aaKnown RBP27.13■■□□□ 1.93
CCM2-214ENST00000481194 FHOD3Q2V2M9 1422 aa27.13■■□□□ 1.93
CCM2-214ENST00000481194 DIEXFQ68CQ4 756 aaKnown RBP27.13■■□□□ 1.93
CCM2-214ENST00000481194 JPH4Q96JJ6 628 aa27.11■■□□□ 1.93
CCM2-214ENST00000481194 NEFLP07196 543 aa27.09■■□□□ 1.93
CCM2-214ENST00000481194 AQRO60306 1485 aaKnown RBP eCLIP27.09■■□□□ 1.937e-7■■■■■ 33.7
CCM2-214ENST00000481194 ZNF316A6NFI3 1004 aaPredicted RBP27.09■■□□□ 1.93
CCM2-214ENST00000481194 YTHDC1Q96MU7 727 aaKnown RBP27.07■■□□□ 1.92
CCM2-214ENST00000481194 ABCA10Q8WWZ4 1543 aa27.05■■□□□ 1.92
CCM2-214ENST00000481194 RRP7BPQ9NSQ0 103 aa27.02■■□□□ 1.92
CCM2-214ENST00000481194 CCDC18Q5T9S5 1454 aa27.01■■□□□ 1.92
CCM2-214ENST00000481194 BIVM-ERCC5R4GMW8 1640 aa27.01■■□□□ 1.91
CCM2-214ENST00000481194 PRXQ9BXM0 1461 aa26.99■■□□□ 1.91
CCM2-214ENST00000481194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.98■■□□□ 1.91
CCM2-214ENST00000481194 DNAJC5BQ9UF47 199 aa26.97■■□□□ 1.91
CCM2-214ENST00000481194 SLC4A1APQ9BWU0 796 aaKnown RBP26.94■■□□□ 1.9
CCM2-214ENST00000481194 CLSPNQ9HAW4 1339 aa26.93■■□□□ 1.9
CCM2-214ENST00000481194 EFCAB5A4FU69 1503 aa26.93■■□□□ 1.9
CCM2-214ENST00000481194 PTPRGP23470 1445 aa26.92■■□□□ 1.9
CCM2-214ENST00000481194 CUL7Q14999 1698 aa26.91■■□□□ 1.9
CCM2-214ENST00000481194 KANK4Q5T7N3 995 aaPredicted RBP26.91■■□□□ 1.9
CCM2-214ENST00000481194 ANP32CO43423 234 aa26.89■■□□□ 1.9
CCM2-214ENST00000481194 OSCARQ8IYS5 282 aa26.89■■□□□ 1.9
CCM2-214ENST00000481194 STAG3Q9UJ98 1225 aa26.88■■□□□ 1.89
CCM2-214ENST00000481194 URB2Q14146 1524 aaKnown RBP26.84■■□□□ 1.89
CCM2-214ENST00000481194 SNAPC4Q5SXM2 1469 aa26.83■■□□□ 1.89
CCM2-214ENST00000481194 BCANQ96GW7 911 aa26.82■■□□□ 1.88
CCM2-214ENST00000481194 CHGAP10645 457 aaKnown RBP26.81■■□□□ 1.88
CCM2-214ENST00000481194 SETD5Q9C0A6 1442 aa26.8■■□□□ 1.88
CCM2-214ENST00000481194 EFCAB2Q5VUJ9 269 aa26.8■■□□□ 1.88
CCM2-214ENST00000481194 RSPH4AQ5TD94 716 aa26.78■■□□□ 1.88
CCM2-214ENST00000481194 CASKIN1Q8WXD9 1431 aa26.77■■□□□ 1.88
CCM2-214ENST00000481194 MAGI1Q96QZ7 1491 aaPredicted RBP26.73■■□□□ 1.87
CCM2-214ENST00000481194 FYCO1Q9BQS8 1478 aa26.73■■□□□ 1.87
CCM2-214ENST00000481194 KANK1Q14678 1352 aa26.72■■□□□ 1.87
CCM2-214ENST00000481194 ANKRD30AQ9BXX3 1397 aa26.7■■□□□ 1.86
CCM2-214ENST00000481194 CNGB1Q14028 1251 aaPredicted RBP26.7■■□□□ 1.86
CCM2-214ENST00000481194 PRDM2Q13029 1718 aa26.68■■□□□ 1.86
CCM2-214ENST00000481194 SYNJ2O15056 1496 aa26.66■■□□□ 1.86
CCM2-214ENST00000481194 KIAA0586Q9BVV6 1533 aa26.66■■□□□ 1.86
CCM2-214ENST00000481194 TIMELESSQ9UNS1 1208 aa26.64■■□□□ 1.86
CCM2-214ENST00000481194 PRG4Q92954 1404 aaPredicted RBP26.59■■□□□ 1.85
CCM2-214ENST00000481194 IQGAP2Q13576 1575 aa26.58■■□□□ 1.85
CCM2-214ENST00000481194 ARAP1Q96P48 1450 aa26.58■■□□□ 1.85
CCM2-214ENST00000481194 LRRC9Q6ZRR7 1453 aa26.56■■□□□ 1.84
CCM2-214ENST00000481194 HECW1Q76N89 1606 aa26.55■■□□□ 1.84
CCM2-214ENST00000481194 EIF4G2P78344 907 aaKnown RBP eCLIP26.53■■□□□ 1.84
CCM2-214ENST00000481194 KDM2AQ9Y2K7 1162 aa26.53■■□□□ 1.84
CCM2-214ENST00000481194 GRIN2AQ12879 1464 aa26.53■■□□□ 1.84
CCM2-214ENST00000481194 ARID4BQ4LE39 1312 aaPredicted RBP26.53■■□□□ 1.84
CCM2-214ENST00000481194 RAB3GAP2Q9H2M9 1393 aa26.5■■□□□ 1.83
CCM2-214ENST00000481194 MYOM3Q5VTT5 1437 aa26.49■■□□□ 1.83
CCM2-214ENST00000481194 EHBP1L1Q8N3D4 1523 aa26.47■■□□□ 1.83
CCM2-214ENST00000481194 KIF21AQ7Z4S6 1674 aa26.43■■□□□ 1.82
CCM2-214ENST00000481194 SPAG9O60271 1321 aaKnown RBP26.43■■□□□ 1.82
CCM2-214ENST00000481194 FGD6Q6ZV73 1430 aa26.43■■□□□ 1.82
CCM2-214ENST00000481194 TRHP20396 242 aaPredicted RBP26.42■■□□□ 1.82
CCM2-214ENST00000481194 PPP1R15AO75807 674 aaPredicted RBP26.41■■□□□ 1.82
CCM2-214ENST00000481194 WDR62O43379 1518 aa26.4■■□□□ 1.82
CCM2-214ENST00000481194 NCOA2Q15596 1464 aa26.39■■□□□ 1.82
CCM2-214ENST00000481194 HNRNPMP52272 730 aaKnown RBP eCLIP26.39■■□□□ 1.82
CCM2-214ENST00000481194 ZNF608Q9ULD9 1512 aaPredicted RBP26.38■■□□□ 1.81
CCM2-214ENST00000481194 PLPPR3Q6T4P5 718 aa26.38■■□□□ 1.81
CCM2-214ENST00000481194 TIAM1Q13009 1591 aa26.36■■□□□ 1.81
CCM2-214ENST00000481194 NEFMP07197 916 aa26.36■■□□□ 1.81
CCM2-214ENST00000481194 NUP155O75694 1391 aa26.35■■□□□ 1.81
CCM2-214ENST00000481194 CDCA8Q53HL2 280 aa26.35■■□□□ 1.81
CCM2-214ENST00000481194 WDR97A6NE52 1622 aa26.34■■□□□ 1.81
CCM2-214ENST00000481194 RGL3Q3MIN7 710 aa26.34■■□□□ 1.81
CCM2-214ENST00000481194 ERICH6Q7L0X2 663 aa26.34■■□□□ 1.81
CCM2-214ENST00000481194 MPHOSPH9Q99550 1183 aa26.33■■□□□ 1.8
CCM2-214ENST00000481194 DDX10Q13206 875 aaKnown RBP26.32■■□□□ 1.8
CCM2-214ENST00000481194 CYB5RLQ6IPT4 315 aa26.32■■□□□ 1.8
CCM2-214ENST00000481194 PKD2Q13563 968 aa26.31■■□□□ 1.8
CCM2-214ENST00000481194 SIN3AQ96ST3 1273 aa26.31■■□□□ 1.8
CCM2-214ENST00000481194 SLC24A1O60721 1099 aa26.3■■□□□ 1.8
CCM2-214ENST00000481194 MAP3K1Q13233 1512 aa26.3■■□□□ 1.8
CCM2-214ENST00000481194 TROQ12816 1431 aaPredicted RBP26.28■■□□□ 1.8
CCM2-214ENST00000481194 HDGFP51858 240 aaKnown RBP26.27■■□□□ 1.8
CCM2-214ENST00000481194 PHLDB1Q86UU1 1377 aa26.27■■□□□ 1.8
CCM2-214ENST00000481194 MIA2Q96PC5 1412 aa26.26■■□□□ 1.8
CCM2-214ENST00000481194 CARD11Q9BXL7 1154 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms