RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 RUSC2Q8N2Y8 1516 aa26.18■■□□□ 1.78
CDK9-203ENST00000480353 PRG4Q92954 1404 aaPredicted RBP26.16■■□□□ 1.78
CDK9-203ENST00000480353 CARMIL1Q5VZK9 1371 aa26.15■■□□□ 1.78
CDK9-203ENST00000480353 KIAA0586Q9BVV6 1533 aa26.09■■□□□ 1.77
CDK9-203ENST00000480353 RAPGEF2Q9Y4G8 1499 aa25.97■■□□□ 1.75
CDK9-203ENST00000480353 IQGAP2Q13576 1575 aa25.94■■□□□ 1.74
CDK9-203ENST00000480353 NPM1P06748 294 aaKnown RBP eCLIP25.93■■□□□ 1.74
CDK9-203ENST00000480353 CARMIL2Q6F5E8 1435 aa25.91■■□□□ 1.74
CDK9-203ENST00000480353 TTBK1Q5TCY1 1321 aaPredicted RBP25.88■■□□□ 1.73
CDK9-203ENST00000480353 PTPRGP23470 1445 aa25.82■■□□□ 1.72
CDK9-203ENST00000480353 CTTNBP2Q8WZ74 1663 aa25.8■■□□□ 1.72
CDK9-203ENST00000480353 TNIKQ9UKE5 1360 aa25.8■■□□□ 1.72
CDK9-203ENST00000480353 ADCY10Q96PN6 1610 aa25.79■■□□□ 1.72
CDK9-203ENST00000480353 UGGT2Q9NYU1 1516 aa25.72■■□□□ 1.71
CDK9-203ENST00000480353 KIF13AQ9H1H9 1805 aa25.71■■□□□ 1.71
CDK9-203ENST00000480353 PRXQ9BXM0 1461 aa25.7■■□□□ 1.7
CDK9-203ENST00000480353 MAPKBP1O60336 1514 aa25.69■■□□□ 1.7
CDK9-203ENST00000480353 DISP1Q96F81 1524 aa25.69■■□□□ 1.7
CDK9-203ENST00000480353 CSRNP3Q8WYN3 585 aa25.68■■□□□ 1.7
CDK9-203ENST00000480353 KIAA0556O60303 1618 aa25.67■■□□□ 1.7
CDK9-203ENST00000480353 FAM69CQ0P6D2 419 aa25.66■■□□□ 1.7
CDK9-203ENST00000480353 EEA1Q15075 1411 aa25.65■■□□□ 1.7
CDK9-203ENST00000480353 GOLGA3Q08378 1498 aa25.64■■□□□ 1.69
CDK9-203ENST00000480353 ABCC10Q5T3U5 1492 aa25.62■■□□□ 1.69
CDK9-203ENST00000480353 UACAQ9BZF9 1416 aa25.62■■□□□ 1.69
CDK9-203ENST00000480353 ABCC2Q92887 1545 aa25.6■■□□□ 1.69
CDK9-203ENST00000480353 FAM9AQ8IZU1 332 aaPredicted RBP25.6■■□□□ 1.69
CDK9-203ENST00000480353 DIP2BQ9P265 1576 aa25.58■■□□□ 1.69
CDK9-203ENST00000480353 UHRF1BP1LA0JNW5 1464 aa25.57■■□□□ 1.68
CDK9-203ENST00000480353 TSPOAP1O95153 1857 aa25.52■■□□□ 1.68
CDK9-203ENST00000480353 PLB1Q6P1J6 1458 aa25.5■■□□□ 1.67
CDK9-203ENST00000480353 ASXL2Q76L83 1435 aa25.49■■□□□ 1.67
CDK9-203ENST00000480353 CHIC1Q5VXU3 224 aa25.47■■□□□ 1.67
CDK9-203ENST00000480353 ZCCHC11Q5TAX3 1644 aaKnown RBP25.47■■□□□ 1.67
CDK9-203ENST00000480353 P3H3Q8IVL6 736 aa25.45■■□□□ 1.66
CDK9-203ENST00000480353 KDM5BQ9UGL1 1544 aa25.44■■□□□ 1.66
CDK9-203ENST00000480353 RANGAP1P46060 587 aaPredicted RBP25.43■■□□□ 1.66
CDK9-203ENST00000480353 KIF21BO75037 1637 aa25.4■■□□□ 1.66
CDK9-203ENST00000480353 ABCA8O94911 1581 aa25.37■■□□□ 1.65
CDK9-203ENST00000480353 GLI2P10070 1586 aa25.35■■□□□ 1.65
CDK9-203ENST00000480353 EHMT2Q96KQ7 1210 aa25.35■■□□□ 1.65
CDK9-203ENST00000480353 SAMD9Q5K651 1589 aa25.35■■□□□ 1.65
CDK9-203ENST00000480353 KDM6BO15054 1643 aa25.34■■□□□ 1.65
CDK9-203ENST00000480353 EPRSP07814 1512 aaKnown RBP25.32■■□□□ 1.64
CDK9-203ENST00000480353 UBTFP17480 764 aaKnown RBP25.31■■□□□ 1.64
CDK9-203ENST00000480353 WDR7Q9Y4E6 1490 aa25.31■■□□□ 1.64
CDK9-203ENST00000480353 AEBP2Q6ZN18 517 aaPredicted RBP25.29■■□□□ 1.64
CDK9-203ENST00000480353 ARID3CA6NKF2 412 aa25.28■■□□□ 1.64
CDK9-203ENST00000480353 KCNH8Q96L42 1107 aa25.26■■□□□ 1.63
CDK9-203ENST00000480353 RAPGEF6Q8TEU7 1601 aa25.25■■□□□ 1.63
CDK9-203ENST00000480353 MAP3K4Q9Y6R4 1608 aa25.25■■□□□ 1.63
CDK9-203ENST00000480353 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.24■■□□□ 1.63
CDK9-203ENST00000480353 HNRNPUL2Q1KMD3 747 aaKnown RBP25.24■■□□□ 1.63
CDK9-203ENST00000480353 TEX14Q8IWB6 1497 aa25.23■■□□□ 1.63
CDK9-203ENST00000480353 PPRC1Q5VV67 1664 aaKnown RBP25.23■■□□□ 1.63
CDK9-203ENST00000480353 FHOD3Q2V2M9 1422 aa25.22■■□□□ 1.63
CDK9-203ENST00000480353 EFCAB5A4FU69 1503 aa25.22■■□□□ 1.63
CDK9-203ENST00000480353 CFAP43Q8NDM7 1665 aa25.17■■□□□ 1.62
CDK9-203ENST00000480353 ATP10BO94823 1461 aa25.16■■□□□ 1.62
CDK9-203ENST00000480353 CD109Q6YHK3 1445 aa25.13■■□□□ 1.61
CDK9-203ENST00000480353 NUP153P49790 1475 aaKnown RBP25.07■■□□□ 1.6
CDK9-203ENST00000480353 MAGI3Q5TCQ9 1506 aa25.06■■□□□ 1.6
CDK9-203ENST00000480353 ATP1B4Q9UN42 357 aaPredicted RBP25.05■■□□□ 1.6
CDK9-203ENST00000480353 PLEKHD1A6NEE1 506 aa25.03■■□□□ 1.6
CDK9-203ENST00000480353 FMN1Q68DA7 1419 aa25.02■■□□□ 1.6
CDK9-203ENST00000480353 ABCA9Q8IUA7 1624 aa25■■□□□ 1.59
CDK9-203ENST00000480353 ARHGAP35Q9NRY4 1499 aa24.97■■□□□ 1.59
CDK9-203ENST00000480353 COL17A1Q9UMD9 1497 aaPredicted RBP24.96■■□□□ 1.59
CDK9-203ENST00000480353 HECW1Q76N89 1606 aa24.96■■□□□ 1.59
CDK9-203ENST00000480353 CDK13Q14004 1512 aaKnown RBP24.91■■□□□ 1.58
CDK9-203ENST00000480353 CDK11AQ9UQ88 783 aaPredicted RBP24.88■■□□□ 1.57
CDK9-203ENST00000480353 PHLDB1Q86UU1 1377 aa24.88■■□□□ 1.57
CDK9-203ENST00000480353 NEO1Q92859 1461 aa24.84■■□□□ 1.57
CDK9-203ENST00000480353 ARAP3Q8WWN8 1544 aa24.84■■□□□ 1.57
CDK9-203ENST00000480353 KDM4FA0A1W2PPD8 638 aa24.82■■□□□ 1.56
CDK9-203ENST00000480353 CFAP74Q9C0B2 1584 aa24.81■■□□□ 1.56
CDK9-203ENST00000480353 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.81■■□□□ 1.567e-9■■■□□ 17.9
CDK9-203ENST00000480353 CLIP1P30622 1438 aa24.78■■□□□ 1.56
CDK9-203ENST00000480353 ADGRL1O94910 1474 aa24.78■■□□□ 1.56
CDK9-203ENST00000480353 TTC37Q6PGP7 1564 aa24.78■■□□□ 1.56
CDK9-203ENST00000480353 FANCAO15360 1455 aa24.76■■□□□ 1.55
CDK9-203ENST00000480353 PCF11O94913 1555 aaKnown RBP24.75■■□□□ 1.55
CDK9-203ENST00000480353 RAPGEF3O95398 923 aa24.74■■□□□ 1.55
CDK9-203ENST00000480353 KIF14Q15058 1648 aa24.73■■□□□ 1.55
CDK9-203ENST00000480353 LRRIQ1Q96JM4 1722 aa24.72■■□□□ 1.55
CDK9-203ENST00000480353 CCDC18Q5T9S5 1454 aa24.72■■□□□ 1.55
CDK9-203ENST00000480353 CASKIN1Q8WXD9 1431 aa24.72■■□□□ 1.55
CDK9-203ENST00000480353 MYO5CQ9NQX4 1742 aa24.72■■□□□ 1.55
CDK9-203ENST00000480353 AKNAQ7Z591 1439 aa24.71■■□□□ 1.55
CDK9-203ENST00000480353 TROQ12816 1431 aaPredicted RBP24.69■■□□□ 1.54
CDK9-203ENST00000480353 DENND4BO75064 1496 aaPredicted RBP24.69■■□□□ 1.54
CDK9-203ENST00000480353 FYCO1Q9BQS8 1478 aa24.67■■□□□ 1.54
CDK9-203ENST00000480353 PLCH2O75038 1416 aa24.66■■□□□ 1.54
CDK9-203ENST00000480353 RICTORQ6R327 1708 aa24.64■■□□□ 1.53
CDK9-203ENST00000480353 FRMPD1Q5SYB0 1578 aa24.63■■□□□ 1.53
CDK9-203ENST00000480353 EFCAB2Q5VUJ9 269 aa24.63■■□□□ 1.53
CDK9-203ENST00000480353 ARID4BQ4LE39 1312 aaPredicted RBP24.61■■□□□ 1.53
CDK9-203ENST00000480353 ARHGAP5Q13017 1502 aa24.61■■□□□ 1.53
CDK9-203ENST00000480353 SCAPERQ9BY12 1400 aa24.58■■□□□ 1.53
CDK9-203ENST00000480353 CEP162Q5TB80 1403 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms