RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 JPH4Q96JJ6 628 aa25.05■■□□□ 1.6
SMARCE1-209ENST00000478349 CUL7Q14999 1698 aa25.04■■□□□ 1.6
SMARCE1-209ENST00000478349 RUSC2Q8N2Y8 1516 aa25.03■■□□□ 1.6
SMARCE1-209ENST00000478349 IGF1RP08069 1367 aa25.01■■□□□ 1.59
SMARCE1-209ENST00000478349 KIAA0586Q9BVV6 1533 aa24.96■■□□□ 1.59
SMARCE1-209ENST00000478349 CARMIL1Q5VZK9 1371 aa24.9■■□□□ 1.58
SMARCE1-209ENST00000478349 NPM1P06748 294 aaKnown RBP eCLIP24.88■■□□□ 1.57
SMARCE1-209ENST00000478349 CARMIL2Q6F5E8 1435 aa24.79■■□□□ 1.56
SMARCE1-209ENST00000478349 MAPKBP1O60336 1514 aa24.75■■□□□ 1.55
SMARCE1-209ENST00000478349 IQGAP2Q13576 1575 aa24.73■■□□□ 1.55
SMARCE1-209ENST00000478349 PTPRGP23470 1445 aa24.72■■□□□ 1.55
SMARCE1-209ENST00000478349 RAPGEF2Q9Y4G8 1499 aa24.7■■□□□ 1.55
SMARCE1-209ENST00000478349 TNIKQ9UKE5 1360 aa24.7■■□□□ 1.55
SMARCE1-209ENST00000478349 ADCY10Q96PN6 1610 aa24.7■■□□□ 1.54
SMARCE1-209ENST00000478349 ABCC10Q5T3U5 1492 aa24.7■■□□□ 1.54
SMARCE1-209ENST00000478349 FAM69CQ0P6D2 419 aa24.66■■□□□ 1.54
SMARCE1-209ENST00000478349 KIF13AQ9H1H9 1805 aa24.61■■□□□ 1.53
SMARCE1-209ENST00000478349 DIP2BQ9P265 1576 aa24.59■■□□□ 1.53
SMARCE1-209ENST00000478349 TTBK1Q5TCY1 1321 aaPredicted RBP24.59■■□□□ 1.53
SMARCE1-209ENST00000478349 ABCC2Q92887 1545 aa24.58■■□□□ 1.53
SMARCE1-209ENST00000478349 UGGT2Q9NYU1 1516 aa24.56■■□□□ 1.52
SMARCE1-209ENST00000478349 UHRF1BP1LA0JNW5 1464 aa24.55■■□□□ 1.52
SMARCE1-209ENST00000478349 DISP1Q96F81 1524 aa24.54■■□□□ 1.52
SMARCE1-209ENST00000478349 UACAQ9BZF9 1416 aa24.53■■□□□ 1.52
SMARCE1-209ENST00000478349 PLB1Q6P1J6 1458 aa24.51■■□□□ 1.51
SMARCE1-209ENST00000478349 KIAA0556O60303 1618 aa24.48■■□□□ 1.51
SMARCE1-209ENST00000478349 GOLGA3Q08378 1498 aa24.48■■□□□ 1.51
SMARCE1-209ENST00000478349 ASXL2Q76L83 1435 aa24.45■■□□□ 1.51
SMARCE1-209ENST00000478349 PRXQ9BXM0 1461 aa24.44■■□□□ 1.5
SMARCE1-209ENST00000478349 CTTNBP2Q8WZ74 1663 aa24.41■■□□□ 1.5
SMARCE1-209ENST00000478349 FAM9AQ8IZU1 332 aaPredicted RBP24.41■■□□□ 1.5
SMARCE1-209ENST00000478349 KDM5BQ9UGL1 1544 aa24.4■■□□□ 1.5
SMARCE1-209ENST00000478349 KDM6BO15054 1643 aa24.39■■□□□ 1.5
SMARCE1-209ENST00000478349 GLI2P10070 1586 aa24.37■■□□□ 1.49
SMARCE1-209ENST00000478349 EEA1Q15075 1411 aa24.33■■□□□ 1.49
SMARCE1-209ENST00000478349 EPRSP07814 1512 aaKnown RBP24.3■■□□□ 1.48
SMARCE1-209ENST00000478349 ZCCHC11Q5TAX3 1644 aaKnown RBP24.29■■□□□ 1.48
SMARCE1-209ENST00000478349 CSRNP3Q8WYN3 585 aa24.29■■□□□ 1.48
SMARCE1-209ENST00000478349 TSPOAP1O95153 1857 aa24.28■■□□□ 1.48
SMARCE1-209ENST00000478349 TEX14Q8IWB6 1497 aa24.28■■□□□ 1.48
SMARCE1-209ENST00000478349 WDR7Q9Y4E6 1490 aa24.27■■□□□ 1.48
SMARCE1-209ENST00000478349 ABCA8O94911 1581 aa24.22■■□□□ 1.47
SMARCE1-209ENST00000478349 MAP3K4Q9Y6R4 1608 aa24.2■■□□□ 1.46
SMARCE1-209ENST00000478349 PPRC1Q5VV67 1664 aaKnown RBP24.16■■□□□ 1.46
SMARCE1-209ENST00000478349 SAMD9Q5K651 1589 aa24.1■■□□□ 1.45
SMARCE1-209ENST00000478349 CD109Q6YHK3 1445 aa24.1■■□□□ 1.45
SMARCE1-209ENST00000478349 P3H3Q8IVL6 736 aa24.09■■□□□ 1.45
SMARCE1-209ENST00000478349 KCNH8Q96L42 1107 aa24.08■■□□□ 1.45
SMARCE1-209ENST00000478349 MAGI3Q5TCQ9 1506 aa24.08■■□□□ 1.45
SMARCE1-209ENST00000478349 CFAP43Q8NDM7 1665 aa24.07■■□□□ 1.44
SMARCE1-209ENST00000478349 ATP10BO94823 1461 aa24.01■■□□□ 1.43
SMARCE1-209ENST00000478349 KIF21BO75037 1637 aa24.01■■□□□ 1.43
SMARCE1-209ENST00000478349 COL17A1Q9UMD9 1497 aaPredicted RBP24■■□□□ 1.43
SMARCE1-209ENST00000478349 RAPGEF6Q8TEU7 1601 aa24■■□□□ 1.43
SMARCE1-209ENST00000478349 KDM4FA0A1W2PPD8 638 aa24■■□□□ 1.43
SMARCE1-209ENST00000478349 ARID3CA6NKF2 412 aa23.99■■□□□ 1.43
SMARCE1-209ENST00000478349 EFCAB5A4FU69 1503 aa23.99■■□□□ 1.43
SMARCE1-209ENST00000478349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.98■■□□□ 1.43
SMARCE1-209ENST00000478349 HNRNPUL2Q1KMD3 747 aaKnown RBP23.98■■□□□ 1.43
SMARCE1-209ENST00000478349 RANGAP1P46060 587 aaPredicted RBP23.96■■□□□ 1.43
SMARCE1-209ENST00000478349 PHLDB1Q86UU1 1377 aa23.95■■□□□ 1.42
SMARCE1-209ENST00000478349 FHOD3Q2V2M9 1422 aa23.94■■□□□ 1.42
SMARCE1-209ENST00000478349 SENP3Q9H4L4 574 aaPredicted RBP23.94■■□□□ 1.42
SMARCE1-209ENST00000478349 ADGRL1O94910 1474 aa23.93■■□□□ 1.42
SMARCE1-209ENST00000478349 NUP153P49790 1475 aaKnown RBP23.91■■□□□ 1.42
SMARCE1-209ENST00000478349 ABCA9Q8IUA7 1624 aa23.9■■□□□ 1.42
SMARCE1-209ENST00000478349 ARAP3Q8WWN8 1544 aa23.88■■□□□ 1.41
SMARCE1-209ENST00000478349 PLEKHD1A6NEE1 506 aa23.86■■□□□ 1.41
SMARCE1-209ENST00000478349 UBTFP17480 764 aaKnown RBP23.86■■□□□ 1.41
SMARCE1-209ENST00000478349 NEO1Q92859 1461 aa23.85■■□□□ 1.41
SMARCE1-209ENST00000478349 FMN1Q68DA7 1419 aa23.8■■□□□ 1.4
SMARCE1-209ENST00000478349 CFAP74Q9C0B2 1584 aa23.71■■□□□ 1.39
SMARCE1-209ENST00000478349 EHMT2Q96KQ7 1210 aa23.71■■□□□ 1.39
SMARCE1-209ENST00000478349 HECW1Q76N89 1606 aa23.7■■□□□ 1.39
SMARCE1-209ENST00000478349 CDK11AQ9UQ88 783 aaPredicted RBP23.7■■□□□ 1.38
SMARCE1-209ENST00000478349 FANCAO15360 1455 aa23.68■■□□□ 1.38
SMARCE1-209ENST00000478349 RAPGEF3O95398 923 aa23.67■■□□□ 1.38
SMARCE1-209ENST00000478349 ARHGAP35Q9NRY4 1499 aa23.67■■□□□ 1.38
SMARCE1-209ENST00000478349 CDK13Q14004 1512 aaKnown RBP23.66■■□□□ 1.38
SMARCE1-209ENST00000478349 ATP1B4Q9UN42 357 aaPredicted RBP23.66■■□□□ 1.38
SMARCE1-209ENST00000478349 DENND4BO75064 1496 aaPredicted RBP23.66■■□□□ 1.38
SMARCE1-209ENST00000478349 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.65■■□□□ 1.38
SMARCE1-209ENST00000478349 AKNAQ7Z591 1439 aa23.64■■□□□ 1.37
SMARCE1-209ENST00000478349 TTC37Q6PGP7 1564 aa23.61■■□□□ 1.37
SMARCE1-209ENST00000478349 PHF23Q9BUL5 403 aaPredicted RBP23.6■■□□□ 1.37
SMARCE1-209ENST00000478349 FRMPD1Q5SYB0 1578 aa23.6■■□□□ 1.37
SMARCE1-209ENST00000478349 CLIP1P30622 1438 aa23.59■■□□□ 1.37
SMARCE1-209ENST00000478349 ARHGEF40Q8TER5 1519 aa23.58■■□□□ 1.36
SMARCE1-209ENST00000478349 ARID4BQ4LE39 1312 aaPredicted RBP23.58■■□□□ 1.36
SMARCE1-209ENST00000478349 PLCH2O75038 1416 aa23.57■■□□□ 1.36
SMARCE1-209ENST00000478349 HECW2Q9P2P5 1572 aa23.54■■□□□ 1.36
SMARCE1-209ENST00000478349 KIF14Q15058 1648 aa23.54■■□□□ 1.36
SMARCE1-209ENST00000478349 MAGI2Q86UL8 1455 aa23.54■■□□□ 1.36
SMARCE1-209ENST00000478349 ZMYM4Q5VZL5 1548 aa23.54■■□□□ 1.36
SMARCE1-209ENST00000478349 TROQ12816 1431 aaPredicted RBP23.53■■□□□ 1.36
SMARCE1-209ENST00000478349 POGZQ7Z3K3 1410 aa23.52■■□□□ 1.36
SMARCE1-209ENST00000478349 EFCAB2Q5VUJ9 269 aa23.52■■□□□ 1.36
SMARCE1-209ENST00000478349 CCDC18Q5T9S5 1454 aa23.51■■□□□ 1.35
SMARCE1-209ENST00000478349 RICTORQ6R327 1708 aa23.5■■□□□ 1.35
SMARCE1-209ENST00000478349 ZFYVE16Q7Z3T8 1539 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 176.1 ms