RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 ABCA5Q8WWZ7 1642 aa19.3■□□□□ 0.68
CBWD3-206ENST00000478048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.3■□□□□ 0.68
CBWD3-206ENST00000478048 HNRNPUL2Q1KMD3 747 aaKnown RBP19.3■□□□□ 0.68
CBWD3-206ENST00000478048 GAPVD1Q14C86 1478 aa19.29■□□□□ 0.68
CBWD3-206ENST00000478048 RUSC2Q8N2Y8 1516 aa19.24■□□□□ 0.67
CBWD3-206ENST00000478048 KIF27Q86VH2 1401 aa19.24■□□□□ 0.67
CBWD3-206ENST00000478048 PBRM1Q86U86 1689 aa19.24■□□□□ 0.67
CBWD3-206ENST00000478048 GRIN2BQ13224 1484 aa19.22■□□□□ 0.67
CBWD3-206ENST00000478048 SNAPC4Q5SXM2 1469 aa19.19■□□□□ 0.66
CBWD3-206ENST00000478048 ERICH3Q5RHP9 1530 aa19.16■□□□□ 0.66
CBWD3-206ENST00000478048 IGF1RP08069 1367 aa19.16■□□□□ 0.66
CBWD3-206ENST00000478048 SAMD1Q6SPF0 538 aaPredicted RBP19.15■□□□□ 0.66
CBWD3-206ENST00000478048 ZNF219Q9P2Y4 722 aaPredicted RBP19.14■□□□□ 0.66
CBWD3-206ENST00000478048 MAGI1Q96QZ7 1491 aaPredicted RBP19.13■□□□□ 0.65
CBWD3-206ENST00000478048 TRHP20396 242 aaPredicted RBP19.11■□□□□ 0.65
CBWD3-206ENST00000478048 FAM9AQ8IZU1 332 aaPredicted RBP19.11■□□□□ 0.65
CBWD3-206ENST00000478048 ADAMTS12P58397 1594 aa19.09■□□□□ 0.65
CBWD3-206ENST00000478048 FBLN2P98095 1184 aa19.08■□□□□ 0.65
CBWD3-206ENST00000478048 CHD1O14646 1710 aa19.07■□□□□ 0.64
CBWD3-206ENST00000478048 SYNJ2O15056 1496 aa19.07■□□□□ 0.64
CBWD3-206ENST00000478048 FHAD1B1AJZ9 1412 aa19.06■□□□□ 0.64
CBWD3-206ENST00000478048 CHMP7Q8WUX9 453 aaPredicted RBP19.05■□□□□ 0.64
CBWD3-206ENST00000478048 EEA1Q15075 1411 aa19.05■□□□□ 0.64
CBWD3-206ENST00000478048 CSRNP3Q8WYN3 585 aa19.04■□□□□ 0.64
CBWD3-206ENST00000478048 CARMIL1Q5VZK9 1371 aa19.04■□□□□ 0.64
CBWD3-206ENST00000478048 CUL7Q14999 1698 aa19.04■□□□□ 0.64
CBWD3-206ENST00000478048 GRIN2AQ12879 1464 aa18.99■□□□□ 0.63
CBWD3-206ENST00000478048 MYCNP04198 464 aaPredicted RBP18.98■□□□□ 0.63
CBWD3-206ENST00000478048 PRXQ9BXM0 1461 aa18.96■□□□□ 0.63
CBWD3-206ENST00000478048 OSCARQ8IYS5 282 aa18.96■□□□□ 0.63
CBWD3-206ENST00000478048 SLC4A1APQ9BWU0 796 aaKnown RBP18.94■□□□□ 0.62
CBWD3-206ENST00000478048 RAPGEF2Q9Y4G8 1499 aa18.94■□□□□ 0.62
CBWD3-206ENST00000478048 ABCB7O75027 752 aa18.93■□□□□ 0.62
CBWD3-206ENST00000478048 CEP170Q5SW79 1584 aa18.91■□□□□ 0.62
CBWD3-206ENST00000478048 NUP160Q12769 1436 aa18.89■□□□□ 0.62
CBWD3-206ENST00000478048 EHMT2Q96KQ7 1210 aa18.88■□□□□ 0.61
CBWD3-206ENST00000478048 KIF21BO75037 1637 aa18.86■□□□□ 0.61
CBWD3-206ENST00000478048 CLASP1Q7Z460 1538 aa18.85■□□□□ 0.61
CBWD3-206ENST00000478048 KIAA0586Q9BVV6 1533 aa18.79■□□□□ 0.6
CBWD3-206ENST00000478048 GOLGA3Q08378 1498 aa18.77■□□□□ 0.6
CBWD3-206ENST00000478048 DNAJC5Q9H3Z4 198 aa18.76■□□□□ 0.59
CBWD3-206ENST00000478048 CTTNBP2Q8WZ74 1663 aa18.75■□□□□ 0.59
CBWD3-206ENST00000478048 FOXD4L1Q9NU39 408 aa18.74■□□□□ 0.59
CBWD3-206ENST00000478048 UBTFP17480 764 aaKnown RBP18.74■□□□□ 0.59
CBWD3-206ENST00000478048 JPH4Q96JJ6 628 aa18.73■□□□□ 0.59
CBWD3-206ENST00000478048 IQGAP2Q13576 1575 aa18.73■□□□□ 0.59
CBWD3-206ENST00000478048 SHROOM2Q13796 1616 aa18.71■□□□□ 0.59
CBWD3-206ENST00000478048 LOC105371045A0A1W2PR82 267 aa18.7■□□□□ 0.58
CBWD3-206ENST00000478048 ERCC6L2Q5T890 1561 aa18.67■□□□□ 0.58
CBWD3-206ENST00000478048 ARHGEF11O15085 1522 aa18.66■□□□□ 0.58
CBWD3-206ENST00000478048 PRG4Q92954 1404 aaPredicted RBP18.66■□□□□ 0.58
CBWD3-206ENST00000478048 RANGAP1P46060 587 aaPredicted RBP18.64■□□□□ 0.57
CBWD3-206ENST00000478048 RIMBP3CA6NJZ7 1639 aa18.63■□□□□ 0.57
CBWD3-206ENST00000478048 RIMBP3BA6NNM3 1639 aa18.63■□□□□ 0.57
CBWD3-206ENST00000478048 RIMBP3Q9UFD9 1639 aa18.63■□□□□ 0.57
CBWD3-206ENST00000478048 UGGT2Q9NYU1 1516 aa18.63■□□□□ 0.57
CBWD3-206ENST00000478048 DISP1Q96F81 1524 aa18.6■□□□□ 0.57
CBWD3-206ENST00000478048 POLA2Q14181 598 aa18.6■□□□□ 0.57
CBWD3-206ENST00000478048 TNIKQ9UKE5 1360 aa18.59■□□□□ 0.57
CBWD3-206ENST00000478048 KIAA0556O60303 1618 aa18.56■□□□□ 0.56
CBWD3-206ENST00000478048 CARMIL2Q6F5E8 1435 aa18.56■□□□□ 0.56
CBWD3-206ENST00000478048 ARAP1Q96P48 1450 aa18.55■□□□□ 0.56
CBWD3-206ENST00000478048 P3H3Q8IVL6 736 aa18.54■□□□□ 0.56
CBWD3-206ENST00000478048 SAMD9Q5K651 1589 aa18.53■□□□□ 0.56
CBWD3-206ENST00000478048 RBM42Q9BTD8 480 aaKnown RBP18.53■□□□□ 0.56
CBWD3-206ENST00000478048 TTBK1Q5TCY1 1321 aaPredicted RBP18.51■□□□□ 0.55
CBWD3-206ENST00000478048 POTEHQ6S545 545 aa18.51■□□□□ 0.55
CBWD3-206ENST00000478048 CYB5RLQ6IPT4 315 aa18.5■□□□□ 0.55
CBWD3-206ENST00000478048 ARHGAP35Q9NRY4 1499 aa18.48■□□□□ 0.55
CBWD3-206ENST00000478048 EFCAB5A4FU69 1503 aa18.48■□□□□ 0.55
CBWD3-206ENST00000478048 FHOD3Q2V2M9 1422 aa18.47■□□□□ 0.55
CBWD3-206ENST00000478048 PTPRGP23470 1445 aa18.46■□□□□ 0.55
CBWD3-206ENST00000478048 CLIP1P30622 1438 aa18.46■□□□□ 0.55
CBWD3-206ENST00000478048 CEP162Q5TB80 1403 aa18.46■□□□□ 0.55
CBWD3-206ENST00000478048 ATF5Q9Y2D1 282 aaPredicted RBP18.41■□□□□ 0.54
CBWD3-206ENST00000478048 PLB1Q6P1J6 1458 aa18.37■□□□□ 0.53
CBWD3-206ENST00000478048 ZBTB22O15209 634 aa18.35■□□□□ 0.53
CBWD3-206ENST00000478048 UACAQ9BZF9 1416 aa18.35■□□□□ 0.53
CBWD3-206ENST00000478048 ADCY10Q96PN6 1610 aa18.34■□□□□ 0.53
CBWD3-206ENST00000478048 ZBTB12Q9Y330 459 aaPredicted RBP18.34■□□□□ 0.53
CBWD3-206ENST00000478048 ABCA8O94911 1581 aa18.33■□□□□ 0.53
CBWD3-206ENST00000478048 FMN1Q68DA7 1419 aa18.31■□□□□ 0.52
CBWD3-206ENST00000478048 ABCC2Q92887 1545 aa18.3■□□□□ 0.52
CBWD3-206ENST00000478048 UHRF1BP1LA0JNW5 1464 aa18.29■□□□□ 0.52
CBWD3-206ENST00000478048 RAPGEF6Q8TEU7 1601 aa18.29■□□□□ 0.52
CBWD3-206ENST00000478048 ARID3CA6NKF2 412 aa18.26■□□□□ 0.51
CBWD3-206ENST00000478048 PCF11O94913 1555 aaKnown RBP18.24■□□□□ 0.51
CBWD3-206ENST00000478048 NUP153P49790 1475 aaKnown RBP18.24■□□□□ 0.51
CBWD3-206ENST00000478048 ATXN8OSP0DMR3 200 aa18.23■□□□□ 0.51
CBWD3-206ENST00000478048 ATP1B4Q9UN42 357 aaPredicted RBP18.23■□□□□ 0.51
CBWD3-206ENST00000478048 KDM5BQ9UGL1 1544 aa18.22■□□□□ 0.51
CBWD3-206ENST00000478048 CASKIN1Q8WXD9 1431 aa18.21■□□□□ 0.51
CBWD3-206ENST00000478048 NPM1P06748 294 aaKnown RBP eCLIP18.21■□□□□ 0.51
CBWD3-206ENST00000478048 VPS8Q8N3P4 1428 aa18.21■□□□□ 0.51
CBWD3-206ENST00000478048 ZCCHC11Q5TAX3 1644 aaKnown RBP18.2■□□□□ 0.5
CBWD3-206ENST00000478048 ATP10BO94823 1461 aa18.2■□□□□ 0.5
CBWD3-206ENST00000478048 HECW1Q76N89 1606 aa18.2■□□□□ 0.5
CBWD3-206ENST00000478048 LRRIQ1Q96JM4 1722 aa18.19■□□□□ 0.5
CBWD3-206ENST00000478048 FYCO1Q9BQS8 1478 aa18.18■□□□□ 0.5
CBWD3-206ENST00000478048 CDK13Q14004 1512 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms