RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 AEBP2Q6ZN18 517 aaPredicted RBP32.4■■■□□ 2.78
CBWD3-206ENST00000478048 CHIC1Q5VXU3 224 aa30.84■■■□□ 2.53
CBWD3-206ENST00000478048 SENP3Q9H4L4 574 aaPredicted RBP27.78■■■□□ 2.04
CBWD3-206ENST00000478048 PHF23Q9BUL5 403 aaPredicted RBP27.36■■□□□ 1.97
CBWD3-206ENST00000478048 NISCHQ9Y2I1 1504 aa27.26■■□□□ 1.96
CBWD3-206ENST00000478048 FOXD1Q16676 465 aa25.81■■□□□ 1.72
CBWD3-206ENST00000478048 PLPPR3Q6T4P5 718 aa24.69■■□□□ 1.54
CBWD3-206ENST00000478048 MSH5O43196 834 aa24.26■■□□□ 1.47
CBWD3-206ENST00000478048 PIAS4Q8N2W9 510 aaPredicted RBP24.15■■□□□ 1.46
CBWD3-206ENST00000478048 PPP6R1Q9UPN7 881 aa24.07■■□□□ 1.44
CBWD3-206ENST00000478048 CCDC180Q9P1Z9 1646 aa24.06■■□□□ 1.44
CBWD3-206ENST00000478048 ADRA2BP18089 450 aa24.01■■□□□ 1.43
CBWD3-206ENST00000478048 POTEDQ86YR6 584 aa23.59■■□□□ 1.37
CBWD3-206ENST00000478048 ABCC9O60706 1549 aa23.32■■□□□ 1.32
CBWD3-206ENST00000478048 ZCCHC6Q5VYS8 1495 aaKnown RBP22.78■■□□□ 1.24
CBWD3-206ENST00000478048 DCAF8L2P0C7V8 631 aa22.71■■□□□ 1.23
CBWD3-206ENST00000478048 NACADO15069 1562 aa22.55■■□□□ 1.2
CBWD3-206ENST00000478048 DCAF1Q9Y4B6 1507 aa22.52■■□□□ 1.2
CBWD3-206ENST00000478048 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
CBWD3-206ENST00000478048 MYO15BQ96JP2 1530 aa22.49■■□□□ 1.19
CBWD3-206ENST00000478048 SCAF1Q9H7N4 1312 aaKnown RBP22.13■■□□□ 1.13
CBWD3-206ENST00000478048 UNC13AQ9UPW8 1703 aa22.06■■□□□ 1.12
CBWD3-206ENST00000478048 SCRIBQ14160 1630 aa22.05■■□□□ 1.12
CBWD3-206ENST00000478048 MAPK8IP2Q13387 824 aaPredicted RBP22.03■■□□□ 1.12
CBWD3-206ENST00000478048 DMRT2Q9Y5R5 561 aa22■■□□□ 1.11
CBWD3-206ENST00000478048 PABPN1Q86U42 306 aaKnown RBP eCLIP21.88■■□□□ 1.09
CBWD3-206ENST00000478048 BICRAQ9NZM4 1560 aa21.86■■□□□ 1.09
CBWD3-206ENST00000478048 SHROOM4Q9ULL8 1493 aa21.81■■□□□ 1.08
CBWD3-206ENST00000478048 PPP4R3CPQ6ZMV5 832 aa21.6■■□□□ 1.05
CBWD3-206ENST00000478048 CECR2Q9BXF3 1484 aa21.26■□□□□ 0.99
CBWD3-206ENST00000478048 EIF4G1Q04637 1599 aaKnown RBP21.24■□□□□ 0.99
CBWD3-206ENST00000478048 CNKSR2Q8WXI2 1034 aa21.24■□□□□ 0.99
CBWD3-206ENST00000478048 HOXD11P31277 338 aaPredicted RBP21.19■□□□□ 0.98
CBWD3-206ENST00000478048 DNAJC5BQ9UF47 199 aa21.17■□□□□ 0.98
CBWD3-206ENST00000478048 SMARCA4P51532 1647 aa21.09■□□□□ 0.97
CBWD3-206ENST00000478048 CC2D2AQ9P2K1 1620 aa21.09■□□□□ 0.97
CBWD3-206ENST00000478048 BAZ1AQ9NRL2 1556 aaPredicted RBP21.09■□□□□ 0.97
CBWD3-206ENST00000478048 DCAF8L1A6NGE4 600 aa21.07■□□□□ 0.96
CBWD3-206ENST00000478048 RNF216Q9NWF9 866 aaPredicted RBP21.05■□□□□ 0.96
CBWD3-206ENST00000478048 MROH2BQ7Z745 1585 aa21.05■□□□□ 0.96
CBWD3-206ENST00000478048 RSF1Q96T23 1441 aaPredicted RBP20.91■□□□□ 0.94
CBWD3-206ENST00000478048 ATAD2BQ9ULI0 1458 aa20.9■□□□□ 0.94
CBWD3-206ENST00000478048 SMARCA2P51531 1590 aa20.85■□□□□ 0.93
CBWD3-206ENST00000478048 PEG3Q9GZU2 1588 aa20.85■□□□□ 0.93
CBWD3-206ENST00000478048 NCBP3Q53F19 620 aaKnown RBP20.85■□□□□ 0.93
CBWD3-206ENST00000478048 WIZO95785 1651 aa20.85■□□□□ 0.93
CBWD3-206ENST00000478048 NCAPD3P42695 1498 aa20.82■□□□□ 0.92
CBWD3-206ENST00000478048 CACNB1Q02641 598 aaPredicted RBP20.77■□□□□ 0.92
CBWD3-206ENST00000478048 HMGXB3Q12766 1538 aa20.73■□□□□ 0.91
CBWD3-206ENST00000478048 BAZ1BQ9UIG0 1483 aaKnown RBP20.73■□□□□ 0.91
CBWD3-206ENST00000478048 SUPT5HO00267 1087 aaKnown RBP20.67■□□□□ 0.9
CBWD3-206ENST00000478048 RNF39Q9H2S5 420 aa20.64■□□□□ 0.89
CBWD3-206ENST00000478048 TOP2AP11388 1531 aaKnown RBP20.6■□□□□ 0.89
CBWD3-206ENST00000478048 NPM3O75607 178 aaKnown RBP20.44■□□□□ 0.86
CBWD3-206ENST00000478048 C1QBPQ07021 282 aaKnown RBP20.4■□□□□ 0.86
CBWD3-206ENST00000478048 CCDC88BA6NC98 1476 aa20.39■□□□□ 0.85
CBWD3-206ENST00000478048 NESP48681 1621 aa20.29■□□□□ 0.84
CBWD3-206ENST00000478048 CADPSQ9ULU8 1353 aa20.24■□□□□ 0.83
CBWD3-206ENST00000478048 LAMC3Q9Y6N6 1575 aa20.21■□□□□ 0.83
CBWD3-206ENST00000478048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.19■□□□□ 0.82
CBWD3-206ENST00000478048 CFTRP13569 1480 aa20.18■□□□□ 0.82
CBWD3-206ENST00000478048 PDS5BQ9NTI5 1447 aa20.06■□□□□ 0.8
CBWD3-206ENST00000478048 PRDM2Q13029 1718 aa20.04■□□□□ 0.8
CBWD3-206ENST00000478048 ERCC6Q03468 1493 aa20.04■□□□□ 0.8
CBWD3-206ENST00000478048 KIF21AQ7Z4S6 1674 aa20.04■□□□□ 0.8
CBWD3-206ENST00000478048 FANCD2Q9BXW9 1451 aa20.02■□□□□ 0.79
CBWD3-206ENST00000478048 KCNA4P22459 653 aa20.01■□□□□ 0.79
CBWD3-206ENST00000478048 CEP164Q9UPV0 1460 aa19.95■□□□□ 0.78
CBWD3-206ENST00000478048 THOC2Q8NI27 1593 aaKnown RBP19.87■□□□□ 0.77
CBWD3-206ENST00000478048 MRC2Q9UBG0 1479 aa19.85■□□□□ 0.77
CBWD3-206ENST00000478048 URB2Q14146 1524 aaKnown RBP19.81■□□□□ 0.76
CBWD3-206ENST00000478048 WDR62O43379 1518 aa19.77■□□□□ 0.76
CBWD3-206ENST00000478048 ABCC8Q09428 1581 aa19.77■□□□□ 0.76
CBWD3-206ENST00000478048 TOPBP1Q92547 1522 aa19.74■□□□□ 0.75
CBWD3-206ENST00000478048 DNMBPQ6XZF7 1577 aa19.72■□□□□ 0.75
CBWD3-206ENST00000478048 U3KPZ7 1027 aaPredicted RBP19.72■□□□□ 0.75
CBWD3-206ENST00000478048 CUX1P39880 1505 aa19.72■□□□□ 0.75
CBWD3-206ENST00000478048 WRNQ14191 1432 aaPredicted RBP eCLIP19.69■□□□□ 0.74
CBWD3-206ENST00000478048 CUX2O14529 1486 aa19.68■□□□□ 0.74
CBWD3-206ENST00000478048 SYNJ1O43426 1573 aa19.66■□□□□ 0.74
CBWD3-206ENST00000478048 TOP2BQ02880 1626 aa19.61■□□□□ 0.73
CBWD3-206ENST00000478048 BIVM-ERCC5R4GMW8 1640 aa19.6■□□□□ 0.73
CBWD3-206ENST00000478048 POLA1P09884 1462 aaPredicted RBP19.6■□□□□ 0.73
CBWD3-206ENST00000478048 FGD5Q6ZNL6 1462 aa19.6■□□□□ 0.73
CBWD3-206ENST00000478048 RAD54L2Q9Y4B4 1467 aa19.54■□□□□ 0.72
CBWD3-206ENST00000478048 SOGA1O94964 1423 aa19.52■□□□□ 0.71
CBWD3-206ENST00000478048 IFT140Q96RY7 1462 aa19.51■□□□□ 0.71
CBWD3-206ENST00000478048 SLC4A2P04920 1241 aa19.5■□□□□ 0.71
CBWD3-206ENST00000478048 TARBP1Q13395 1621 aaKnown RBP19.5■□□□□ 0.71
CBWD3-206ENST00000478048 TRIM41Q8WV44 630 aa19.45■□□□□ 0.7
CBWD3-206ENST00000478048 ZNF608Q9ULD9 1512 aaPredicted RBP19.45■□□□□ 0.7
CBWD3-206ENST00000478048 CAPN15O75808 1086 aa19.44■□□□□ 0.7
CBWD3-206ENST00000478048 SPINK5Q9NQ38 1064 aaPredicted RBP19.41■□□□□ 0.7
CBWD3-206ENST00000478048 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
CBWD3-206ENST00000478048 ABCA10Q8WWZ4 1543 aa19.4■□□□□ 0.7
CBWD3-206ENST00000478048 TDRD9Q8NDG6 1382 aaKnown RBP19.4■□□□□ 0.7
CBWD3-206ENST00000478048 AQRO60306 1485 aaKnown RBP eCLIP19.38■□□□□ 0.69
CBWD3-206ENST00000478048 EIF4G3O43432 1585 aaKnown RBP19.36■□□□□ 0.69
CBWD3-206ENST00000478048 APLP2Q06481 763 aa19.34■□□□□ 0.69
CBWD3-206ENST00000478048 DSG3P32926 999 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms