RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 TRHP20396 242 aaPredicted RBP23.62■■□□□ 1.37
HDAC7-222ENST00000477937 CARMIL1Q5VZK9 1371 aa23.62■■□□□ 1.37
HDAC7-222ENST00000477937 PRG4Q92954 1404 aaPredicted RBP23.6■■□□□ 1.37
HDAC7-222ENST00000477937 KIAA0586Q9BVV6 1533 aa23.56■■□□□ 1.36
HDAC7-222ENST00000477937 RAPGEF2Q9Y4G8 1499 aa23.43■■□□□ 1.34
HDAC7-222ENST00000477937 IQGAP2Q13576 1575 aa23.4■■□□□ 1.34
HDAC7-222ENST00000477937 CARMIL2Q6F5E8 1435 aa23.34■■□□□ 1.33
HDAC7-222ENST00000477937 NPM1P06748 294 aaKnown RBP eCLIP23.31■■□□□ 1.32
HDAC7-222ENST00000477937 PTPRGP23470 1445 aa23.29■■□□□ 1.32
HDAC7-222ENST00000477937 ADCY10Q96PN6 1610 aa23.29■■□□□ 1.32
HDAC7-222ENST00000477937 CTTNBP2Q8WZ74 1663 aa23.28■■□□□ 1.32
HDAC7-222ENST00000477937 TNIKQ9UKE5 1360 aa23.27■■□□□ 1.32
HDAC7-222ENST00000477937 PRXQ9BXM0 1461 aa23.25■■□□□ 1.31
HDAC7-222ENST00000477937 TTBK1Q5TCY1 1321 aaPredicted RBP23.25■■□□□ 1.31
HDAC7-222ENST00000477937 UGGT2Q9NYU1 1516 aa23.24■■□□□ 1.31
HDAC7-222ENST00000477937 DISP1Q96F81 1524 aa23.23■■□□□ 1.31
HDAC7-222ENST00000477937 KIF13AQ9H1H9 1805 aa23.22■■□□□ 1.31
HDAC7-222ENST00000477937 CSRNP3Q8WYN3 585 aa23.2■■□□□ 1.3
HDAC7-222ENST00000477937 MAPKBP1O60336 1514 aa23.19■■□□□ 1.3
HDAC7-222ENST00000477937 KIAA0556O60303 1618 aa23.17■■□□□ 1.3
HDAC7-222ENST00000477937 EEA1Q15075 1411 aa23.16■■□□□ 1.3
HDAC7-222ENST00000477937 ABCC10Q5T3U5 1492 aa23.12■■□□□ 1.29
HDAC7-222ENST00000477937 FAM69CQ0P6D2 419 aa23.12■■□□□ 1.29
HDAC7-222ENST00000477937 GOLGA3Q08378 1498 aa23.11■■□□□ 1.29
HDAC7-222ENST00000477937 UACAQ9BZF9 1416 aa23.11■■□□□ 1.29
HDAC7-222ENST00000477937 ABCC2Q92887 1545 aa23.11■■□□□ 1.29
HDAC7-222ENST00000477937 UHRF1BP1LA0JNW5 1464 aa23.11■■□□□ 1.29
HDAC7-222ENST00000477937 DIP2BQ9P265 1576 aa23.09■■□□□ 1.29
HDAC7-222ENST00000477937 CHIC1Q5VXU3 224 aa23.06■■□□□ 1.28
HDAC7-222ENST00000477937 FAM9AQ8IZU1 332 aaPredicted RBP23.06■■□□□ 1.28
HDAC7-222ENST00000477937 KDM5BQ9UGL1 1544 aa23■■□□□ 1.27
HDAC7-222ENST00000477937 ASXL2Q76L83 1435 aa22.99■■□□□ 1.27
HDAC7-222ENST00000477937 PLB1Q6P1J6 1458 aa22.99■■□□□ 1.27
HDAC7-222ENST00000477937 TSPOAP1O95153 1857 aa22.99■■□□□ 1.27
HDAC7-222ENST00000477937 ZCCHC11Q5TAX3 1644 aaKnown RBP22.97■■□□□ 1.27
HDAC7-222ENST00000477937 KIF21BO75037 1637 aa22.95■■□□□ 1.26
HDAC7-222ENST00000477937 P3H3Q8IVL6 736 aa22.93■■□□□ 1.26
HDAC7-222ENST00000477937 ABCA8O94911 1581 aa22.93■■□□□ 1.26
HDAC7-222ENST00000477937 SAMD9Q5K651 1589 aa22.91■■□□□ 1.26
HDAC7-222ENST00000477937 GLI2P10070 1586 aa22.9■■□□□ 1.26
HDAC7-222ENST00000477937 RANGAP1P46060 587 aaPredicted RBP22.86■■□□□ 1.25
HDAC7-222ENST00000477937 EPRSP07814 1512 aaKnown RBP22.86■■□□□ 1.25
HDAC7-222ENST00000477937 WDR7Q9Y4E6 1490 aa22.83■■□□□ 1.25
HDAC7-222ENST00000477937 KDM6BO15054 1643 aa22.82■■□□□ 1.24
HDAC7-222ENST00000477937 PPRC1Q5VV67 1664 aaKnown RBP22.8■■□□□ 1.24
HDAC7-222ENST00000477937 MAP3K4Q9Y6R4 1608 aa22.79■■□□□ 1.24
HDAC7-222ENST00000477937 UBTFP17480 764 aaKnown RBP22.79■■□□□ 1.24
HDAC7-222ENST00000477937 EHMT2Q96KQ7 1210 aa22.79■■□□□ 1.24
HDAC7-222ENST00000477937 RAPGEF6Q8TEU7 1601 aa22.78■■□□□ 1.24
HDAC7-222ENST00000477937 EFCAB5A4FU69 1503 aa22.76■■□□□ 1.23
HDAC7-222ENST00000477937 KCNH8Q96L42 1107 aa22.75■■□□□ 1.23
HDAC7-222ENST00000477937 FHOD3Q2V2M9 1422 aa22.74■■□□□ 1.23
HDAC7-222ENST00000477937 ATP10BO94823 1461 aa22.74■■□□□ 1.23
HDAC7-222ENST00000477937 ARID3CA6NKF2 412 aa22.74■■□□□ 1.23
HDAC7-222ENST00000477937 TEX14Q8IWB6 1497 aa22.72■■□□□ 1.23
HDAC7-222ENST00000477937 CFAP43Q8NDM7 1665 aa22.71■■□□□ 1.23
HDAC7-222ENST00000477937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.68■■□□□ 1.22
HDAC7-222ENST00000477937 HNRNPUL2Q1KMD3 747 aaKnown RBP22.68■■□□□ 1.22
HDAC7-222ENST00000477937 AEBP2Q6ZN18 517 aaPredicted RBP22.67■■□□□ 1.22
HDAC7-222ENST00000477937 CD109Q6YHK3 1445 aa22.66■■□□□ 1.22
HDAC7-222ENST00000477937 NUP153P49790 1475 aaKnown RBP22.66■■□□□ 1.22
HDAC7-222ENST00000477937 MAGI3Q5TCQ9 1506 aa22.62■■□□□ 1.21
HDAC7-222ENST00000477937 ARHGAP35Q9NRY4 1499 aa22.59■■□□□ 1.21
HDAC7-222ENST00000477937 COL17A1Q9UMD9 1497 aaPredicted RBP22.59■■□□□ 1.21
HDAC7-222ENST00000477937 ABCA9Q8IUA7 1624 aa22.57■■□□□ 1.2
HDAC7-222ENST00000477937 PLEKHD1A6NEE1 506 aa22.57■■□□□ 1.2
HDAC7-222ENST00000477937 FMN1Q68DA7 1419 aa22.56■■□□□ 1.2
HDAC7-222ENST00000477937 ATP1B4Q9UN42 357 aaPredicted RBP22.51■■□□□ 1.19
HDAC7-222ENST00000477937 HECW1Q76N89 1606 aa22.49■■□□□ 1.19
HDAC7-222ENST00000477937 CDK13Q14004 1512 aaKnown RBP22.47■■□□□ 1.19
HDAC7-222ENST00000477937 PHLDB1Q86UU1 1377 aa22.46■■□□□ 1.19
HDAC7-222ENST00000477937 ARAP3Q8WWN8 1544 aa22.44■■□□□ 1.18
HDAC7-222ENST00000477937 NEO1Q92859 1461 aa22.41■■□□□ 1.18
HDAC7-222ENST00000477937 KDM4FA0A1W2PPD8 638 aa22.41■■□□□ 1.18
HDAC7-222ENST00000477937 CDK11AQ9UQ88 783 aaPredicted RBP22.41■■□□□ 1.18
HDAC7-222ENST00000477937 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.41■■□□□ 1.182e-6■■■□□ 16.6
HDAC7-222ENST00000477937 LRRIQ1Q96JM4 1722 aa22.37■■□□□ 1.17
HDAC7-222ENST00000477937 TTC37Q6PGP7 1564 aa22.37■■□□□ 1.17
HDAC7-222ENST00000477937 CLIP1P30622 1438 aa22.36■■□□□ 1.17
HDAC7-222ENST00000477937 CFAP74Q9C0B2 1584 aa22.34■■□□□ 1.17
HDAC7-222ENST00000477937 CASKIN1Q8WXD9 1431 aa22.33■■□□□ 1.17
HDAC7-222ENST00000477937 PCF11O94913 1555 aaKnown RBP22.33■■□□□ 1.16
HDAC7-222ENST00000477937 RAPGEF3O95398 923 aa22.32■■□□□ 1.16
HDAC7-222ENST00000477937 FANCAO15360 1455 aa22.32■■□□□ 1.16
HDAC7-222ENST00000477937 ADGRL1O94910 1474 aa22.32■■□□□ 1.16
HDAC7-222ENST00000477937 AKNAQ7Z591 1439 aa22.3■■□□□ 1.16
HDAC7-222ENST00000477937 TROQ12816 1431 aaPredicted RBP22.29■■□□□ 1.16
HDAC7-222ENST00000477937 MYO5CQ9NQX4 1742 aa22.28■■□□□ 1.16
HDAC7-222ENST00000477937 CCDC18Q5T9S5 1454 aa22.28■■□□□ 1.16
HDAC7-222ENST00000477937 KIF14Q15058 1648 aa22.28■■□□□ 1.16
HDAC7-222ENST00000477937 PLCH2O75038 1416 aa22.27■■□□□ 1.16
HDAC7-222ENST00000477937 FYCO1Q9BQS8 1478 aa22.27■■□□□ 1.16
HDAC7-222ENST00000477937 DENND4BO75064 1496 aaPredicted RBP22.26■■□□□ 1.15
HDAC7-222ENST00000477937 FRMPD1Q5SYB0 1578 aa22.25■■□□□ 1.15
HDAC7-222ENST00000477937 RICTORQ6R327 1708 aa22.25■■□□□ 1.15
HDAC7-222ENST00000477937 EFCAB2Q5VUJ9 269 aa22.21■■□□□ 1.15
HDAC7-222ENST00000477937 CEP162Q5TB80 1403 aa22.18■■□□□ 1.14
HDAC7-222ENST00000477937 SCAPERQ9BY12 1400 aa22.17■■□□□ 1.14
HDAC7-222ENST00000477937 CDC42BPBQ9Y5S2 1711 aa22.16■■□□□ 1.14
HDAC7-222ENST00000477937 ARHGAP5Q13017 1502 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms