RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 KIF13AQ9H1H9 1805 aa20.6■□□□□ 0.89
CPSF7-211ENST00000477890 IGF1RP08069 1367 aa20.59■□□□□ 0.89
CPSF7-211ENST00000477890 CUL7Q14999 1698 aa20.59■□□□□ 0.89
CPSF7-211ENST00000477890 AEBP2Q6ZN18 517 aaPredicted RBP20.57■□□□□ 0.88
CPSF7-211ENST00000477890 KIAA0586Q9BVV6 1533 aa20.56■□□□□ 0.88
CPSF7-211ENST00000477890 NPM1P06748 294 aaKnown RBP eCLIP20.52■□□□□ 0.88
CPSF7-211ENST00000477890 ADCY10Q96PN6 1610 aa20.5■□□□□ 0.87
CPSF7-211ENST00000477890 MAPKBP1O60336 1514 aa20.48■□□□□ 0.87
CPSF7-211ENST00000477890 CARMIL1Q5VZK9 1371 aa20.47■□□□□ 0.87
CPSF7-211ENST00000477890 FAM69CQ0P6D2 419 aa20.47■□□□□ 0.87
CPSF7-211ENST00000477890 ABCC10Q5T3U5 1492 aa20.47■□□□□ 0.87
CPSF7-211ENST00000477890 DIP2BQ9P265 1576 aa20.42■□□□□ 0.86
CPSF7-211ENST00000477890 PTPRGP23470 1445 aa20.39■□□□□ 0.85
CPSF7-211ENST00000477890 TTBK1Q5TCY1 1321 aaPredicted RBP20.39■□□□□ 0.85
CPSF7-211ENST00000477890 IQGAP2Q13576 1575 aa20.37■□□□□ 0.85
CPSF7-211ENST00000477890 CARMIL2Q6F5E8 1435 aa20.36■□□□□ 0.85
CPSF7-211ENST00000477890 TNIKQ9UKE5 1360 aa20.34■□□□□ 0.85
CPSF7-211ENST00000477890 TSPOAP1O95153 1857 aa20.33■□□□□ 0.85
CPSF7-211ENST00000477890 ABCC2Q92887 1545 aa20.28■□□□□ 0.84
CPSF7-211ENST00000477890 KDM6BO15054 1643 aa20.28■□□□□ 0.84
CPSF7-211ENST00000477890 RAPGEF2Q9Y4G8 1499 aa20.28■□□□□ 0.84
CPSF7-211ENST00000477890 DISP1Q96F81 1524 aa20.27■□□□□ 0.83
CPSF7-211ENST00000477890 UHRF1BP1LA0JNW5 1464 aa20.24■□□□□ 0.83
CPSF7-211ENST00000477890 ASXL2Q76L83 1435 aa20.23■□□□□ 0.83
CPSF7-211ENST00000477890 UACAQ9BZF9 1416 aa20.23■□□□□ 0.83
CPSF7-211ENST00000477890 UGGT2Q9NYU1 1516 aa20.22■□□□□ 0.83
CPSF7-211ENST00000477890 PLB1Q6P1J6 1458 aa20.22■□□□□ 0.83
CPSF7-211ENST00000477890 KIAA0556O60303 1618 aa20.19■□□□□ 0.82
CPSF7-211ENST00000477890 GLI2P10070 1586 aa20.17■□□□□ 0.82
CPSF7-211ENST00000477890 PPRC1Q5VV67 1664 aaKnown RBP20.16■□□□□ 0.82
CPSF7-211ENST00000477890 CTTNBP2Q8WZ74 1663 aa20.16■□□□□ 0.82
CPSF7-211ENST00000477890 KDM5BQ9UGL1 1544 aa20.15■□□□□ 0.82
CPSF7-211ENST00000477890 ZCCHC11Q5TAX3 1644 aaKnown RBP20.13■□□□□ 0.81
CPSF7-211ENST00000477890 EPRSP07814 1512 aaKnown RBP20.11■□□□□ 0.81
CPSF7-211ENST00000477890 KDM4FA0A1W2PPD8 638 aa20.08■□□□□ 0.81
CPSF7-211ENST00000477890 MAP3K4Q9Y6R4 1608 aa20.08■□□□□ 0.8
CPSF7-211ENST00000477890 GOLGA3Q08378 1498 aa20.06■□□□□ 0.8
CPSF7-211ENST00000477890 PRXQ9BXM0 1461 aa20.05■□□□□ 0.8
CPSF7-211ENST00000477890 TEX14Q8IWB6 1497 aa20.02■□□□□ 0.8
CPSF7-211ENST00000477890 WDR7Q9Y4E6 1490 aa20.02■□□□□ 0.8
CPSF7-211ENST00000477890 ABCA8O94911 1581 aa20■□□□□ 0.79
CPSF7-211ENST00000477890 COL17A1Q9UMD9 1497 aaPredicted RBP20■□□□□ 0.79
CPSF7-211ENST00000477890 KCNH8Q96L42 1107 aa19.94■□□□□ 0.78
CPSF7-211ENST00000477890 CFAP43Q8NDM7 1665 aa19.93■□□□□ 0.78
CPSF7-211ENST00000477890 ADGRL1O94910 1474 aa19.92■□□□□ 0.78
CPSF7-211ENST00000477890 P3H3Q8IVL6 736 aa19.91■□□□□ 0.78
CPSF7-211ENST00000477890 CD109Q6YHK3 1445 aa19.91■□□□□ 0.78
CPSF7-211ENST00000477890 MAGI3Q5TCQ9 1506 aa19.89■□□□□ 0.77
CPSF7-211ENST00000477890 FAM9AQ8IZU1 332 aaPredicted RBP19.89■□□□□ 0.77
CPSF7-211ENST00000477890 CSRNP3Q8WYN3 585 aa19.88■□□□□ 0.77
CPSF7-211ENST00000477890 ARID3CA6NKF2 412 aa19.87■□□□□ 0.77
CPSF7-211ENST00000477890 SAMD9Q5K651 1589 aa19.83■□□□□ 0.77
CPSF7-211ENST00000477890 ATP10BO94823 1461 aa19.83■□□□□ 0.76
CPSF7-211ENST00000477890 RAPGEF6Q8TEU7 1601 aa19.79■□□□□ 0.76
CPSF7-211ENST00000477890 EEA1Q15075 1411 aa19.77■□□□□ 0.76
CPSF7-211ENST00000477890 RANGAP1P46060 587 aaPredicted RBP19.76■□□□□ 0.75
CPSF7-211ENST00000477890 ABCA9Q8IUA7 1624 aa19.75■□□□□ 0.75
CPSF7-211ENST00000477890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.74■□□□□ 0.75
CPSF7-211ENST00000477890 HNRNPUL2Q1KMD3 747 aaKnown RBP19.74■□□□□ 0.75
CPSF7-211ENST00000477890 ARAP3Q8WWN8 1544 aa19.73■□□□□ 0.75
CPSF7-211ENST00000477890 KIF21BO75037 1637 aa19.72■□□□□ 0.75
CPSF7-211ENST00000477890 FHOD3Q2V2M9 1422 aa19.71■□□□□ 0.75
CPSF7-211ENST00000477890 NUP153P49790 1475 aaKnown RBP19.7■□□□□ 0.74
CPSF7-211ENST00000477890 HECW2Q9P2P5 1572 aa19.68■□□□□ 0.74
CPSF7-211ENST00000477890 PHLDB1Q86UU1 1377 aa19.68■□□□□ 0.74
CPSF7-211ENST00000477890 NEO1Q92859 1461 aa19.65■□□□□ 0.74
CPSF7-211ENST00000477890 RAPGEF3O95398 923 aa19.63■□□□□ 0.73
CPSF7-211ENST00000477890 EFCAB5A4FU69 1503 aa19.61■□□□□ 0.73
CPSF7-211ENST00000477890 PLEKHD1A6NEE1 506 aa19.61■□□□□ 0.73
CPSF7-211ENST00000477890 FRMPD1Q5SYB0 1578 aa19.58■□□□□ 0.73
CPSF7-211ENST00000477890 ILDR1Q86SU0 546 aaPredicted RBP19.55■□□□□ 0.72
CPSF7-211ENST00000477890 EHMT2Q96KQ7 1210 aa19.55■□□□□ 0.72
CPSF7-211ENST00000477890 ADAMTSL3P82987 1691 aa19.54■□□□□ 0.72
CPSF7-211ENST00000477890 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.54■□□□□ 0.72
CPSF7-211ENST00000477890 UBTFP17480 764 aaKnown RBP19.52■□□□□ 0.72
CPSF7-211ENST00000477890 FANCAO15360 1455 aa19.52■□□□□ 0.72
CPSF7-211ENST00000477890 DENND4BO75064 1496 aaPredicted RBP19.52■□□□□ 0.72
CPSF7-211ENST00000477890 TTC37Q6PGP7 1564 aa19.52■□□□□ 0.71
CPSF7-211ENST00000477890 CFAP74Q9C0B2 1584 aa19.52■□□□□ 0.71
CPSF7-211ENST00000477890 ARID4BQ4LE39 1312 aaPredicted RBP19.51■□□□□ 0.71
CPSF7-211ENST00000477890 AKNAQ7Z591 1439 aa19.51■□□□□ 0.71
CPSF7-211ENST00000477890 CDK13Q14004 1512 aaKnown RBP19.51■□□□□ 0.71
CPSF7-211ENST00000477890 BCORL1Q5H9F3 1711 aa19.51■□□□□ 0.71
CPSF7-211ENST00000477890 RICTORQ6R327 1708 aa19.51■□□□□ 0.71
CPSF7-211ENST00000477890 PTPRMP28827 1452 aa19.5■□□□□ 0.71
CPSF7-211ENST00000477890 ARHGEF40Q8TER5 1519 aa19.49■□□□□ 0.71
CPSF7-211ENST00000477890 MADDQ8WXG6 1647 aa19.47■□□□□ 0.71
CPSF7-211ENST00000477890 ATP1B4Q9UN42 357 aaPredicted RBP19.46■□□□□ 0.71
CPSF7-211ENST00000477890 FMN1Q68DA7 1419 aa19.45■□□□□ 0.7
CPSF7-211ENST00000477890 HECW1Q76N89 1606 aa19.45■□□□□ 0.7
CPSF7-211ENST00000477890 CHIC1Q5VXU3 224 aa19.45■□□□□ 0.7
CPSF7-211ENST00000477890 ARHGAP35Q9NRY4 1499 aa19.43■□□□□ 0.7
CPSF7-211ENST00000477890 ZMYM4Q5VZL5 1548 aa19.42■□□□□ 0.7
CPSF7-211ENST00000477890 PLCH2O75038 1416 aa19.41■□□□□ 0.7
CPSF7-211ENST00000477890 ZFYVE16Q7Z3T8 1539 aa19.41■□□□□ 0.7
CPSF7-211ENST00000477890 RIMS1Q86UR5 1692 aaKnown RBP19.4■□□□□ 0.7
CPSF7-211ENST00000477890 YEATS2Q9ULM3 1422 aa19.39■□□□□ 0.69
CPSF7-211ENST00000477890 SCAPERQ9BY12 1400 aa19.38■□□□□ 0.69
CPSF7-211ENST00000477890 MYO5CQ9NQX4 1742 aa19.38■□□□□ 0.69
CPSF7-211ENST00000477890 CDK11AQ9UQ88 783 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms