RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 MAGI1Q96QZ7 1491 aaPredicted RBP19.53■□□□□ 0.72
PRPF39-203ENST00000477626 CEP170Q5SW79 1584 aa19.51■□□□□ 0.71
PRPF39-203ENST00000477626 MAP3K1Q13233 1512 aa19.5■□□□□ 0.71
PRPF39-203ENST00000477626 SNAPC4Q5SXM2 1469 aa19.5■□□□□ 0.71
PRPF39-203ENST00000477626 UGGT2Q9NYU1 1516 aa19.48■□□□□ 0.71
PRPF39-203ENST00000477626 IQGAP2Q13576 1575 aa19.46■□□□□ 0.71
PRPF39-203ENST00000477626 GRIN2AQ12879 1464 aa19.46■□□□□ 0.71
PRPF39-203ENST00000477626 PCF11O94913 1555 aaKnown RBP19.45■□□□□ 0.7
PRPF39-203ENST00000477626 SYNJ2O15056 1496 aa19.43■□□□□ 0.7
PRPF39-203ENST00000477626 EHMT2Q96KQ7 1210 aa19.42■□□□□ 0.7
PRPF39-203ENST00000477626 NUP160Q12769 1436 aa19.42■□□□□ 0.7
PRPF39-203ENST00000477626 CHD1O14646 1710 aa19.41■□□□□ 0.7
PRPF39-203ENST00000477626 UBTFP17480 764 aaKnown RBP19.4■□□□□ 0.7
PRPF39-203ENST00000477626 SHROOM2Q13796 1616 aa19.4■□□□□ 0.7
PRPF39-203ENST00000477626 TIAM1Q13009 1591 aa19.38■□□□□ 0.69
PRPF39-203ENST00000477626 DISP1Q96F81 1524 aa19.38■□□□□ 0.69
PRPF39-203ENST00000477626 KIAA0556O60303 1618 aa19.36■□□□□ 0.69
PRPF39-203ENST00000477626 KIAA0586Q9BVV6 1533 aa19.34■□□□□ 0.69
PRPF39-203ENST00000477626 FYCO1Q9BQS8 1478 aa19.33■□□□□ 0.69
PRPF39-203ENST00000477626 CASKIN1Q8WXD9 1431 aa19.29■□□□□ 0.68
PRPF39-203ENST00000477626 CLASP1Q7Z460 1538 aa19.26■□□□□ 0.67
PRPF39-203ENST00000477626 TRIM26Q12899 539 aaPredicted RBP19.26■□□□□ 0.67
PRPF39-203ENST00000477626 FHOD3Q2V2M9 1422 aa19.25■□□□□ 0.67
PRPF39-203ENST00000477626 ARHGEF11O15085 1522 aa19.24■□□□□ 0.67
PRPF39-203ENST00000477626 MAGI3Q5TCQ9 1506 aa19.2■□□□□ 0.66
PRPF39-203ENST00000477626 LRRC9Q6ZRR7 1453 aa19.18■□□□□ 0.66
PRPF39-203ENST00000477626 RRBP1Q9P2E9 1410 aaKnown RBP19.16■□□□□ 0.66
PRPF39-203ENST00000477626 FMN1Q68DA7 1419 aa19.16■□□□□ 0.66
PRPF39-203ENST00000477626 HECW1Q76N89 1606 aa19.15■□□□□ 0.66
PRPF39-203ENST00000477626 ABCA8O94911 1581 aa19.13■□□□□ 0.65
PRPF39-203ENST00000477626 RAPGEF6Q8TEU7 1601 aa19.13■□□□□ 0.65
PRPF39-203ENST00000477626 ADCY10Q96PN6 1610 aa19.1■□□□□ 0.65
PRPF39-203ENST00000477626 PCGF6Q9BYE7 350 aa19.1■□□□□ 0.65
PRPF39-203ENST00000477626 KANK4Q5T7N3 995 aaPredicted RBP19.09■□□□□ 0.65
PRPF39-203ENST00000477626 NUP153P49790 1475 aaKnown RBP19.07■□□□□ 0.64
PRPF39-203ENST00000477626 CCDC18Q5T9S5 1454 aa19.04■□□□□ 0.64
PRPF39-203ENST00000477626 EPRSP07814 1512 aaKnown RBP19.04■□□□□ 0.64
PRPF39-203ENST00000477626 ERCC6L2Q5T890 1561 aa19.03■□□□□ 0.64
PRPF39-203ENST00000477626 EHBP1L1Q8N3D4 1523 aa19.03■□□□□ 0.64
PRPF39-203ENST00000477626 SUPT6HQ7KZ85 1726 aaKnown RBP19.01■□□□□ 0.63
PRPF39-203ENST00000477626 PPARGC1BQ86YN6 1023 aaKnown RBP18.97■□□□□ 0.63
PRPF39-203ENST00000477626 CDK13Q14004 1512 aaKnown RBP18.96■□□□□ 0.63
PRPF39-203ENST00000477626 PHLDB1Q86UU1 1377 aa18.96■□□□□ 0.63
PRPF39-203ENST00000477626 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.94■□□□□ 0.62
PRPF39-203ENST00000477626 TCOF1Q13428 1488 aaKnown RBP18.91■□□□□ 0.62
PRPF39-203ENST00000477626 PLB1Q6P1J6 1458 aa18.91■□□□□ 0.62
PRPF39-203ENST00000477626 RANGAP1P46060 587 aaPredicted RBP18.9■□□□□ 0.62
PRPF39-203ENST00000477626 CHMP7Q8WUX9 453 aaPredicted RBP18.87■□□□□ 0.61
PRPF39-203ENST00000477626 NCOA2Q15596 1464 aa18.87■□□□□ 0.61
PRPF39-203ENST00000477626 KIF14Q15058 1648 aa18.86■□□□□ 0.61
PRPF39-203ENST00000477626 P3H3Q8IVL6 736 aa18.86■□□□□ 0.61
PRPF39-203ENST00000477626 CDC42BPAQ5VT25 1732 aa18.85■□□□□ 0.61
PRPF39-203ENST00000477626 PRG4Q92954 1404 aaPredicted RBP18.84■□□□□ 0.61
PRPF39-203ENST00000477626 HRCP23327 699 aa18.84■□□□□ 0.61
PRPF39-203ENST00000477626 JPH4Q96JJ6 628 aa18.83■□□□□ 0.61
PRPF39-203ENST00000477626 PTPN23Q9H3S7 1636 aa18.83■□□□□ 0.61
PRPF39-203ENST00000477626 UHRF1BP1LA0JNW5 1464 aa18.83■□□□□ 0.61
PRPF39-203ENST00000477626 CROCC2H7BZ55 1655 aa18.82■□□□□ 0.6
PRPF39-203ENST00000477626 CCNB3Q8WWL7 1395 aa18.81■□□□□ 0.6
PRPF39-203ENST00000477626 ABCC10Q5T3U5 1492 aa18.81■□□□□ 0.6
PRPF39-203ENST00000477626 CARMIL2Q6F5E8 1435 aa18.81■□□□□ 0.6
PRPF39-203ENST00000477626 ABCC2Q92887 1545 aa18.8■□□□□ 0.6
PRPF39-203ENST00000477626 ATP10BO94823 1461 aa18.8■□□□□ 0.6
PRPF39-203ENST00000477626 FGD6Q6ZV73 1430 aa18.8■□□□□ 0.6
PRPF39-203ENST00000477626 ITSN2Q9NZM3 1697 aa18.78■□□□□ 0.6
PRPF39-203ENST00000477626 KDM5BQ9UGL1 1544 aa18.78■□□□□ 0.6
PRPF39-203ENST00000477626 GCC2Q8IWJ2 1684 aa18.78■□□□□ 0.6
PRPF39-203ENST00000477626 ZCCHC11Q5TAX3 1644 aaKnown RBP18.78■□□□□ 0.6
PRPF39-203ENST00000477626 MYOM3Q5VTT5 1437 aa18.78■□□□□ 0.6
PRPF39-203ENST00000477626 CDC42BPBQ9Y5S2 1711 aa18.75■□□□□ 0.59
PRPF39-203ENST00000477626 PTPRKQ15262 1439 aa18.74■□□□□ 0.59
PRPF39-203ENST00000477626 DNMT1P26358 1616 aaKnown RBP18.73■□□□□ 0.59
PRPF39-203ENST00000477626 PREX2Q70Z35 1606 aa18.72■□□□□ 0.59
PRPF39-203ENST00000477626 TROQ12816 1431 aaPredicted RBP18.72■□□□□ 0.59
PRPF39-203ENST00000477626 MIA2Q96PC5 1412 aa18.71■□□□□ 0.59
PRPF39-203ENST00000477626 UACAQ9BZF9 1416 aa18.68■□□□□ 0.58
PRPF39-203ENST00000477626 TTC37Q6PGP7 1564 aa18.67■□□□□ 0.58
PRPF39-203ENST00000477626 ADGBQ8N7X0 1667 aa18.66■□□□□ 0.58
PRPF39-203ENST00000477626 GPATCH8Q9UKJ3 1502 aaKnown RBP18.66■□□□□ 0.58
PRPF39-203ENST00000477626 AKNAQ7Z591 1439 aa18.64■□□□□ 0.57
PRPF39-203ENST00000477626 PTPRGP23470 1445 aa18.63■□□□□ 0.57
PRPF39-203ENST00000477626 MAPKBP1O60336 1514 aa18.63■□□□□ 0.57
PRPF39-203ENST00000477626 APLP2Q06481 763 aa18.63■□□□□ 0.57
PRPF39-203ENST00000477626 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.63■□□□□ 0.57
PRPF39-203ENST00000477626 MTUS2Q5JR59 1369 aa18.62■□□□□ 0.57
PRPF39-203ENST00000477626 KDM6BO15054 1643 aa18.62■□□□□ 0.57
PRPF39-203ENST00000477626 TTBK1Q5TCY1 1321 aaPredicted RBP18.61■□□□□ 0.57
PRPF39-203ENST00000477626 FBLN2P98095 1184 aa18.61■□□□□ 0.57
PRPF39-203ENST00000477626 MYO5CQ9NQX4 1742 aa18.6■□□□□ 0.57
PRPF39-203ENST00000477626 SAMD9LQ8IVG5 1584 aa18.6■□□□□ 0.57
PRPF39-203ENST00000477626 ARHGEF5Q12774 1597 aa18.59■□□□□ 0.57
PRPF39-203ENST00000477626 HFM1A2PYH4 1435 aa18.58■□□□□ 0.56
PRPF39-203ENST00000477626 DENND4BO75064 1496 aaPredicted RBP18.57■□□□□ 0.56
PRPF39-203ENST00000477626 DHX57Q6P158 1386 aaKnown RBP18.56■□□□□ 0.56
PRPF39-203ENST00000477626 ARAP3Q8WWN8 1544 aa18.55■□□□□ 0.56
PRPF39-203ENST00000477626 ABCA9Q8IUA7 1624 aa18.55■□□□□ 0.56
PRPF39-203ENST00000477626 CAMSAP2Q08AD1 1489 aa18.55■□□□□ 0.56
PRPF39-203ENST00000477626 ADGRL2O95490 1459 aa18.55■□□□□ 0.56
PRPF39-203ENST00000477626 MAST1Q9Y2H9 1570 aa18.54■□□□□ 0.56
PRPF39-203ENST00000477626 NAIPQ13075 1403 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms