RNA–Protein interactions for RNA: ENST00000477556.1

PABPC4-212, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-212ENST00000477556 IGF1RP08069 1367 aa22.92■■□□□ 1.26
PABPC4-212ENST00000477556 CUL7Q14999 1698 aa22.87■■□□□ 1.25
PABPC4-212ENST00000477556 KIAA0586Q9BVV6 1533 aa22.87■■□□□ 1.25
PABPC4-212ENST00000477556 NPM1P06748 294 aaKnown RBP eCLIP22.84■■□□□ 1.25
PABPC4-212ENST00000477556 CARMIL1Q5VZK9 1371 aa22.79■■□□□ 1.24
PABPC4-212ENST00000477556 AEBP2Q6ZN18 517 aaPredicted RBP22.79■■□□□ 1.24
PABPC4-212ENST00000477556 KIF13AQ9H1H9 1805 aa22.76■■□□□ 1.23
PABPC4-212ENST00000477556 FAM69CQ0P6D2 419 aa22.73■■□□□ 1.23
PABPC4-212ENST00000477556 MAPKBP1O60336 1514 aa22.72■■□□□ 1.23
PABPC4-212ENST00000477556 ADCY10Q96PN6 1610 aa22.72■■□□□ 1.23
PABPC4-212ENST00000477556 ABCC10Q5T3U5 1492 aa22.72■■□□□ 1.23
PABPC4-212ENST00000477556 PTPRGP23470 1445 aa22.68■■□□□ 1.22
PABPC4-212ENST00000477556 CARMIL2Q6F5E8 1435 aa22.67■■□□□ 1.22
PABPC4-212ENST00000477556 DIP2BQ9P265 1576 aa22.64■■□□□ 1.22
PABPC4-212ENST00000477556 TNIKQ9UKE5 1360 aa22.63■■□□□ 1.21
PABPC4-212ENST00000477556 IQGAP2Q13576 1575 aa22.63■■□□□ 1.21
PABPC4-212ENST00000477556 TTBK1Q5TCY1 1321 aaPredicted RBP22.63■■□□□ 1.21
PABPC4-212ENST00000477556 RAPGEF2Q9Y4G8 1499 aa22.57■■□□□ 1.2
PABPC4-212ENST00000477556 ABCC2Q92887 1545 aa22.54■■□□□ 1.2
PABPC4-212ENST00000477556 DISP1Q96F81 1524 aa22.52■■□□□ 1.19
PABPC4-212ENST00000477556 UHRF1BP1LA0JNW5 1464 aa22.5■■□□□ 1.19
PABPC4-212ENST00000477556 UACAQ9BZF9 1416 aa22.49■■□□□ 1.19
PABPC4-212ENST00000477556 UGGT2Q9NYU1 1516 aa22.49■■□□□ 1.19
PABPC4-212ENST00000477556 PLB1Q6P1J6 1458 aa22.47■■□□□ 1.19
PABPC4-212ENST00000477556 TSPOAP1O95153 1857 aa22.47■■□□□ 1.19
PABPC4-212ENST00000477556 KDM6BO15054 1643 aa22.47■■□□□ 1.19
PABPC4-212ENST00000477556 ASXL2Q76L83 1435 aa22.47■■□□□ 1.19
PABPC4-212ENST00000477556 KIAA0556O60303 1618 aa22.42■■□□□ 1.18
PABPC4-212ENST00000477556 GLI2P10070 1586 aa22.4■■□□□ 1.18
PABPC4-212ENST00000477556 KDM5BQ9UGL1 1544 aa22.39■■□□□ 1.17
PABPC4-212ENST00000477556 CTTNBP2Q8WZ74 1663 aa22.35■■□□□ 1.17
PABPC4-212ENST00000477556 GOLGA3Q08378 1498 aa22.34■■□□□ 1.17
PABPC4-212ENST00000477556 EPRSP07814 1512 aaKnown RBP22.32■■□□□ 1.16
PABPC4-212ENST00000477556 ZCCHC11Q5TAX3 1644 aaKnown RBP22.32■■□□□ 1.16
PABPC4-212ENST00000477556 PRXQ9BXM0 1461 aa22.31■■□□□ 1.16
PABPC4-212ENST00000477556 PPRC1Q5VV67 1664 aaKnown RBP22.3■■□□□ 1.16
PABPC4-212ENST00000477556 KDM4FA0A1W2PPD8 638 aa22.26■■□□□ 1.15
PABPC4-212ENST00000477556 TEX14Q8IWB6 1497 aa22.26■■□□□ 1.15
PABPC4-212ENST00000477556 MAP3K4Q9Y6R4 1608 aa22.25■■□□□ 1.15
PABPC4-212ENST00000477556 WDR7Q9Y4E6 1490 aa22.25■■□□□ 1.15
PABPC4-212ENST00000477556 FAM9AQ8IZU1 332 aaPredicted RBP22.22■■□□□ 1.15
PABPC4-212ENST00000477556 ABCA8O94911 1581 aa22.21■■□□□ 1.15
PABPC4-212ENST00000477556 COL17A1Q9UMD9 1497 aaPredicted RBP22.18■■□□□ 1.14
PABPC4-212ENST00000477556 CSRNP3Q8WYN3 585 aa22.17■■□□□ 1.14
PABPC4-212ENST00000477556 KCNH8Q96L42 1107 aa22.15■■□□□ 1.14
PABPC4-212ENST00000477556 P3H3Q8IVL6 736 aa22.13■■□□□ 1.13
PABPC4-212ENST00000477556 CD109Q6YHK3 1445 aa22.13■■□□□ 1.13
PABPC4-212ENST00000477556 MAGI3Q5TCQ9 1506 aa22.11■■□□□ 1.13
PABPC4-212ENST00000477556 CFAP43Q8NDM7 1665 aa22.1■■□□□ 1.13
PABPC4-212ENST00000477556 EEA1Q15075 1411 aa22.08■■□□□ 1.13
PABPC4-212ENST00000477556 ADGRL1O94910 1474 aa22.08■■□□□ 1.12
PABPC4-212ENST00000477556 ARID3CA6NKF2 412 aa22.06■■□□□ 1.12
PABPC4-212ENST00000477556 ATP10BO94823 1461 aa22.04■■□□□ 1.12
PABPC4-212ENST00000477556 SAMD9Q5K651 1589 aa22.04■■□□□ 1.12
PABPC4-212ENST00000477556 RAPGEF6Q8TEU7 1601 aa21.97■■□□□ 1.11
PABPC4-212ENST00000477556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.96■■□□□ 1.11
PABPC4-212ENST00000477556 RANGAP1P46060 587 aaPredicted RBP21.96■■□□□ 1.11
PABPC4-212ENST00000477556 HNRNPUL2Q1KMD3 747 aaKnown RBP21.96■■□□□ 1.11
PABPC4-212ENST00000477556 ABCA9Q8IUA7 1624 aa21.92■■□□□ 1.1
PABPC4-212ENST00000477556 ARAP3Q8WWN8 1544 aa21.92■■□□□ 1.1
PABPC4-212ENST00000477556 PHLDB1Q86UU1 1377 aa21.92■■□□□ 1.1
PABPC4-212ENST00000477556 FHOD3Q2V2M9 1422 aa21.91■■□□□ 1.1
PABPC4-212ENST00000477556 NUP153P49790 1475 aaKnown RBP21.89■■□□□ 1.09
PABPC4-212ENST00000477556 KIF21BO75037 1637 aa21.86■■□□□ 1.09
PABPC4-212ENST00000477556 NEO1Q92859 1461 aa21.85■■□□□ 1.09
PABPC4-212ENST00000477556 EFCAB5A4FU69 1503 aa21.85■■□□□ 1.09
PABPC4-212ENST00000477556 PLEKHD1A6NEE1 506 aa21.84■■□□□ 1.09
PABPC4-212ENST00000477556 RAPGEF3O95398 923 aa21.8■■□□□ 1.08
PABPC4-212ENST00000477556 ILDR1Q86SU0 546 aaPredicted RBP21.78■■□□□ 1.08
PABPC4-212ENST00000477556 HECW2Q9P2P5 1572 aa21.77■■□□□ 1.08
PABPC4-212ENST00000477556 UBTFP17480 764 aaKnown RBP21.76■■□□□ 1.07
PABPC4-212ENST00000477556 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
PABPC4-212ENST00000477556 FRMPD1Q5SYB0 1578 aa21.7■■□□□ 1.06
PABPC4-212ENST00000477556 CHIC1Q5VXU3 224 aa21.7■■□□□ 1.06
PABPC4-212ENST00000477556 AKNAQ7Z591 1439 aa21.7■■□□□ 1.06
PABPC4-212ENST00000477556 DENND4BO75064 1496 aaPredicted RBP21.7■■□□□ 1.06
PABPC4-212ENST00000477556 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.7■■□□□ 1.06
PABPC4-212ENST00000477556 FANCAO15360 1455 aa21.69■■□□□ 1.06
PABPC4-212ENST00000477556 CFAP74Q9C0B2 1584 aa21.69■■□□□ 1.06
PABPC4-212ENST00000477556 ARID4BQ4LE39 1312 aaPredicted RBP21.68■■□□□ 1.06
PABPC4-212ENST00000477556 CDK13Q14004 1512 aaKnown RBP21.68■■□□□ 1.06
PABPC4-212ENST00000477556 FMN1Q68DA7 1419 aa21.67■■□□□ 1.06
PABPC4-212ENST00000477556 ATP1B4Q9UN42 357 aaPredicted RBP21.66■■□□□ 1.06
PABPC4-212ENST00000477556 TTC37Q6PGP7 1564 aa21.65■■□□□ 1.06
PABPC4-212ENST00000477556 ADAMTSL3P82987 1691 aa21.65■■□□□ 1.06
PABPC4-212ENST00000477556 PTPRMP28827 1452 aa21.64■■□□□ 1.05
PABPC4-212ENST00000477556 ARHGEF40Q8TER5 1519 aa21.63■■□□□ 1.05
PABPC4-212ENST00000477556 ARHGAP35Q9NRY4 1499 aa21.63■■□□□ 1.05
PABPC4-212ENST00000477556 CDK11AQ9UQ88 783 aaPredicted RBP21.62■■□□□ 1.05
PABPC4-212ENST00000477556 RICTORQ6R327 1708 aa21.62■■□□□ 1.05
PABPC4-212ENST00000477556 HECW1Q76N89 1606 aa21.62■■□□□ 1.05
PABPC4-212ENST00000477556 BCORL1Q5H9F3 1711 aa21.61■■□□□ 1.05
PABPC4-212ENST00000477556 PLCH2O75038 1416 aa21.59■■□□□ 1.05
PABPC4-212ENST00000477556 ZMYM4Q5VZL5 1548 aa21.57■■□□□ 1.04
PABPC4-212ENST00000477556 MADDQ8WXG6 1647 aa21.56■■□□□ 1.04
PABPC4-212ENST00000477556 MAGI2Q86UL8 1455 aa21.55■■□□□ 1.04
PABPC4-212ENST00000477556 ZFYVE16Q7Z3T8 1539 aa21.55■■□□□ 1.04
PABPC4-212ENST00000477556 POGZQ7Z3K3 1410 aa21.55■■□□□ 1.04
PABPC4-212ENST00000477556 SCAPERQ9BY12 1400 aa21.55■■□□□ 1.04
PABPC4-212ENST00000477556 EFCAB2Q5VUJ9 269 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms