RNA–Protein interactions for RNA: ENST00000477442.6

SRSF3-203, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 5

Gene SRSF3, Length 1,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-203ENST00000477442 KIF27Q86VH2 1401 aa22.92■■□□□ 1.26
SRSF3-203ENST00000477442 CUL7Q14999 1698 aa22.86■■□□□ 1.25
SRSF3-203ENST00000477442 KIAA0586Q9BVV6 1533 aa22.83■■□□□ 1.25
SRSF3-203ENST00000477442 CARMIL1Q5VZK9 1371 aa22.79■■□□□ 1.24
SRSF3-203ENST00000477442 KIF13AQ9H1H9 1805 aa22.76■■□□□ 1.23
SRSF3-203ENST00000477442 ADCY10Q96PN6 1610 aa22.75■■□□□ 1.23
SRSF3-203ENST00000477442 TTBK1Q5TCY1 1321 aaPredicted RBP22.69■■□□□ 1.22
SRSF3-203ENST00000477442 NPM1P06748 294 aaKnown RBP eCLIP22.68■■□□□ 1.22
SRSF3-203ENST00000477442 FAM69CQ0P6D2 419 aa22.66■■□□□ 1.22
SRSF3-203ENST00000477442 MAPKBP1O60336 1514 aa22.66■■□□□ 1.22
SRSF3-203ENST00000477442 ABCC10Q5T3U5 1492 aa22.65■■□□□ 1.22
SRSF3-203ENST00000477442 PTPRGP23470 1445 aa22.64■■□□□ 1.21
SRSF3-203ENST00000477442 IQGAP2Q13576 1575 aa22.63■■□□□ 1.21
SRSF3-203ENST00000477442 DIP2BQ9P265 1576 aa22.62■■□□□ 1.21
SRSF3-203ENST00000477442 TNIKQ9UKE5 1360 aa22.58■■□□□ 1.21
SRSF3-203ENST00000477442 CARMIL2Q6F5E8 1435 aa22.57■■□□□ 1.2
SRSF3-203ENST00000477442 AEBP2Q6ZN18 517 aaPredicted RBP22.57■■□□□ 1.2
SRSF3-203ENST00000477442 RAPGEF2Q9Y4G8 1499 aa22.57■■□□□ 1.2
SRSF3-203ENST00000477442 DISP1Q96F81 1524 aa22.55■■□□□ 1.2
SRSF3-203ENST00000477442 ABCC2Q92887 1545 aa22.5■■□□□ 1.19
SRSF3-203ENST00000477442 UGGT2Q9NYU1 1516 aa22.48■■□□□ 1.19
SRSF3-203ENST00000477442 TSPOAP1O95153 1857 aa22.48■■□□□ 1.19
SRSF3-203ENST00000477442 UACAQ9BZF9 1416 aa22.46■■□□□ 1.19
SRSF3-203ENST00000477442 ASXL2Q76L83 1435 aa22.45■■□□□ 1.18
SRSF3-203ENST00000477442 UHRF1BP1LA0JNW5 1464 aa22.44■■□□□ 1.18
SRSF3-203ENST00000477442 KIAA0556O60303 1618 aa22.43■■□□□ 1.18
SRSF3-203ENST00000477442 KDM6BO15054 1643 aa22.4■■□□□ 1.18
SRSF3-203ENST00000477442 CTTNBP2Q8WZ74 1663 aa22.39■■□□□ 1.17
SRSF3-203ENST00000477442 PLB1Q6P1J6 1458 aa22.38■■□□□ 1.17
SRSF3-203ENST00000477442 PRXQ9BXM0 1461 aa22.36■■□□□ 1.17
SRSF3-203ENST00000477442 KDM5BQ9UGL1 1544 aa22.36■■□□□ 1.17
SRSF3-203ENST00000477442 ZCCHC11Q5TAX3 1644 aaKnown RBP22.34■■□□□ 1.17
SRSF3-203ENST00000477442 PPRC1Q5VV67 1664 aaKnown RBP22.33■■□□□ 1.17
SRSF3-203ENST00000477442 GLI2P10070 1586 aa22.33■■□□□ 1.16
SRSF3-203ENST00000477442 EPRSP07814 1512 aaKnown RBP22.3■■□□□ 1.16
SRSF3-203ENST00000477442 GOLGA3Q08378 1498 aa22.26■■□□□ 1.15
SRSF3-203ENST00000477442 MAP3K4Q9Y6R4 1608 aa22.24■■□□□ 1.15
SRSF3-203ENST00000477442 ABCA8O94911 1581 aa22.23■■□□□ 1.15
SRSF3-203ENST00000477442 COL17A1Q9UMD9 1497 aaPredicted RBP22.22■■□□□ 1.15
SRSF3-203ENST00000477442 KDM4FA0A1W2PPD8 638 aa22.21■■□□□ 1.15
SRSF3-203ENST00000477442 P3H3Q8IVL6 736 aa22.21■■□□□ 1.15
SRSF3-203ENST00000477442 WDR7Q9Y4E6 1490 aa22.21■■□□□ 1.15
SRSF3-203ENST00000477442 CSRNP3Q8WYN3 585 aa22.2■■□□□ 1.14
SRSF3-203ENST00000477442 ARID3CA6NKF2 412 aa22.16■■□□□ 1.14
SRSF3-203ENST00000477442 KCNH8Q96L42 1107 aa22.14■■□□□ 1.13
SRSF3-203ENST00000477442 TEX14Q8IWB6 1497 aa22.12■■□□□ 1.13
SRSF3-203ENST00000477442 FAM9AQ8IZU1 332 aaPredicted RBP22.11■■□□□ 1.13
SRSF3-203ENST00000477442 SAMD9Q5K651 1589 aa22.08■■□□□ 1.12
SRSF3-203ENST00000477442 CD109Q6YHK3 1445 aa22.07■■□□□ 1.12
SRSF3-203ENST00000477442 RANGAP1P46060 587 aaPredicted RBP22.07■■□□□ 1.12
SRSF3-203ENST00000477442 ATP10BO94823 1461 aa22.06■■□□□ 1.12
SRSF3-203ENST00000477442 CFAP43Q8NDM7 1665 aa22.04■■□□□ 1.12
SRSF3-203ENST00000477442 EEA1Q15075 1411 aa22.04■■□□□ 1.12
SRSF3-203ENST00000477442 MAGI3Q5TCQ9 1506 aa22.03■■□□□ 1.12
SRSF3-203ENST00000477442 ADGRL1O94910 1474 aa22.03■■□□□ 1.12
SRSF3-203ENST00000477442 RAPGEF6Q8TEU7 1601 aa21.98■■□□□ 1.11
SRSF3-203ENST00000477442 FHOD3Q2V2M9 1422 aa21.98■■□□□ 1.11
SRSF3-203ENST00000477442 NUP153P49790 1475 aaKnown RBP21.93■■□□□ 1.1
SRSF3-203ENST00000477442 EHMT2Q96KQ7 1210 aa21.93■■□□□ 1.1
SRSF3-203ENST00000477442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.92■■□□□ 1.1
SRSF3-203ENST00000477442 HNRNPUL2Q1KMD3 747 aaKnown RBP21.92■■□□□ 1.1
SRSF3-203ENST00000477442 KIF21BO75037 1637 aa21.91■■□□□ 1.1
SRSF3-203ENST00000477442 ABCA9Q8IUA7 1624 aa21.91■■□□□ 1.1
SRSF3-203ENST00000477442 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
SRSF3-203ENST00000477442 ARAP3Q8WWN8 1544 aa21.85■■□□□ 1.09
SRSF3-203ENST00000477442 EFCAB5A4FU69 1503 aa21.82■■□□□ 1.08
SRSF3-203ENST00000477442 RAPGEF3O95398 923 aa21.81■■□□□ 1.08
SRSF3-203ENST00000477442 UBTFP17480 764 aaKnown RBP21.78■■□□□ 1.08
SRSF3-203ENST00000477442 PLEKHD1A6NEE1 506 aa21.77■■□□□ 1.08
SRSF3-203ENST00000477442 NEO1Q92859 1461 aa21.77■■□□□ 1.07
SRSF3-203ENST00000477442 CDK13Q14004 1512 aaKnown RBP21.76■■□□□ 1.07
SRSF3-203ENST00000477442 PHLDB1Q86UU1 1377 aa21.75■■□□□ 1.07
SRSF3-203ENST00000477442 FRMPD1Q5SYB0 1578 aa21.75■■□□□ 1.07
SRSF3-203ENST00000477442 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.72■■□□□ 1.079e-8■□□□□ 9.5
SRSF3-203ENST00000477442 TTC37Q6PGP7 1564 aa21.71■■□□□ 1.07
SRSF3-203ENST00000477442 HECW2Q9P2P5 1572 aa21.71■■□□□ 1.07
SRSF3-203ENST00000477442 ARHGAP35Q9NRY4 1499 aa21.71■■□□□ 1.07
SRSF3-203ENST00000477442 ATP1B4Q9UN42 357 aaPredicted RBP21.69■■□□□ 1.06
SRSF3-203ENST00000477442 FANCAO15360 1455 aa21.66■■□□□ 1.06
SRSF3-203ENST00000477442 AKNAQ7Z591 1439 aa21.66■■□□□ 1.06
SRSF3-203ENST00000477442 DENND4BO75064 1496 aaPredicted RBP21.64■■□□□ 1.06
SRSF3-203ENST00000477442 RICTORQ6R327 1708 aa21.63■■□□□ 1.05
SRSF3-203ENST00000477442 FMN1Q68DA7 1419 aa21.63■■□□□ 1.05
SRSF3-203ENST00000477442 ADAMTSL3P82987 1691 aa21.62■■□□□ 1.05
SRSF3-203ENST00000477442 HECW1Q76N89 1606 aa21.62■■□□□ 1.05
SRSF3-203ENST00000477442 ARID4BQ4LE39 1312 aaPredicted RBP21.59■■□□□ 1.05
SRSF3-203ENST00000477442 CFAP74Q9C0B2 1584 aa21.59■■□□□ 1.05
SRSF3-203ENST00000477442 ARHGEF40Q8TER5 1519 aa21.59■■□□□ 1.05
SRSF3-203ENST00000477442 PTPRMP28827 1452 aa21.58■■□□□ 1.04
SRSF3-203ENST00000477442 BCORL1Q5H9F3 1711 aa21.58■■□□□ 1.04
SRSF3-203ENST00000477442 PLCH2O75038 1416 aa21.56■■□□□ 1.04
SRSF3-203ENST00000477442 YEATS2Q9ULM3 1422 aa21.55■■□□□ 1.04
SRSF3-203ENST00000477442 KIF14Q15058 1648 aa21.55■■□□□ 1.04
SRSF3-203ENST00000477442 MADDQ8WXG6 1647 aa21.55■■□□□ 1.04
SRSF3-203ENST00000477442 LRRIQ1Q96JM4 1722 aa21.55■■□□□ 1.04
SRSF3-203ENST00000477442 ZMYM4Q5VZL5 1548 aa21.53■■□□□ 1.04
SRSF3-203ENST00000477442 SCAPERQ9BY12 1400 aa21.53■■□□□ 1.04
SRSF3-203ENST00000477442 SIGLEC1Q9BZZ2 1709 aa21.52■■□□□ 1.04
SRSF3-203ENST00000477442 ILDR1Q86SU0 546 aaPredicted RBP21.51■■□□□ 1.03
SRSF3-203ENST00000477442 ZFYVE16Q7Z3T8 1539 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms