RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 GAPVD1Q14C86 1478 aa20.09■□□□□ 0.81
HDAC7-221ENST00000477203 ERCC6Q03468 1493 aa20.03■□□□□ 0.8
HDAC7-221ENST00000477203 FBLN2P98095 1184 aa20.02■□□□□ 0.8
HDAC7-221ENST00000477203 FAM50AQ14320 339 aaKnown RBP20.02■□□□□ 0.79
HDAC7-221ENST00000477203 MYT1Q01538 1121 aa19.98■□□□□ 0.79
HDAC7-221ENST00000477203 ZNF608Q9ULD9 1512 aaPredicted RBP19.97■□□□□ 0.79
HDAC7-221ENST00000477203 MRC2Q9UBG0 1479 aa19.95■□□□□ 0.78
HDAC7-221ENST00000477203 WDR97A6NE52 1622 aa19.92■□□□□ 0.78
HDAC7-221ENST00000477203 ABCA5Q8WWZ7 1642 aa19.91■□□□□ 0.78
HDAC7-221ENST00000477203 CUL7Q14999 1698 aa19.9■□□□□ 0.78
HDAC7-221ENST00000477203 TARBP1Q13395 1621 aaKnown RBP19.9■□□□□ 0.78
HDAC7-221ENST00000477203 PCF11O94913 1555 aaKnown RBP19.89■□□□□ 0.78
HDAC7-221ENST00000477203 CCNB3Q8WWL7 1395 aa19.88■□□□□ 0.77
HDAC7-221ENST00000477203 FHAD1B1AJZ9 1412 aa19.86■□□□□ 0.77
HDAC7-221ENST00000477203 PHLDB1Q86UU1 1377 aa19.85■□□□□ 0.77
HDAC7-221ENST00000477203 CTTNBP2Q8WZ74 1663 aa19.85■□□□□ 0.77
HDAC7-221ENST00000477203 TIAM1Q13009 1591 aa19.84■□□□□ 0.77
HDAC7-221ENST00000477203 LRRC9Q6ZRR7 1453 aa19.82■□□□□ 0.76
HDAC7-221ENST00000477203 CHMP7Q8WUX9 453 aaPredicted RBP19.8■□□□□ 0.76
HDAC7-221ENST00000477203 MTUS2Q5JR59 1369 aa19.78■□□□□ 0.76
HDAC7-221ENST00000477203 PBRM1Q86U86 1689 aa19.78■□□□□ 0.76
HDAC7-221ENST00000477203 RRBP1Q9P2E9 1410 aaKnown RBP19.76■□□□□ 0.75
HDAC7-221ENST00000477203 GRIN2BQ13224 1484 aa19.76■□□□□ 0.75
HDAC7-221ENST00000477203 SNAPC4Q5SXM2 1469 aa19.74■□□□□ 0.75
HDAC7-221ENST00000477203 DIEXFQ68CQ4 756 aaKnown RBP19.74■□□□□ 0.75
HDAC7-221ENST00000477203 FMN1Q68DA7 1419 aa19.73■□□□□ 0.75
HDAC7-221ENST00000477203 IFT140Q96RY7 1462 aa19.73■□□□□ 0.75
HDAC7-221ENST00000477203 CASKIN1Q8WXD9 1431 aa19.72■□□□□ 0.75
HDAC7-221ENST00000477203 EFCAB5A4FU69 1503 aa19.72■□□□□ 0.75
HDAC7-221ENST00000477203 DHX57Q6P158 1386 aaKnown RBP19.7■□□□□ 0.74
HDAC7-221ENST00000477203 WDR62O43379 1518 aa19.7■□□□□ 0.74
HDAC7-221ENST00000477203 FYCO1Q9BQS8 1478 aa19.69■□□□□ 0.74
HDAC7-221ENST00000477203 ADAMTS12P58397 1594 aa19.68■□□□□ 0.74
HDAC7-221ENST00000477203 NEUROD1Q13562 356 aa19.68■□□□□ 0.74
HDAC7-221ENST00000477203 RAB3GAP2Q9H2M9 1393 aa19.68■□□□□ 0.74
HDAC7-221ENST00000477203 CHIC2Q9UKJ5 165 aa19.67■□□□□ 0.74
HDAC7-221ENST00000477203 EIF4G3O43432 1585 aaKnown RBP19.66■□□□□ 0.74
HDAC7-221ENST00000477203 ZNF316A6NFI3 1004 aaPredicted RBP19.65■□□□□ 0.74
HDAC7-221ENST00000477203 IQGAP2Q13576 1575 aa19.64■□□□□ 0.73
HDAC7-221ENST00000477203 GTF3C3Q9Y5Q9 886 aa19.62■□□□□ 0.73
HDAC7-221ENST00000477203 CFAP43Q8NDM7 1665 aa19.62■□□□□ 0.73
HDAC7-221ENST00000477203 SAMD9Q5K651 1589 aa19.61■□□□□ 0.73
HDAC7-221ENST00000477203 SIN3AQ96ST3 1273 aa19.6■□□□□ 0.73
HDAC7-221ENST00000477203 LRRIQ1Q96JM4 1722 aa19.6■□□□□ 0.73
HDAC7-221ENST00000477203 CDK13Q14004 1512 aaKnown RBP19.6■□□□□ 0.73
HDAC7-221ENST00000477203 THOC2Q8NI27 1593 aaKnown RBP19.59■□□□□ 0.73
HDAC7-221ENST00000477203 MAP3K1Q13233 1512 aa19.59■□□□□ 0.73
HDAC7-221ENST00000477203 ACIN1Q9UKV3 1341 aaKnown RBP19.58■□□□□ 0.72
HDAC7-221ENST00000477203 RRP7BPQ9NSQ0 103 aa19.57■□□□□ 0.72
HDAC7-221ENST00000477203 GRIN2AQ12879 1464 aa19.57■□□□□ 0.72
HDAC7-221ENST00000477203 SETD5Q9C0A6 1442 aa19.55■□□□□ 0.72
HDAC7-221ENST00000477203 NCOA2Q15596 1464 aa19.54■□□□□ 0.72
HDAC7-221ENST00000477203 JPH4Q96JJ6 628 aa19.54■□□□□ 0.72
HDAC7-221ENST00000477203 FGD6Q6ZV73 1430 aa19.53■□□□□ 0.72
HDAC7-221ENST00000477203 YTHDC1Q96MU7 727 aaKnown RBP19.53■□□□□ 0.72
HDAC7-221ENST00000477203 MAGI3Q5TCQ9 1506 aa19.52■□□□□ 0.72
HDAC7-221ENST00000477203 ZNF777Q9ULD5 760 aaPredicted RBP19.5■□□□□ 0.71
HDAC7-221ENST00000477203 KIAA0586Q9BVV6 1533 aa19.49■□□□□ 0.71
HDAC7-221ENST00000477203 EPRSP07814 1512 aaKnown RBP19.48■□□□□ 0.71
HDAC7-221ENST00000477203 PTPRKQ15262 1439 aa19.48■□□□□ 0.71
HDAC7-221ENST00000477203 ZNF644Q9H582 1327 aaPredicted RBP19.47■□□□□ 0.71
HDAC7-221ENST00000477203 DISP1Q96F81 1524 aa19.46■□□□□ 0.71
HDAC7-221ENST00000477203 SYNJ2O15056 1496 aa19.45■□□□□ 0.7
HDAC7-221ENST00000477203 TRIM52Q96A61 297 aa19.45■□□□□ 0.7
HDAC7-221ENST00000477203 HIRIP3Q9BW71 556 aaPredicted RBP19.45■□□□□ 0.7
HDAC7-221ENST00000477203 CEP170Q5SW79 1584 aa19.44■□□□□ 0.7
HDAC7-221ENST00000477203 MYOM3Q5VTT5 1437 aa19.44■□□□□ 0.7
HDAC7-221ENST00000477203 PLB1Q6P1J6 1458 aa19.44■□□□□ 0.7
HDAC7-221ENST00000477203 MIER1Q8N108 512 aa19.43■□□□□ 0.7
HDAC7-221ENST00000477203 MAGI1Q96QZ7 1491 aaPredicted RBP19.42■□□□□ 0.7
HDAC7-221ENST00000477203 HECW1Q76N89 1606 aa19.41■□□□□ 0.7
HDAC7-221ENST00000477203 SUPT6HQ7KZ85 1726 aaKnown RBP19.41■□□□□ 0.7
HDAC7-221ENST00000477203 UGGT2Q9NYU1 1516 aa19.41■□□□□ 0.7
HDAC7-221ENST00000477203 KIAA0556O60303 1618 aa19.4■□□□□ 0.7
HDAC7-221ENST00000477203 EHBP1L1Q8N3D4 1523 aa19.38■□□□□ 0.69
HDAC7-221ENST00000477203 PRG4Q92954 1404 aaPredicted RBP19.38■□□□□ 0.69
HDAC7-221ENST00000477203 CLSPNQ9HAW4 1339 aa19.38■□□□□ 0.69
HDAC7-221ENST00000477203 CCDC18Q5T9S5 1454 aa19.37■□□□□ 0.69
HDAC7-221ENST00000477203 MAPKBP1O60336 1514 aa19.37■□□□□ 0.69
HDAC7-221ENST00000477203 FOXD1Q16676 465 aa19.36■□□□□ 0.69
HDAC7-221ENST00000477203 NUP153P49790 1475 aaKnown RBP19.36■□□□□ 0.69
HDAC7-221ENST00000477203 CDK11AQ9UQ88 783 aaPredicted RBP19.36■□□□□ 0.69
HDAC7-221ENST00000477203 PTPN23Q9H3S7 1636 aa19.34■□□□□ 0.69
HDAC7-221ENST00000477203 CARMIL2Q6F5E8 1435 aa19.33■□□□□ 0.68
HDAC7-221ENST00000477203 CFDP1Q9UEE9 299 aaPredicted RBP19.31■□□□□ 0.68
HDAC7-221ENST00000477203 CENPBP07199 599 aaPredicted RBP19.3■□□□□ 0.68
HDAC7-221ENST00000477203 RAPGEF6Q8TEU7 1601 aa19.29■□□□□ 0.68
HDAC7-221ENST00000477203 NAIPQ13075 1403 aa19.27■□□□□ 0.68
HDAC7-221ENST00000477203 NUP160Q12769 1436 aa19.27■□□□□ 0.68
HDAC7-221ENST00000477203 PLEKHD1A6NEE1 506 aa19.27■□□□□ 0.68
HDAC7-221ENST00000477203 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.24■□□□□ 0.673e-16■□□□□ 8.2
HDAC7-221ENST00000477203 KCNH8Q96L42 1107 aa19.24■□□□□ 0.67
HDAC7-221ENST00000477203 HFM1A2PYH4 1435 aa19.23■□□□□ 0.67
HDAC7-221ENST00000477203 PTPRGP23470 1445 aa19.22■□□□□ 0.67
HDAC7-221ENST00000477203 TONSLQ96HA7 1378 aa19.21■□□□□ 0.67
HDAC7-221ENST00000477203 CHD1O14646 1710 aa19.2■□□□□ 0.66
HDAC7-221ENST00000477203 ARHGEF11O15085 1522 aa19.2■□□□□ 0.66
HDAC7-221ENST00000477203 KDM6BO15054 1643 aa19.19■□□□□ 0.66
HDAC7-221ENST00000477203 KIF14Q15058 1648 aa19.19■□□□□ 0.66
HDAC7-221ENST00000477203 DDX10Q13206 875 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms