RNA–Protein interactions for RNA: ENST00000477119.1

APTX-221, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-221ENST00000477119 RUSC2Q8N2Y8 1516 aa23.14■■□□□ 1.3
APTX-221ENST00000477119 CARMIL1Q5VZK9 1371 aa23.12■■□□□ 1.29
APTX-221ENST00000477119 KIAA0586Q9BVV6 1533 aa23.11■■□□□ 1.29
APTX-221ENST00000477119 CUL7Q14999 1698 aa23.1■■□□□ 1.29
APTX-221ENST00000477119 NPM1P06748 294 aaKnown RBP eCLIP23.03■■□□□ 1.28
APTX-221ENST00000477119 TTBK1Q5TCY1 1321 aaPredicted RBP22.95■■□□□ 1.26
APTX-221ENST00000477119 PTPRGP23470 1445 aa22.92■■□□□ 1.26
APTX-221ENST00000477119 CARMIL2Q6F5E8 1435 aa22.91■■□□□ 1.26
APTX-221ENST00000477119 FAM69CQ0P6D2 419 aa22.9■■□□□ 1.26
APTX-221ENST00000477119 RAPGEF2Q9Y4G8 1499 aa22.89■■□□□ 1.25
APTX-221ENST00000477119 ADCY10Q96PN6 1610 aa22.88■■□□□ 1.25
APTX-221ENST00000477119 TNIKQ9UKE5 1360 aa22.87■■□□□ 1.25
APTX-221ENST00000477119 IQGAP2Q13576 1575 aa22.86■■□□□ 1.25
APTX-221ENST00000477119 ABCC10Q5T3U5 1492 aa22.84■■□□□ 1.25
APTX-221ENST00000477119 MAPKBP1O60336 1514 aa22.83■■□□□ 1.25
APTX-221ENST00000477119 KIF13AQ9H1H9 1805 aa22.8■■□□□ 1.24
APTX-221ENST00000477119 DISP1Q96F81 1524 aa22.77■■□□□ 1.24
APTX-221ENST00000477119 UGGT2Q9NYU1 1516 aa22.74■■□□□ 1.23
APTX-221ENST00000477119 DIP2BQ9P265 1576 aa22.73■■□□□ 1.23
APTX-221ENST00000477119 UACAQ9BZF9 1416 aa22.73■■□□□ 1.23
APTX-221ENST00000477119 ABCC2Q92887 1545 aa22.72■■□□□ 1.23
APTX-221ENST00000477119 AEBP2Q6ZN18 517 aaPredicted RBP22.72■■□□□ 1.23
APTX-221ENST00000477119 UHRF1BP1LA0JNW5 1464 aa22.68■■□□□ 1.22
APTX-221ENST00000477119 PRXQ9BXM0 1461 aa22.68■■□□□ 1.22
APTX-221ENST00000477119 ASXL2Q76L83 1435 aa22.65■■□□□ 1.22
APTX-221ENST00000477119 KIAA0556O60303 1618 aa22.64■■□□□ 1.21
APTX-221ENST00000477119 PLB1Q6P1J6 1458 aa22.63■■□□□ 1.21
APTX-221ENST00000477119 CSRNP3Q8WYN3 585 aa22.62■■□□□ 1.21
APTX-221ENST00000477119 GOLGA3Q08378 1498 aa22.6■■□□□ 1.21
APTX-221ENST00000477119 KDM5BQ9UGL1 1544 aa22.58■■□□□ 1.21
APTX-221ENST00000477119 CTTNBP2Q8WZ74 1663 aa22.58■■□□□ 1.2
APTX-221ENST00000477119 TSPOAP1O95153 1857 aa22.54■■□□□ 1.2
APTX-221ENST00000477119 KDM6BO15054 1643 aa22.53■■□□□ 1.2
APTX-221ENST00000477119 GLI2P10070 1586 aa22.52■■□□□ 1.2
APTX-221ENST00000477119 P3H3Q8IVL6 736 aa22.52■■□□□ 1.2
APTX-221ENST00000477119 FAM9AQ8IZU1 332 aaPredicted RBP22.5■■□□□ 1.19
APTX-221ENST00000477119 EPRSP07814 1512 aaKnown RBP22.5■■□□□ 1.19
APTX-221ENST00000477119 ZCCHC11Q5TAX3 1644 aaKnown RBP22.49■■□□□ 1.19
APTX-221ENST00000477119 EEA1Q15075 1411 aa22.47■■□□□ 1.19
APTX-221ENST00000477119 ABCA8O94911 1581 aa22.45■■□□□ 1.18
APTX-221ENST00000477119 KCNH8Q96L42 1107 aa22.44■■□□□ 1.18
APTX-221ENST00000477119 WDR7Q9Y4E6 1490 aa22.43■■□□□ 1.18
APTX-221ENST00000477119 RANGAP1P46060 587 aaPredicted RBP22.42■■□□□ 1.18
APTX-221ENST00000477119 ARID3CA6NKF2 412 aa22.41■■□□□ 1.18
APTX-221ENST00000477119 PPRC1Q5VV67 1664 aaKnown RBP22.39■■□□□ 1.17
APTX-221ENST00000477119 MAP3K4Q9Y6R4 1608 aa22.38■■□□□ 1.17
APTX-221ENST00000477119 TEX14Q8IWB6 1497 aa22.37■■□□□ 1.17
APTX-221ENST00000477119 COL17A1Q9UMD9 1497 aaPredicted RBP22.35■■□□□ 1.17
APTX-221ENST00000477119 KDM4FA0A1W2PPD8 638 aa22.34■■□□□ 1.17
APTX-221ENST00000477119 CD109Q6YHK3 1445 aa22.32■■□□□ 1.16
APTX-221ENST00000477119 ATP10BO94823 1461 aa22.32■■□□□ 1.16
APTX-221ENST00000477119 SAMD9Q5K651 1589 aa22.31■■□□□ 1.16
APTX-221ENST00000477119 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
APTX-221ENST00000477119 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.28■■□□□ 1.16
APTX-221ENST00000477119 HNRNPUL2Q1KMD3 747 aaKnown RBP22.28■■□□□ 1.16
APTX-221ENST00000477119 EHMT2Q96KQ7 1210 aa22.27■■□□□ 1.16
APTX-221ENST00000477119 MAGI3Q5TCQ9 1506 aa22.26■■□□□ 1.15
APTX-221ENST00000477119 FHOD3Q2V2M9 1422 aa22.24■■□□□ 1.15
APTX-221ENST00000477119 KIF21BO75037 1637 aa22.22■■□□□ 1.15
APTX-221ENST00000477119 UBTFP17480 764 aaKnown RBP22.22■■□□□ 1.15
APTX-221ENST00000477119 RAPGEF6Q8TEU7 1601 aa22.21■■□□□ 1.15
APTX-221ENST00000477119 CFAP43Q8NDM7 1665 aa22.21■■□□□ 1.15
APTX-221ENST00000477119 NUP153P49790 1475 aaKnown RBP22.18■■□□□ 1.14
APTX-221ENST00000477119 PLEKHD1A6NEE1 506 aa22.14■■□□□ 1.13
APTX-221ENST00000477119 EFCAB5A4FU69 1503 aa22.14■■□□□ 1.13
APTX-221ENST00000477119 ADGRL1O94910 1474 aa22.14■■□□□ 1.13
APTX-221ENST00000477119 ABCA9Q8IUA7 1624 aa22.1■■□□□ 1.13
APTX-221ENST00000477119 ARAP3Q8WWN8 1544 aa22.08■■□□□ 1.13
APTX-221ENST00000477119 PHLDB1Q86UU1 1377 aa22.08■■□□□ 1.12
APTX-221ENST00000477119 ATP1B4Q9UN42 357 aaPredicted RBP22.07■■□□□ 1.12
APTX-221ENST00000477119 RAPGEF3O95398 923 aa22.05■■□□□ 1.12
APTX-221ENST00000477119 NEO1Q92859 1461 aa22.02■■□□□ 1.12
APTX-221ENST00000477119 ARHGAP35Q9NRY4 1499 aa22■■□□□ 1.11
APTX-221ENST00000477119 FMN1Q68DA7 1419 aa21.99■■□□□ 1.11
APTX-221ENST00000477119 CDK13Q14004 1512 aaKnown RBP21.98■■□□□ 1.11
APTX-221ENST00000477119 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.94■■□□□ 1.1
APTX-221ENST00000477119 CDK11AQ9UQ88 783 aaPredicted RBP21.92■■□□□ 1.1
APTX-221ENST00000477119 FANCAO15360 1455 aa21.91■■□□□ 1.1
APTX-221ENST00000477119 AKNAQ7Z591 1439 aa21.91■■□□□ 1.1
APTX-221ENST00000477119 DENND4BO75064 1496 aaPredicted RBP21.89■■□□□ 1.09
APTX-221ENST00000477119 HECW1Q76N89 1606 aa21.88■■□□□ 1.09
APTX-221ENST00000477119 TTC37Q6PGP7 1564 aa21.88■■□□□ 1.09
APTX-221ENST00000477119 ARID4BQ4LE39 1312 aaPredicted RBP21.86■■□□□ 1.09
APTX-221ENST00000477119 FRMPD1Q5SYB0 1578 aa21.86■■□□□ 1.09
APTX-221ENST00000477119 PLCH2O75038 1416 aa21.85■■□□□ 1.09
APTX-221ENST00000477119 EFCAB2Q5VUJ9 269 aa21.82■■□□□ 1.08
APTX-221ENST00000477119 CFAP74Q9C0B2 1584 aa21.82■■□□□ 1.08
APTX-221ENST00000477119 TROQ12816 1431 aaPredicted RBP21.8■■□□□ 1.08
APTX-221ENST00000477119 SCAPERQ9BY12 1400 aa21.8■■□□□ 1.08
APTX-221ENST00000477119 CLIP1P30622 1438 aa21.78■■□□□ 1.08
APTX-221ENST00000477119 CASKIN1Q8WXD9 1431 aa21.77■■□□□ 1.08
APTX-221ENST00000477119 RICTORQ6R327 1708 aa21.76■■□□□ 1.07
APTX-221ENST00000477119 HECW2Q9P2P5 1572 aa21.76■■□□□ 1.07
APTX-221ENST00000477119 KIF14Q15058 1648 aa21.74■■□□□ 1.07
APTX-221ENST00000477119 ARHGEF40Q8TER5 1519 aa21.74■■□□□ 1.07
APTX-221ENST00000477119 YEATS2Q9ULM3 1422 aa21.73■■□□□ 1.07
APTX-221ENST00000477119 PTPRMP28827 1452 aa21.73■■□□□ 1.07
APTX-221ENST00000477119 ADAMTSL3P82987 1691 aa21.72■■□□□ 1.07
APTX-221ENST00000477119 POGZQ7Z3K3 1410 aa21.72■■□□□ 1.07
APTX-221ENST00000477119 MAGI2Q86UL8 1455 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms