RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 PRG4Q92954 1404 aaPredicted RBP20.59■□□□□ 0.89
BRCA1-213ENST00000476777 SUPT5HO00267 1087 aaKnown RBP20.57■□□□□ 0.88
BRCA1-213ENST00000476777 JPH4Q96JJ6 628 aa20.56■□□□□ 0.88
BRCA1-213ENST00000476777 FAM69CQ0P6D2 419 aa20.5■□□□□ 0.87
BRCA1-213ENST00000476777 ABCC10Q5T3U5 1492 aa20.49■□□□□ 0.87
BRCA1-213ENST00000476777 MAPKBP1O60336 1514 aa20.44■□□□□ 0.86
BRCA1-213ENST00000476777 RUSC2Q8N2Y8 1516 aa20.44■□□□□ 0.86
BRCA1-213ENST00000476777 NPM1P06748 294 aaKnown RBP eCLIP20.44■□□□□ 0.86
BRCA1-213ENST00000476777 DIP2BQ9P265 1576 aa20.4■□□□□ 0.86
BRCA1-213ENST00000476777 ADCY10Q96PN6 1610 aa20.39■□□□□ 0.86
BRCA1-213ENST00000476777 KDM4FA0A1W2PPD8 638 aa20.34■□□□□ 0.85
BRCA1-213ENST00000476777 KIAA0586Q9BVV6 1533 aa20.32■□□□□ 0.84
BRCA1-213ENST00000476777 KDM6BO15054 1643 aa20.31■□□□□ 0.84
BRCA1-213ENST00000476777 IGF1RP08069 1367 aa20.3■□□□□ 0.84
BRCA1-213ENST00000476777 TSPOAP1O95153 1857 aa20.27■□□□□ 0.84
BRCA1-213ENST00000476777 PTPRGP23470 1445 aa20.22■□□□□ 0.83
BRCA1-213ENST00000476777 KIF27Q86VH2 1401 aa20.22■□□□□ 0.83
BRCA1-213ENST00000476777 CUL7Q14999 1698 aa20.19■□□□□ 0.82
BRCA1-213ENST00000476777 TTBK1Q5TCY1 1321 aaPredicted RBP20.16■□□□□ 0.82
BRCA1-213ENST00000476777 ABCC2Q92887 1545 aa20.16■□□□□ 0.82
BRCA1-213ENST00000476777 TNIKQ9UKE5 1360 aa20.15■□□□□ 0.82
BRCA1-213ENST00000476777 ASXL2Q76L83 1435 aa20.13■□□□□ 0.81
BRCA1-213ENST00000476777 CARMIL1Q5VZK9 1371 aa20.13■□□□□ 0.81
BRCA1-213ENST00000476777 PLB1Q6P1J6 1458 aa20.11■□□□□ 0.81
BRCA1-213ENST00000476777 CARMIL2Q6F5E8 1435 aa20.11■□□□□ 0.81
BRCA1-213ENST00000476777 GLI2P10070 1586 aa20.11■□□□□ 0.81
BRCA1-213ENST00000476777 PPRC1Q5VV67 1664 aaKnown RBP20.1■□□□□ 0.81
BRCA1-213ENST00000476777 ILDR1Q86SU0 546 aaPredicted RBP20.1■□□□□ 0.81
BRCA1-213ENST00000476777 UHRF1BP1LA0JNW5 1464 aa20.08■□□□□ 0.81
BRCA1-213ENST00000476777 UACAQ9BZF9 1416 aa20.05■□□□□ 0.8
BRCA1-213ENST00000476777 ADGRL1O94910 1474 aa20.05■□□□□ 0.8
BRCA1-213ENST00000476777 COL17A1Q9UMD9 1497 aaPredicted RBP20.05■□□□□ 0.8
BRCA1-213ENST00000476777 IQGAP2Q13576 1575 aa20.04■□□□□ 0.8
BRCA1-213ENST00000476777 DISP1Q96F81 1524 aa20.02■□□□□ 0.79
BRCA1-213ENST00000476777 EPRSP07814 1512 aaKnown RBP20.01■□□□□ 0.79
BRCA1-213ENST00000476777 KDM5BQ9UGL1 1544 aa20■□□□□ 0.79
BRCA1-213ENST00000476777 MAP3K4Q9Y6R4 1608 aa19.97■□□□□ 0.79
BRCA1-213ENST00000476777 TEX14Q8IWB6 1497 aa19.94■□□□□ 0.78
BRCA1-213ENST00000476777 UGGT2Q9NYU1 1516 aa19.93■□□□□ 0.78
BRCA1-213ENST00000476777 ZCCHC11Q5TAX3 1644 aaKnown RBP19.91■□□□□ 0.78
BRCA1-213ENST00000476777 HECW2Q9P2P5 1572 aa19.89■□□□□ 0.77
BRCA1-213ENST00000476777 RAPGEF2Q9Y4G8 1499 aa19.89■□□□□ 0.77
BRCA1-213ENST00000476777 KIAA0556O60303 1618 aa19.87■□□□□ 0.77
BRCA1-213ENST00000476777 WDR7Q9Y4E6 1490 aa19.86■□□□□ 0.77
BRCA1-213ENST00000476777 CD109Q6YHK3 1445 aa19.79■□□□□ 0.76
BRCA1-213ENST00000476777 MAGI3Q5TCQ9 1506 aa19.79■□□□□ 0.76
BRCA1-213ENST00000476777 KCNH8Q96L42 1107 aa19.77■□□□□ 0.76
BRCA1-213ENST00000476777 CFAP43Q8NDM7 1665 aa19.74■□□□□ 0.75
BRCA1-213ENST00000476777 ABCA8O94911 1581 aa19.74■□□□□ 0.75
BRCA1-213ENST00000476777 GOLGA3Q08378 1498 aa19.72■□□□□ 0.75
BRCA1-213ENST00000476777 CTTNBP2Q8WZ74 1663 aa19.69■□□□□ 0.74
BRCA1-213ENST00000476777 KIF21BO75037 1637 aa19.66■□□□□ 0.74
BRCA1-213ENST00000476777 FOXD1Q16676 465 aa19.66■□□□□ 0.74
BRCA1-213ENST00000476777 ARAP3Q8WWN8 1544 aa19.66■□□□□ 0.74
BRCA1-213ENST00000476777 PRXQ9BXM0 1461 aa19.6■□□□□ 0.73
BRCA1-213ENST00000476777 ARID3CA6NKF2 412 aa19.6■□□□□ 0.73
BRCA1-213ENST00000476777 FBXO41Q8TF61 875 aa19.59■□□□□ 0.73
BRCA1-213ENST00000476777 ATP10BO94823 1461 aa19.59■□□□□ 0.73
BRCA1-213ENST00000476777 PHLDB1Q86UU1 1377 aa19.57■□□□□ 0.72
BRCA1-213ENST00000476777 PTPRMP28827 1452 aa19.56■□□□□ 0.72
BRCA1-213ENST00000476777 ADAMTSL3P82987 1691 aa19.55■□□□□ 0.72
BRCA1-213ENST00000476777 RAPGEF3O95398 923 aa19.54■□□□□ 0.72
BRCA1-213ENST00000476777 P3H3Q8IVL6 736 aa19.54■□□□□ 0.72
BRCA1-213ENST00000476777 ABCA9Q8IUA7 1624 aa19.54■□□□□ 0.72
BRCA1-213ENST00000476777 FAM9AQ8IZU1 332 aaPredicted RBP19.53■□□□□ 0.72
BRCA1-213ENST00000476777 NEO1Q92859 1461 aa19.49■□□□□ 0.71
BRCA1-213ENST00000476777 BCORL1Q5H9F3 1711 aa19.45■□□□□ 0.7
BRCA1-213ENST00000476777 FRMPD1Q5SYB0 1578 aa19.45■□□□□ 0.7
BRCA1-213ENST00000476777 ARID4BQ4LE39 1312 aaPredicted RBP19.45■□□□□ 0.7
BRCA1-213ENST00000476777 PCF11O94913 1555 aaKnown RBP19.44■□□□□ 0.7
BRCA1-213ENST00000476777 SAMD9Q5K651 1589 aa19.43■□□□□ 0.7
BRCA1-213ENST00000476777 RAPGEF6Q8TEU7 1601 aa19.43■□□□□ 0.7
BRCA1-213ENST00000476777 MADDQ8WXG6 1647 aa19.43■□□□□ 0.7
BRCA1-213ENST00000476777 LMTK3Q96Q04 1460 aa19.42■□□□□ 0.7
BRCA1-213ENST00000476777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.42■□□□□ 0.7
BRCA1-213ENST00000476777 HNRNPUL2Q1KMD3 747 aaKnown RBP19.42■□□□□ 0.7
BRCA1-213ENST00000476777 NUP153P49790 1475 aaKnown RBP19.39■□□□□ 0.69
BRCA1-213ENST00000476777 ARHGEF40Q8TER5 1519 aa19.36■□□□□ 0.69
BRCA1-213ENST00000476777 DENND4BO75064 1496 aaPredicted RBP19.35■□□□□ 0.69
BRCA1-213ENST00000476777 CSRNP3Q8WYN3 585 aa19.35■□□□□ 0.69
BRCA1-213ENST00000476777 FHOD3Q2V2M9 1422 aa19.34■□□□□ 0.69
BRCA1-213ENST00000476777 AKNAQ7Z591 1439 aa19.34■□□□□ 0.69
BRCA1-213ENST00000476777 RIMS1Q86UR5 1692 aaKnown RBP19.33■□□□□ 0.69
BRCA1-213ENST00000476777 RICTORQ6R327 1708 aa19.33■□□□□ 0.68
BRCA1-213ENST00000476777 PLEKHD1A6NEE1 506 aa19.32■□□□□ 0.68
BRCA1-213ENST00000476777 HSPA2P54652 639 aa19.32■□□□□ 0.68
BRCA1-213ENST00000476777 FANCAO15360 1455 aa19.3■□□□□ 0.68
BRCA1-213ENST00000476777 RANGAP1P46060 587 aaPredicted RBP19.28■□□□□ 0.68
BRCA1-213ENST00000476777 POGZQ7Z3K3 1410 aa19.27■□□□□ 0.68
BRCA1-213ENST00000476777 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.27■□□□□ 0.68
BRCA1-213ENST00000476777 PLPPR3Q6T4P5 718 aa19.27■□□□□ 0.68
BRCA1-213ENST00000476777 YEATS2Q9ULM3 1422 aa19.26■□□□□ 0.67
BRCA1-213ENST00000476777 ZMYM4Q5VZL5 1548 aa19.26■□□□□ 0.67
BRCA1-213ENST00000476777 SIGLEC1Q9BZZ2 1709 aa19.25■□□□□ 0.67
BRCA1-213ENST00000476777 CFAP74Q9C0B2 1584 aa19.25■□□□□ 0.67
BRCA1-213ENST00000476777 ZFYVE16Q7Z3T8 1539 aa19.25■□□□□ 0.67
BRCA1-213ENST00000476777 TTC37Q6PGP7 1564 aa19.23■□□□□ 0.67
BRCA1-213ENST00000476777 MAGI2Q86UL8 1455 aa19.22■□□□□ 0.67
BRCA1-213ENST00000476777 EFCAB5A4FU69 1503 aa19.22■□□□□ 0.67
BRCA1-213ENST00000476777 CERKQ8TCT0 537 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms