RNA–Protein interactions for RNA: ENST00000476313.5

PDXK-215, Transcript of pyridoxal kinase, human

TSL 3

Gene PDXK, Length 1,704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDXK-215	ENST00000476313	CEP170	Q5SW79	1584 aa		32.66	■■■□□ 2.82
PDXK-215	ENST00000476313	RANGAP1	P46060	587 aa	Predicted RBP	32.65	■■■□□ 2.82
PDXK-215	ENST00000476313	NUP160	Q12769	1436 aa		32.64	■■■□□ 2.82
PDXK-215	ENST00000476313	CEP162	Q5TB80	1403 aa		32.63	■■■□□ 2.81
PDXK-215	ENST00000476313	KIAA0586	Q9BVV6	1533 aa		32.59	■■■□□ 2.81
PDXK-215	ENST00000476313	IQGAP2	Q13576	1575 aa		32.56	■■■□□ 2.8
PDXK-215	ENST00000476313	CLIP1	P30622	1438 aa		32.54	■■■□□ 2.8
PDXK-215	ENST00000476313	ARHGAP35	Q9NRY4	1499 aa		32.41	■■■□□ 2.78
PDXK-215	ENST00000476313	OSCAR	Q8IYS5	282 aa		32.4	■■■□□ 2.78
PDXK-215	ENST00000476313	JPH4	Q96JJ6	628 aa		32.39	■■■□□ 2.78
PDXK-215	ENST00000476313	CLASP1	Q7Z460	1538 aa		32.39	■■■□□ 2.78
PDXK-215	ENST00000476313	UGGT2	Q9NYU1	1516 aa		32.39	■■■□□ 2.78
PDXK-215	ENST00000476313	EFCAB5	A4FU69	1503 aa		32.36	■■■□□ 2.77
PDXK-215	ENST00000476313	P3H3	Q8IVL6	736 aa		32.34	■■■□□ 2.77
PDXK-215	ENST00000476313	SAMD9	Q5K651	1589 aa		32.33	■■■□□ 2.77
PDXK-215	ENST00000476313	ARAP1	Q96P48	1450 aa		32.3	■■■□□ 2.76
PDXK-215	ENST00000476313	SHROOM2	Q13796	1616 aa		32.27	■■■□□ 2.76
PDXK-215	ENST00000476313	DISP1	Q96F81	1524 aa		32.27	■■■□□ 2.76
PDXK-215	ENST00000476313	FHOD3	Q2V2M9	1422 aa		32.25	■■■□□ 2.75
PDXK-215	ENST00000476313	KIAA0556	O60303	1618 aa		32.23	■■■□□ 2.75
PDXK-215	ENST00000476313	PRG4	Q92954	1404 aa	Predicted RBP	32.23	■■■□□ 2.75
PDXK-215	ENST00000476313	CARMIL2	Q6F5E8	1435 aa		32.21	■■■□□ 2.75
PDXK-215	ENST00000476313	VPS8	Q8N3P4	1428 aa		32.15	■■■□□ 2.74
PDXK-215	ENST00000476313	ERCC6L2	Q5T890	1561 aa		32.11	■■■□□ 2.73
PDXK-215	ENST00000476313	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32.08	■■■□□ 2.73
PDXK-215	ENST00000476313	FMN1	Q68DA7	1419 aa		32.07	■■■□□ 2.72
PDXK-215	ENST00000476313	PTPRG	P23470	1445 aa		31.96	■■■□□ 2.71
PDXK-215	ENST00000476313	PCF11	O94913	1555 aa	Known RBP	31.96	■■■□□ 2.71
PDXK-215	ENST00000476313	CASKIN1	Q8WXD9	1431 aa		31.92	■■■□□ 2.7
PDXK-215	ENST00000476313	ATP1B4	Q9UN42	357 aa	Predicted RBP	31.92	■■■□□ 2.7
PDXK-215	ENST00000476313	FYCO1	Q9BQS8	1478 aa		31.89	■■■□□ 2.7
PDXK-215	ENST00000476313	PLB1	Q6P1J6	1458 aa		31.87	■■■□□ 2.69
PDXK-215	ENST00000476313	ARHGEF11	O15085	1522 aa		31.86	■■■□□ 2.69
PDXK-215	ENST00000476313	RAPGEF6	Q8TEU7	1601 aa		31.84	■■■□□ 2.69
PDXK-215	ENST00000476313	APLP2	Q06481	763 aa		31.83	■■■□□ 2.69
PDXK-215	ENST00000476313	ABCA8	O94911	1581 aa		31.81	■■■□□ 2.68
PDXK-215	ENST00000476313	HECW1	Q76N89	1606 aa		31.8	■■■□□ 2.68
PDXK-215	ENST00000476313	UACA	Q9BZF9	1416 aa		31.76	■■■□□ 2.68
PDXK-215	ENST00000476313	RIMBP3C	A6NJZ7	1639 aa		31.76	■■■□□ 2.67
PDXK-215	ENST00000476313	RIMBP3B	A6NNM3	1639 aa		31.76	■■■□□ 2.67
PDXK-215	ENST00000476313	RIMBP3	Q9UFD9	1639 aa		31.76	■■■□□ 2.67
PDXK-215	ENST00000476313	LRRIQ1	Q96JM4	1722 aa		31.75	■■■□□ 2.67
PDXK-215	ENST00000476313	NUP153	P49790	1475 aa	Known RBP	31.75	■■■□□ 2.67
PDXK-215	ENST00000476313	ARID3C	A6NKF2	412 aa		31.73	■■■□□ 2.67
PDXK-215	ENST00000476313	PPARGC1B	Q86YN6	1023 aa	Known RBP	31.72	■■■□□ 2.67
PDXK-215	ENST00000476313	EPRS	P07814	1512 aa	Known RBP	31.7	■■■□□ 2.67
PDXK-215	ENST00000476313	TIAM1	Q13009	1591 aa		31.69	■■■□□ 2.66
PDXK-215	ENST00000476313	MAP3K1	Q13233	1512 aa		31.68	■■■□□ 2.66
PDXK-215	ENST00000476313	ABCC2	Q92887	1545 aa		31.68	■■■□□ 2.66
PDXK-215	ENST00000476313	CCDC18	Q5T9S5	1454 aa		31.67	■■■□□ 2.66
PDXK-215	ENST00000476313	CFAP43	Q8NDM7	1665 aa		31.66	■■■□□ 2.66
PDXK-215	ENST00000476313	CDK13	Q14004	1512 aa	Known RBP	31.66	■■■□□ 2.66
PDXK-215	ENST00000476313	UHRF1BP1L	A0JNW5	1464 aa		31.63	■■■□□ 2.65
PDXK-215	ENST00000476313	KANK4	Q5T7N3	995 aa	Predicted RBP	31.63	■■■□□ 2.65
PDXK-215	ENST00000476313	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	31.61	■■■□□ 2.65
PDXK-215	ENST00000476313	HNRNPUL2	Q1KMD3	747 aa	Known RBP	31.61	■■■□□ 2.65
PDXK-215	ENST00000476313	ADCY10	Q96PN6	1610 aa		31.59	■■■□□ 2.65
PDXK-215	ENST00000476313	ATP10B	O94823	1461 aa		31.59	■■■□□ 2.65
PDXK-215	ENST00000476313	CYB5RL	Q6IPT4	315 aa		31.58	■■■□□ 2.65
PDXK-215	ENST00000476313	LRRC9	Q6ZRR7	1453 aa		31.56	■■■□□ 2.64
PDXK-215	ENST00000476313	MTUS2	Q5JR59	1369 aa		31.51	■■■□□ 2.63
PDXK-215	ENST00000476313	KDM5B	Q9UGL1	1544 aa		31.5	■■■□□ 2.63
PDXK-215	ENST00000476313	CDK11A	Q9UQ88	783 aa	Predicted RBP	31.49	■■■□□ 2.63
PDXK-215	ENST00000476313	MAGI3	Q5TCQ9	1506 aa		31.49	■■■□□ 2.63
PDXK-215	ENST00000476313	ZCCHC11	Q5TAX3	1644 aa	Known RBP	31.48	■■■□□ 2.63
PDXK-215	ENST00000476313	EHBP1L1	Q8N3D4	1523 aa		31.44	■■■□□ 2.62
PDXK-215	ENST00000476313	PLEKHD1	A6NEE1	506 aa		31.42	■■■□□ 2.62
PDXK-215	ENST00000476313	DNAJC5	Q9H3Z4	198 aa		31.42	■■■□□ 2.62
PDXK-215	ENST00000476313	NPM1	P06748	294 aa	Known RBP eCLIP	31.39	■■■□□ 2.62
PDXK-215	ENST00000476313	TRO	Q12816	1431 aa	Predicted RBP	31.38	■■■□□ 2.61
PDXK-215	ENST00000476313	SUPT6H	Q7KZ85	1726 aa	Known RBP	31.33	■■■□□ 2.61
PDXK-215	ENST00000476313	NCOA2	Q15596	1464 aa		31.29	■■■□□ 2.6
PDXK-215	ENST00000476313	KIF14	Q15058	1648 aa		31.26	■■■□□ 2.59
PDXK-215	ENST00000476313	ASXL2	Q76L83	1435 aa		31.25	■■■□□ 2.59
PDXK-215	ENST00000476313	PHLDB1	Q86UU1	1377 aa		31.24	■■■□□ 2.59
PDXK-215	ENST00000476313	WDR7	Q9Y4E6	1490 aa		31.23	■■■□□ 2.59
PDXK-215	ENST00000476313	KCNH8	Q96L42	1107 aa		31.23	■■■□□ 2.59
PDXK-215	ENST00000476313	TRIM26	Q12899	539 aa	Predicted RBP	31.17	■■■□□ 2.58
PDXK-215	ENST00000476313	MAPKBP1	O60336	1514 aa		31.16	■■■□□ 2.58
PDXK-215	ENST00000476313	ABCC10	Q5T3U5	1492 aa		31.13	■■■□□ 2.57
PDXK-215	ENST00000476313	CCNB3	Q8WWL7	1395 aa		31.13	■■■□□ 2.57
PDXK-215	ENST00000476313	MYOM3	Q5VTT5	1437 aa		31.12	■■■□□ 2.57
PDXK-215	ENST00000476313	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.11	■■■□□ 2.57
PDXK-215	ENST00000476313	TTC37	Q6PGP7	1564 aa		31.08	■■■□□ 2.57
PDXK-215	ENST00000476313	RRBP1	Q9P2E9	1410 aa	Known RBP	31.07	■■■□□ 2.56
PDXK-215	ENST00000476313	GPATCH8	Q9UKJ3	1502 aa	Known RBP	31.06	■■■□□ 2.56
PDXK-215	ENST00000476313	FGD6	Q6ZV73	1430 aa		31.06	■■■□□ 2.56
PDXK-215	ENST00000476313	CDC42BPA	Q5VT25	1732 aa		31.04	■■■□□ 2.56
PDXK-215	ENST00000476313	ITSN2	Q9NZM3	1697 aa		31.03	■■■□□ 2.56
PDXK-215	ENST00000476313	PCGF6	Q9BYE7	350 aa		31	■■■□□ 2.55
PDXK-215	ENST00000476313	ABCA9	Q8IUA7	1624 aa		31	■■■□□ 2.55
PDXK-215	ENST00000476313	MIA2	Q96PC5	1412 aa		31	■■■□□ 2.55
PDXK-215	ENST00000476313	CFDP1	Q9UEE9	299 aa	Predicted RBP	30.99	■■■□□ 2.55
PDXK-215	ENST00000476313	MYO5C	Q9NQX4	1742 aa		30.98	■■■□□ 2.55
PDXK-215	ENST00000476313	FAM50A	Q14320	339 aa	Known RBP	30.96	■■■□□ 2.55
PDXK-215	ENST00000476313	PREX2	Q70Z35	1606 aa		30.96	■■■□□ 2.55
PDXK-215	ENST00000476313	PTPN23	Q9H3S7	1636 aa		30.96	■■■□□ 2.55
PDXK-215	ENST00000476313	CDC42BPB	Q9Y5S2	1711 aa		30.95	■■■□□ 2.54
PDXK-215	ENST00000476313	PLCH2	O75038	1416 aa		30.92	■■■□□ 2.54
PDXK-215	ENST00000476313	ZNF777	Q9ULD5	760 aa	Predicted RBP	30.91	■■■□□ 2.54

Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms