RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 JPH4Q96JJ6 628 aa36.13■■■■□ 3.37
LIME1-204ENST00000476183 PRG4Q92954 1404 aaPredicted RBP36.08■■■■□ 3.37
LIME1-204ENST00000476183 KIAA0586Q9BVV6 1533 aa36.07■■■■□ 3.36
LIME1-204ENST00000476183 RAPGEF2Q9Y4G8 1499 aa35.93■■■■□ 3.34
LIME1-204ENST00000476183 TRHP20396 242 aaPredicted RBP35.83■■■■□ 3.33
LIME1-204ENST00000476183 IQGAP2Q13576 1575 aa35.81■■■■□ 3.32
LIME1-204ENST00000476183 PRXQ9BXM0 1461 aa35.76■■■■□ 3.32
LIME1-204ENST00000476183 CARMIL2Q6F5E8 1435 aa35.66■■■■□ 3.3
LIME1-204ENST00000476183 DISP1Q96F81 1524 aa35.63■■■■□ 3.29
LIME1-204ENST00000476183 UGGT2Q9NYU1 1516 aa35.62■■■■□ 3.29
LIME1-204ENST00000476183 CSRNP3Q8WYN3 585 aa35.62■■■■□ 3.29
LIME1-204ENST00000476183 CTTNBP2Q8WZ74 1663 aa35.61■■■■□ 3.29
LIME1-204ENST00000476183 ADCY10Q96PN6 1610 aa35.61■■■■□ 3.29
LIME1-204ENST00000476183 PTPRGP23470 1445 aa35.6■■■■□ 3.29
LIME1-204ENST00000476183 CHIC1Q5VXU3 224 aa35.6■■■■□ 3.29
LIME1-204ENST00000476183 TNIKQ9UKE5 1360 aa35.59■■■■□ 3.29
LIME1-204ENST00000476183 EEA1Q15075 1411 aa35.57■■■■□ 3.28
LIME1-204ENST00000476183 TTBK1Q5TCY1 1321 aaPredicted RBP35.55■■■■□ 3.28
LIME1-204ENST00000476183 KIAA0556O60303 1618 aa35.5■■■■□ 3.27
LIME1-204ENST00000476183 FAM9AQ8IZU1 332 aaPredicted RBP35.47■■■■□ 3.27
LIME1-204ENST00000476183 NPM1P06748 294 aaKnown RBP eCLIP35.45■■■■□ 3.27
LIME1-204ENST00000476183 MAPKBP1O60336 1514 aa35.41■■■■□ 3.26
LIME1-204ENST00000476183 KIF13AQ9H1H9 1805 aa35.36■■■■□ 3.25
LIME1-204ENST00000476183 UACAQ9BZF9 1416 aa35.36■■■■□ 3.25
LIME1-204ENST00000476183 UHRF1BP1LA0JNW5 1464 aa35.35■■■■□ 3.25
LIME1-204ENST00000476183 GOLGA3Q08378 1498 aa35.35■■■■□ 3.25
LIME1-204ENST00000476183 ABCC2Q92887 1545 aa35.33■■■■□ 3.25
LIME1-204ENST00000476183 ABCC10Q5T3U5 1492 aa35.29■■■■□ 3.24
LIME1-204ENST00000476183 KIF21BO75037 1637 aa35.27■■■■□ 3.24
LIME1-204ENST00000476183 DIP2BQ9P265 1576 aa35.24■■■■□ 3.23
LIME1-204ENST00000476183 FAM69CQ0P6D2 419 aa35.23■■■■□ 3.23
LIME1-204ENST00000476183 PLB1Q6P1J6 1458 aa35.2■■■■□ 3.23
LIME1-204ENST00000476183 KDM5BQ9UGL1 1544 aa35.18■■■■□ 3.22
LIME1-204ENST00000476183 P3H3Q8IVL6 736 aa35.16■■■■□ 3.22
LIME1-204ENST00000476183 SAMD9Q5K651 1589 aa35.16■■■■□ 3.22
LIME1-204ENST00000476183 ASXL2Q76L83 1435 aa35.15■■■■□ 3.22
LIME1-204ENST00000476183 ABCA8O94911 1581 aa35.14■■■■□ 3.22
LIME1-204ENST00000476183 ZCCHC11Q5TAX3 1644 aaKnown RBP35.12■■■■□ 3.21
LIME1-204ENST00000476183 RANGAP1P46060 587 aaPredicted RBP35.07■■■■□ 3.2
LIME1-204ENST00000476183 EHMT2Q96KQ7 1210 aa35.06■■■■□ 3.2
LIME1-204ENST00000476183 GLI2P10070 1586 aa34.97■■■■□ 3.19
LIME1-204ENST00000476183 TSPOAP1O95153 1857 aa34.97■■■■□ 3.19
LIME1-204ENST00000476183 UBTFP17480 764 aaKnown RBP34.96■■■■□ 3.19
LIME1-204ENST00000476183 FHOD3Q2V2M9 1422 aa34.96■■■■□ 3.19
LIME1-204ENST00000476183 EPRSP07814 1512 aaKnown RBP34.95■■■■□ 3.19
LIME1-204ENST00000476183 EFCAB5A4FU69 1503 aa34.91■■■■□ 3.18
LIME1-204ENST00000476183 WDR7Q9Y4E6 1490 aa34.9■■■■□ 3.18
LIME1-204ENST00000476183 RAPGEF6Q8TEU7 1601 aa34.88■■■■□ 3.17
LIME1-204ENST00000476183 ARID3CA6NKF2 412 aa34.87■■■■□ 3.17
LIME1-204ENST00000476183 ATP10BO94823 1461 aa34.85■■■■□ 3.17
LIME1-204ENST00000476183 PPRC1Q5VV67 1664 aaKnown RBP34.84■■■■□ 3.17
LIME1-204ENST00000476183 MAP3K4Q9Y6R4 1608 aa34.81■■■■□ 3.16
LIME1-204ENST00000476183 NUP153P49790 1475 aaKnown RBP34.78■■■■□ 3.16
LIME1-204ENST00000476183 KCNH8Q96L42 1107 aa34.75■■■■□ 3.15
LIME1-204ENST00000476183 ARHGAP35Q9NRY4 1499 aa34.74■■■■□ 3.15
LIME1-204ENST00000476183 KDM6BO15054 1643 aa34.73■■■■□ 3.15
LIME1-204ENST00000476183 CFAP43Q8NDM7 1665 aa34.63■■■■□ 3.13
LIME1-204ENST00000476183 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.63■■■■□ 3.13
LIME1-204ENST00000476183 HNRNPUL2Q1KMD3 747 aaKnown RBP34.63■■■■□ 3.13
LIME1-204ENST00000476183 TEX14Q8IWB6 1497 aa34.62■■■■□ 3.13
LIME1-204ENST00000476183 CD109Q6YHK3 1445 aa34.62■■■■□ 3.13
LIME1-204ENST00000476183 FMN1Q68DA7 1419 aa34.57■■■■□ 3.13
LIME1-204ENST00000476183 MAGI3Q5TCQ9 1506 aa34.57■■■■□ 3.12
LIME1-204ENST00000476183 COL17A1Q9UMD9 1497 aaPredicted RBP34.57■■■■□ 3.12
LIME1-204ENST00000476183 ABCA9Q8IUA7 1624 aa34.52■■■■□ 3.12
LIME1-204ENST00000476183 CDK13Q14004 1512 aaKnown RBP34.5■■■■□ 3.11
LIME1-204ENST00000476183 PLEKHD1A6NEE1 506 aa34.47■■■■□ 3.11
LIME1-204ENST00000476183 HECW1Q76N89 1606 aa34.46■■■■□ 3.11
LIME1-204ENST00000476183 ATP1B4Q9UN42 357 aaPredicted RBP34.44■■■■□ 3.1
LIME1-204ENST00000476183 CLIP1P30622 1438 aa34.39■■■■□ 3.1
LIME1-204ENST00000476183 LRRIQ1Q96JM4 1722 aa34.35■■■■□ 3.09
LIME1-204ENST00000476183 PCF11O94913 1555 aaKnown RBP34.32■■■■□ 3.09
LIME1-204ENST00000476183 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.32■■■■□ 3.08
LIME1-204ENST00000476183 CASKIN1Q8WXD9 1431 aa34.3■■■■□ 3.08
LIME1-204ENST00000476183 TTC37Q6PGP7 1564 aa34.28■■■■□ 3.08
LIME1-204ENST00000476183 ARAP3Q8WWN8 1544 aa34.28■■■■□ 3.08
LIME1-204ENST00000476183 NEO1Q92859 1461 aa34.25■■■■□ 3.07
LIME1-204ENST00000476183 PHLDB1Q86UU1 1377 aa34.23■■■■□ 3.07
LIME1-204ENST00000476183 AEBP2Q6ZN18 517 aaPredicted RBP34.22■■■■□ 3.07
LIME1-204ENST00000476183 CDK11AQ9UQ88 783 aaPredicted RBP34.22■■■■□ 3.07
LIME1-204ENST00000476183 TROQ12816 1431 aaPredicted RBP34.19■■■■□ 3.06
LIME1-204ENST00000476183 FYCO1Q9BQS8 1478 aa34.19■■■■□ 3.06
LIME1-204ENST00000476183 CEP162Q5TB80 1403 aa34.18■■■■□ 3.06
LIME1-204ENST00000476183 LOC105371045A0A1W2PR82 267 aa34.17■■■■□ 3.06
LIME1-204ENST00000476183 KIF14Q15058 1648 aa34.17■■■■□ 3.06
LIME1-204ENST00000476183 CCDC18Q5T9S5 1454 aa34.17■■■■□ 3.06
LIME1-204ENST00000476183 KDM4FA0A1W2PPD8 638 aa34.14■■■■□ 3.06
LIME1-204ENST00000476183 FANCAO15360 1455 aa34.14■■■■□ 3.06
LIME1-204ENST00000476183 RAPGEF3O95398 923 aa34.12■■■■□ 3.05
LIME1-204ENST00000476183 AKNAQ7Z591 1439 aa34.11■■■■□ 3.05
LIME1-204ENST00000476183 PLCH2O75038 1416 aa34.1■■■■□ 3.05
LIME1-204ENST00000476183 FRMPD1Q5SYB0 1578 aa34.08■■■■□ 3.05
LIME1-204ENST00000476183 CFAP74Q9C0B2 1584 aa34.08■■■■□ 3.05
LIME1-204ENST00000476183 MYO5CQ9NQX4 1742 aa34.04■■■■□ 3.04
LIME1-204ENST00000476183 DENND4BO75064 1496 aaPredicted RBP34.01■■■■□ 3.04
LIME1-204ENST00000476183 ADGRL1O94910 1474 aa34.01■■■■□ 3.03
LIME1-204ENST00000476183 RICTORQ6R327 1708 aa33.99■■■■□ 3.03
LIME1-204ENST00000476183 EFCAB2Q5VUJ9 269 aa33.94■■■■□ 3.02
LIME1-204ENST00000476183 ARHGAP5Q13017 1502 aa33.91■■■■□ 3.02
LIME1-204ENST00000476183 SCAPERQ9BY12 1400 aa33.91■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms