RNA–Protein interactions for RNA: ENST00000475996.1

HLA-F-224, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-224ENST00000475996 NUP160Q12769 1436 aa20.8■□□□□ 0.92
HLA-F-224ENST00000475996 CTTNBP2Q8WZ74 1663 aa20.78■□□□□ 0.92
HLA-F-224ENST00000475996 OSCARQ8IYS5 282 aa20.73■□□□□ 0.91
HLA-F-224ENST00000475996 TNIKQ9UKE5 1360 aa20.73■□□□□ 0.91
HLA-F-224ENST00000475996 KIAA0586Q9BVV6 1533 aa20.73■□□□□ 0.91
HLA-F-224ENST00000475996 RANGAP1P46060 587 aaPredicted RBP20.71■□□□□ 0.91
HLA-F-224ENST00000475996 IQGAP2Q13576 1575 aa20.7■□□□□ 0.9
HLA-F-224ENST00000475996 CLASP1Q7Z460 1538 aa20.69■□□□□ 0.9
HLA-F-224ENST00000475996 JPH4Q96JJ6 628 aa20.63■□□□□ 0.89
HLA-F-224ENST00000475996 CEP162Q5TB80 1403 aa20.6■□□□□ 0.89
HLA-F-224ENST00000475996 UGGT2Q9NYU1 1516 aa20.59■□□□□ 0.89
HLA-F-224ENST00000475996 SHROOM2Q13796 1616 aa20.58■□□□□ 0.88
HLA-F-224ENST00000475996 CLIP1P30622 1438 aa20.56■□□□□ 0.88
HLA-F-224ENST00000475996 P3H3Q8IVL6 736 aa20.55■□□□□ 0.88
HLA-F-224ENST00000475996 PRG4Q92954 1404 aaPredicted RBP20.55■□□□□ 0.88
HLA-F-224ENST00000475996 ARHGAP35Q9NRY4 1499 aa20.52■□□□□ 0.88
HLA-F-224ENST00000475996 DISP1Q96F81 1524 aa20.52■□□□□ 0.88
HLA-F-224ENST00000475996 SAMD9Q5K651 1589 aa20.51■□□□□ 0.87
HLA-F-224ENST00000475996 ERCC6L2Q5T890 1561 aa20.51■□□□□ 0.87
HLA-F-224ENST00000475996 KIAA0556O60303 1618 aa20.51■□□□□ 0.87
HLA-F-224ENST00000475996 EFCAB5A4FU69 1503 aa20.5■□□□□ 0.87
HLA-F-224ENST00000475996 CARMIL2Q6F5E8 1435 aa20.49■□□□□ 0.87
HLA-F-224ENST00000475996 FHOD3Q2V2M9 1422 aa20.48■□□□□ 0.87
HLA-F-224ENST00000475996 TTBK1Q5TCY1 1321 aaPredicted RBP20.46■□□□□ 0.87
HLA-F-224ENST00000475996 ARAP1Q96P48 1450 aa20.45■□□□□ 0.86
HLA-F-224ENST00000475996 ARHGEF11O15085 1522 aa20.42■□□□□ 0.86
HLA-F-224ENST00000475996 RIMBP3CA6NJZ7 1639 aa20.38■□□□□ 0.85
HLA-F-224ENST00000475996 RIMBP3BA6NNM3 1639 aa20.38■□□□□ 0.85
HLA-F-224ENST00000475996 RIMBP3Q9UFD9 1639 aa20.38■□□□□ 0.85
HLA-F-224ENST00000475996 PTPRGP23470 1445 aa20.35■□□□□ 0.85
HLA-F-224ENST00000475996 FMN1Q68DA7 1419 aa20.31■□□□□ 0.84
HLA-F-224ENST00000475996 VPS8Q8N3P4 1428 aa20.29■□□□□ 0.84
HLA-F-224ENST00000475996 DNAJC5Q9H3Z4 198 aa20.28■□□□□ 0.84
HLA-F-224ENST00000475996 PLB1Q6P1J6 1458 aa20.28■□□□□ 0.84
HLA-F-224ENST00000475996 PCF11O94913 1555 aaKnown RBP20.26■□□□□ 0.83
HLA-F-224ENST00000475996 ATP1B4Q9UN42 357 aaPredicted RBP20.26■□□□□ 0.83
HLA-F-224ENST00000475996 RAPGEF6Q8TEU7 1601 aa20.24■□□□□ 0.83
HLA-F-224ENST00000475996 ABCA8O94911 1581 aa20.24■□□□□ 0.83
HLA-F-224ENST00000475996 CYB5RLQ6IPT4 315 aa20.23■□□□□ 0.83
HLA-F-224ENST00000475996 UACAQ9BZF9 1416 aa20.23■□□□□ 0.83
HLA-F-224ENST00000475996 CASKIN1Q8WXD9 1431 aa20.21■□□□□ 0.83
HLA-F-224ENST00000475996 FYCO1Q9BQS8 1478 aa20.2■□□□□ 0.82
HLA-F-224ENST00000475996 ARID3CA6NKF2 412 aa20.2■□□□□ 0.82
HLA-F-224ENST00000475996 HECW1Q76N89 1606 aa20.18■□□□□ 0.82
HLA-F-224ENST00000475996 ABCC2Q92887 1545 aa20.18■□□□□ 0.82
HLA-F-224ENST00000475996 ADCY10Q96PN6 1610 aa20.17■□□□□ 0.82
HLA-F-224ENST00000475996 NUP153P49790 1475 aaKnown RBP20.16■□□□□ 0.82
HLA-F-224ENST00000475996 UHRF1BP1LA0JNW5 1464 aa20.15■□□□□ 0.82
HLA-F-224ENST00000475996 LRRIQ1Q96JM4 1722 aa20.15■□□□□ 0.82
HLA-F-224ENST00000475996 CDK13Q14004 1512 aaKnown RBP20.12■□□□□ 0.81
HLA-F-224ENST00000475996 EPRSP07814 1512 aaKnown RBP20.11■□□□□ 0.81
HLA-F-224ENST00000475996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.1■□□□□ 0.81
HLA-F-224ENST00000475996 HNRNPUL2Q1KMD3 747 aaKnown RBP20.1■□□□□ 0.81
HLA-F-224ENST00000475996 ATP10BO94823 1461 aa20.09■□□□□ 0.81
HLA-F-224ENST00000475996 APLP2Q06481 763 aa20.08■□□□□ 0.81
HLA-F-224ENST00000475996 CCDC18Q5T9S5 1454 aa20.08■□□□□ 0.8
HLA-F-224ENST00000475996 ZCCHC11Q5TAX3 1644 aaKnown RBP20.07■□□□□ 0.8
HLA-F-224ENST00000475996 KDM5BQ9UGL1 1544 aa20.06■□□□□ 0.8
HLA-F-224ENST00000475996 TIAM1Q13009 1591 aa20.05■□□□□ 0.8
HLA-F-224ENST00000475996 CFAP43Q8NDM7 1665 aa20.05■□□□□ 0.8
HLA-F-224ENST00000475996 NPM1P06748 294 aaKnown RBP eCLIP20.04■□□□□ 0.8
HLA-F-224ENST00000475996 PPARGC1BQ86YN6 1023 aaKnown RBP20.02■□□□□ 0.79
HLA-F-224ENST00000475996 MAP3K1Q13233 1512 aa20■□□□□ 0.79
HLA-F-224ENST00000475996 KANK4Q5T7N3 995 aaPredicted RBP19.99■□□□□ 0.79
HLA-F-224ENST00000475996 MAGI3Q5TCQ9 1506 aa19.98■□□□□ 0.79
HLA-F-224ENST00000475996 CDK11AQ9UQ88 783 aaPredicted RBP19.97■□□□□ 0.79
HLA-F-224ENST00000475996 MTUS2Q5JR59 1369 aa19.96■□□□□ 0.79
HLA-F-224ENST00000475996 PLEKHD1A6NEE1 506 aa19.96■□□□□ 0.79
HLA-F-224ENST00000475996 LRRC9Q6ZRR7 1453 aa19.95■□□□□ 0.78
HLA-F-224ENST00000475996 ASXL2Q76L83 1435 aa19.94■□□□□ 0.78
HLA-F-224ENST00000475996 EHBP1L1Q8N3D4 1523 aa19.92■□□□□ 0.78
HLA-F-224ENST00000475996 TROQ12816 1431 aaPredicted RBP19.92■□□□□ 0.78
HLA-F-224ENST00000475996 WDR7Q9Y4E6 1490 aa19.9■□□□□ 0.78
HLA-F-224ENST00000475996 KCNH8Q96L42 1107 aa19.9■□□□□ 0.78
HLA-F-224ENST00000475996 MAPKBP1O60336 1514 aa19.89■□□□□ 0.78
HLA-F-224ENST00000475996 KIF14Q15058 1648 aa19.87■□□□□ 0.77
HLA-F-224ENST00000475996 SUPT6HQ7KZ85 1726 aaKnown RBP19.85■□□□□ 0.77
HLA-F-224ENST00000475996 NCOA2Q15596 1464 aa19.82■□□□□ 0.76
HLA-F-224ENST00000475996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.79■□□□□ 0.76
HLA-F-224ENST00000475996 TTC37Q6PGP7 1564 aa19.78■□□□□ 0.76
HLA-F-224ENST00000475996 ABCC10Q5T3U5 1492 aa19.77■□□□□ 0.76
HLA-F-224ENST00000475996 DIP2BQ9P265 1576 aa19.76■□□□□ 0.75
HLA-F-224ENST00000475996 PHLDB1Q86UU1 1377 aa19.76■□□□□ 0.75
HLA-F-224ENST00000475996 FAM69CQ0P6D2 419 aa19.75■□□□□ 0.75
HLA-F-224ENST00000475996 CCNB3Q8WWL7 1395 aa19.75■□□□□ 0.75
HLA-F-224ENST00000475996 ABCA9Q8IUA7 1624 aa19.74■□□□□ 0.75
HLA-F-224ENST00000475996 KIF13AQ9H1H9 1805 aa19.72■□□□□ 0.75
HLA-F-224ENST00000475996 CDC42BPAQ5VT25 1732 aa19.71■□□□□ 0.75
HLA-F-224ENST00000475996 GLI2P10070 1586 aa19.71■□□□□ 0.75
HLA-F-224ENST00000475996 GPATCH8Q9UKJ3 1502 aaKnown RBP19.71■□□□□ 0.74
HLA-F-224ENST00000475996 MYO5CQ9NQX4 1742 aa19.7■□□□□ 0.74
HLA-F-224ENST00000475996 MYOM3Q5VTT5 1437 aa19.69■□□□□ 0.74
HLA-F-224ENST00000475996 CD109Q6YHK3 1445 aa19.68■□□□□ 0.74
HLA-F-224ENST00000475996 TRHP20396 242 aaPredicted RBP19.68■□□□□ 0.74
HLA-F-224ENST00000475996 ITSN2Q9NZM3 1697 aa19.68■□□□□ 0.74
HLA-F-224ENST00000475996 PREX2Q70Z35 1606 aa19.67■□□□□ 0.74
HLA-F-224ENST00000475996 CDC42BPBQ9Y5S2 1711 aa19.67■□□□□ 0.74
HLA-F-224ENST00000475996 MAP3K4Q9Y6R4 1608 aa19.66■□□□□ 0.74
HLA-F-224ENST00000475996 TSPOAP1O95153 1857 aa19.66■□□□□ 0.74
HLA-F-224ENST00000475996 PLCH2O75038 1416 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms