RNA–Protein interactions for RNA: ENST00000475996.1

HLA-F-224, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-224ENST00000475996 NISCHQ9Y2I1 1504 aa30.12■■■□□ 2.41
HLA-F-224ENST00000475996 CCDC180Q9P1Z9 1646 aa26.52■■□□□ 1.84
HLA-F-224ENST00000475996 ABCC9O60706 1549 aa25.58■■□□□ 1.68
HLA-F-224ENST00000475996 ZCCHC6Q5VYS8 1495 aaKnown RBP25.2■■□□□ 1.62
HLA-F-224ENST00000475996 DCAF8L2P0C7V8 631 aa25.07■■□□□ 1.6
HLA-F-224ENST00000475996 DCAF1Q9Y4B6 1507 aa24.88■■□□□ 1.57
HLA-F-224ENST00000475996 NACADO15069 1562 aa24.82■■□□□ 1.56
HLA-F-224ENST00000475996 MYO15BQ96JP2 1530 aa24.78■■□□□ 1.56
HLA-F-224ENST00000475996 RB1CC1Q8TDY2 1594 aa24.74■■□□□ 1.55
HLA-F-224ENST00000475996 SCRIBQ14160 1630 aa24.34■■□□□ 1.49
HLA-F-224ENST00000475996 UNC13AQ9UPW8 1703 aa24.25■■□□□ 1.47
HLA-F-224ENST00000475996 SHROOM4Q9ULL8 1493 aa24.24■■□□□ 1.47
HLA-F-224ENST00000475996 PABPN1Q86U42 306 aaKnown RBP eCLIP24.01■■□□□ 1.43
HLA-F-224ENST00000475996 BICRAQ9NZM4 1560 aa24■■□□□ 1.43
HLA-F-224ENST00000475996 CECR2Q9BXF3 1484 aa23.46■■□□□ 1.35
HLA-F-224ENST00000475996 EIF4G1Q04637 1599 aaKnown RBP23.32■■□□□ 1.32
HLA-F-224ENST00000475996 BAZ1AQ9NRL2 1556 aaPredicted RBP23.3■■□□□ 1.32
HLA-F-224ENST00000475996 SMARCA4P51532 1647 aa23.28■■□□□ 1.32
HLA-F-224ENST00000475996 MROH2BQ7Z745 1585 aa23.26■■□□□ 1.31
HLA-F-224ENST00000475996 RSF1Q96T23 1441 aaPredicted RBP23.15■■□□□ 1.3
HLA-F-224ENST00000475996 CC2D2AQ9P2K1 1620 aa23.12■■□□□ 1.29
HLA-F-224ENST00000475996 WIZO95785 1651 aa23.06■■□□□ 1.28
HLA-F-224ENST00000475996 SUPT5HO00267 1087 aaKnown RBP23.04■■□□□ 1.28
HLA-F-224ENST00000475996 DNAJC5BQ9UF47 199 aa23.03■■□□□ 1.28
HLA-F-224ENST00000475996 ATAD2BQ9ULI0 1458 aa23.02■■□□□ 1.28
HLA-F-224ENST00000475996 SMARCA2P51531 1590 aa22.99■■□□□ 1.27
HLA-F-224ENST00000475996 PEG3Q9GZU2 1588 aa22.99■■□□□ 1.27
HLA-F-224ENST00000475996 NCAPD3P42695 1498 aa22.89■■□□□ 1.25
HLA-F-224ENST00000475996 BAZ1BQ9UIG0 1483 aaKnown RBP22.87■■□□□ 1.25
HLA-F-224ENST00000475996 HMGXB3Q12766 1538 aa22.83■■□□□ 1.25
HLA-F-224ENST00000475996 TOP2AP11388 1531 aaKnown RBP22.79■■□□□ 1.24
HLA-F-224ENST00000475996 CCDC88BA6NC98 1476 aa22.55■■□□□ 1.2
HLA-F-224ENST00000475996 NESP48681 1621 aa22.28■■□□□ 1.16
HLA-F-224ENST00000475996 CADPSQ9ULU8 1353 aa22.28■■□□□ 1.16
HLA-F-224ENST00000475996 CFTRP13569 1480 aa22.24■■□□□ 1.15
HLA-F-224ENST00000475996 LAMC3Q9Y6N6 1575 aa22.22■■□□□ 1.15
HLA-F-224ENST00000475996 PRDM2Q13029 1718 aa22.14■■□□□ 1.13
HLA-F-224ENST00000475996 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
HLA-F-224ENST00000475996 FANCD2Q9BXW9 1451 aa22.05■■□□□ 1.12
HLA-F-224ENST00000475996 KIF21AQ7Z4S6 1674 aa22.02■■□□□ 1.12
HLA-F-224ENST00000475996 ERCC6Q03468 1493 aa21.98■■□□□ 1.11
HLA-F-224ENST00000475996 CEP164Q9UPV0 1460 aa21.97■■□□□ 1.11
HLA-F-224ENST00000475996 ABCC8Q09428 1581 aa21.92■■□□□ 1.1
HLA-F-224ENST00000475996 WRNQ14191 1432 aaPredicted RBP eCLIP21.82■■□□□ 1.08
HLA-F-224ENST00000475996 MRC2Q9UBG0 1479 aa21.82■■□□□ 1.08
HLA-F-224ENST00000475996 URB2Q14146 1524 aaKnown RBP21.81■■□□□ 1.08
HLA-F-224ENST00000475996 THOC2Q8NI27 1593 aaKnown RBP21.79■■□□□ 1.08
HLA-F-224ENST00000475996 CUX1P39880 1505 aa21.79■■□□□ 1.08
HLA-F-224ENST00000475996 SYNJ1O43426 1573 aa21.76■■□□□ 1.07
HLA-F-224ENST00000475996 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
HLA-F-224ENST00000475996 TOPBP1Q92547 1522 aa21.75■■□□□ 1.07
HLA-F-224ENST00000475996 DNMBPQ6XZF7 1577 aa21.75■■□□□ 1.07
HLA-F-224ENST00000475996 WDR62O43379 1518 aa21.72■■□□□ 1.07
HLA-F-224ENST00000475996 TOP2BQ02880 1626 aa21.71■■□□□ 1.07
HLA-F-224ENST00000475996 BIVM-ERCC5R4GMW8 1640 aa21.69■■□□□ 1.06
HLA-F-224ENST00000475996 TRIM41Q8WV44 630 aa21.68■■□□□ 1.06
HLA-F-224ENST00000475996 FGD5Q6ZNL6 1462 aa21.63■■□□□ 1.05
HLA-F-224ENST00000475996 POLA1P09884 1462 aaPredicted RBP21.6■■□□□ 1.05
HLA-F-224ENST00000475996 RAD54L2Q9Y4B4 1467 aa21.54■■□□□ 1.04
HLA-F-224ENST00000475996 CUX2O14529 1486 aa21.54■■□□□ 1.04
HLA-F-224ENST00000475996 SOGA1O94964 1423 aa21.52■■□□□ 1.04
HLA-F-224ENST00000475996 IFT140Q96RY7 1462 aa21.46■■□□□ 1.03
HLA-F-224ENST00000475996 TARBP1Q13395 1621 aaKnown RBP21.46■■□□□ 1.03
HLA-F-224ENST00000475996 ABCA10Q8WWZ4 1543 aa21.42■■□□□ 1.02
HLA-F-224ENST00000475996 WDR97A6NE52 1622 aa21.41■■□□□ 1.02
HLA-F-224ENST00000475996 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
HLA-F-224ENST00000475996 ZNF608Q9ULD9 1512 aaPredicted RBP21.38■■□□□ 1.01
HLA-F-224ENST00000475996 TDRD9Q8NDG6 1382 aaKnown RBP21.37■■□□□ 1.01
HLA-F-224ENST00000475996 RUSC2Q8N2Y8 1516 aa21.34■■□□□ 1.01
HLA-F-224ENST00000475996 AQRO60306 1485 aaKnown RBP eCLIP21.33■■□□□ 1
HLA-F-224ENST00000475996 KIF27Q86VH2 1401 aa21.31■■□□□ 1
HLA-F-224ENST00000475996 FAM9AQ8IZU1 332 aaPredicted RBP21.3■■□□□ 1
HLA-F-224ENST00000475996 EIF4G3O43432 1585 aaKnown RBP21.3■■□□□ 1
HLA-F-224ENST00000475996 ABCA5Q8WWZ7 1642 aa21.29■■□□□ 1
HLA-F-224ENST00000475996 GAPVD1Q14C86 1478 aa21.28■■□□□ 1
HLA-F-224ENST00000475996 PBRM1Q86U86 1689 aa21.22■□□□□ 0.99
HLA-F-224ENST00000475996 EEA1Q15075 1411 aa21.21■□□□□ 0.99
HLA-F-224ENST00000475996 GRIN2BQ13224 1484 aa21.2■□□□□ 0.98
HLA-F-224ENST00000475996 IGF1RP08069 1367 aa21.17■□□□□ 0.98
HLA-F-224ENST00000475996 CSRNP3Q8WYN3 585 aa21.16■□□□□ 0.98
HLA-F-224ENST00000475996 ERICH3Q5RHP9 1530 aa21.16■□□□□ 0.98
HLA-F-224ENST00000475996 SNAPC4Q5SXM2 1469 aa21.14■□□□□ 0.97
HLA-F-224ENST00000475996 CARMIL1Q5VZK9 1371 aa21.07■□□□□ 0.96
HLA-F-224ENST00000475996 CUL7Q14999 1698 aa21.07■□□□□ 0.96
HLA-F-224ENST00000475996 ADAMTS12P58397 1594 aa21.07■□□□□ 0.96
HLA-F-224ENST00000475996 MAGI1Q96QZ7 1491 aaPredicted RBP21.07■□□□□ 0.96
HLA-F-224ENST00000475996 EHMT2Q96KQ7 1210 aa21.05■□□□□ 0.96
HLA-F-224ENST00000475996 FHAD1B1AJZ9 1412 aa21.04■□□□□ 0.96
HLA-F-224ENST00000475996 PRXQ9BXM0 1461 aa21.03■□□□□ 0.96
HLA-F-224ENST00000475996 FBLN2P98095 1184 aa21■□□□□ 0.95
HLA-F-224ENST00000475996 SYNJ2O15056 1496 aa20.99■□□□□ 0.95
HLA-F-224ENST00000475996 RAPGEF2Q9Y4G8 1499 aa20.99■□□□□ 0.95
HLA-F-224ENST00000475996 CHMP7Q8WUX9 453 aaPredicted RBP20.99■□□□□ 0.95
HLA-F-224ENST00000475996 KIF21BO75037 1637 aa20.98■□□□□ 0.95
HLA-F-224ENST00000475996 CHD1O14646 1710 aa20.96■□□□□ 0.95
HLA-F-224ENST00000475996 GRIN2AQ12879 1464 aa20.93■□□□□ 0.94
HLA-F-224ENST00000475996 LOC105371045A0A1W2PR82 267 aa20.92■□□□□ 0.94
HLA-F-224ENST00000475996 GOLGA3Q08378 1498 aa20.92■□□□□ 0.94
HLA-F-224ENST00000475996 UBTFP17480 764 aaKnown RBP20.86■□□□□ 0.93
HLA-F-224ENST00000475996 CEP170Q5SW79 1584 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms