RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 BIVM-ERCC5R4GMW8 1640 aa36.74■■■■□ 3.47
HDAC11-217ENST00000475818 NPM1P06748 294 aaKnown RBP eCLIP36.7■■■■□ 3.47
HDAC11-217ENST00000475818 SUPT5HO00267 1087 aaKnown RBP36.66■■■■□ 3.46
HDAC11-217ENST00000475818 DIP2BQ9P265 1576 aa36.61■■■■□ 3.45
HDAC11-217ENST00000475818 MAPKBP1O60336 1514 aa36.61■■■■□ 3.45
HDAC11-217ENST00000475818 KDM4FA0A1W2PPD8 638 aa36.61■■■■□ 3.45
HDAC11-217ENST00000475818 RUSC2Q8N2Y8 1516 aa36.59■■■■□ 3.45
HDAC11-217ENST00000475818 ADCY10Q96PN6 1610 aa36.55■■■■□ 3.44
HDAC11-217ENST00000475818 KDM6BO15054 1643 aa36.54■■■■□ 3.44
HDAC11-217ENST00000475818 ILDR1Q86SU0 546 aaPredicted RBP36.41■■■■□ 3.42
HDAC11-217ENST00000475818 TSPOAP1O95153 1857 aa36.41■■■■□ 3.42
HDAC11-217ENST00000475818 KIAA0586Q9BVV6 1533 aa36.31■■■■□ 3.4
HDAC11-217ENST00000475818 TTBK1Q5TCY1 1321 aaPredicted RBP36.26■■■■□ 3.39
HDAC11-217ENST00000475818 PTPRGP23470 1445 aa36.19■■■■□ 3.38
HDAC11-217ENST00000475818 IGF1RP08069 1367 aa36.17■■■■□ 3.38
HDAC11-217ENST00000475818 ADGRL1O94910 1474 aa36.11■■■■□ 3.37
HDAC11-217ENST00000475818 ABCC2Q92887 1545 aa36.08■■■■□ 3.37
HDAC11-217ENST00000475818 ASXL2Q76L83 1435 aa36.08■■■■□ 3.37
HDAC11-217ENST00000475818 CUL7Q14999 1698 aa36.07■■■■□ 3.36
HDAC11-217ENST00000475818 KIF27Q86VH2 1401 aa36.05■■■■□ 3.36
HDAC11-217ENST00000475818 PPRC1Q5VV67 1664 aaKnown RBP36.03■■■■□ 3.36
HDAC11-217ENST00000475818 TNIKQ9UKE5 1360 aa36.03■■■■□ 3.36
HDAC11-217ENST00000475818 PLB1Q6P1J6 1458 aa36.02■■■■□ 3.36
HDAC11-217ENST00000475818 GLI2P10070 1586 aa36■■■■□ 3.35
HDAC11-217ENST00000475818 CARMIL2Q6F5E8 1435 aa36■■■■□ 3.35
HDAC11-217ENST00000475818 COL17A1Q9UMD9 1497 aaPredicted RBP35.94■■■■□ 3.34
HDAC11-217ENST00000475818 CARMIL1Q5VZK9 1371 aa35.91■■■■□ 3.34
HDAC11-217ENST00000475818 UHRF1BP1LA0JNW5 1464 aa35.88■■■■□ 3.33
HDAC11-217ENST00000475818 UACAQ9BZF9 1416 aa35.87■■■■□ 3.33
HDAC11-217ENST00000475818 HECW2Q9P2P5 1572 aa35.87■■■■□ 3.33
HDAC11-217ENST00000475818 IQGAP2Q13576 1575 aa35.84■■■■□ 3.33
HDAC11-217ENST00000475818 EPRSP07814 1512 aaKnown RBP35.83■■■■□ 3.33
HDAC11-217ENST00000475818 MAP3K4Q9Y6R4 1608 aa35.78■■■■□ 3.32
HDAC11-217ENST00000475818 TEX14Q8IWB6 1497 aa35.76■■■■□ 3.32
HDAC11-217ENST00000475818 DISP1Q96F81 1524 aa35.76■■■■□ 3.31
HDAC11-217ENST00000475818 KDM5BQ9UGL1 1544 aa35.74■■■■□ 3.31
HDAC11-217ENST00000475818 ZCCHC11Q5TAX3 1644 aaKnown RBP35.68■■■■□ 3.3
HDAC11-217ENST00000475818 UGGT2Q9NYU1 1516 aa35.57■■■■□ 3.28
HDAC11-217ENST00000475818 WDR7Q9Y4E6 1490 aa35.56■■■■□ 3.28
HDAC11-217ENST00000475818 KIAA0556O60303 1618 aa35.54■■■■□ 3.28
HDAC11-217ENST00000475818 RAPGEF2Q9Y4G8 1499 aa35.47■■■■□ 3.27
HDAC11-217ENST00000475818 CD109Q6YHK3 1445 aa35.46■■■■□ 3.27
HDAC11-217ENST00000475818 KCNH8Q96L42 1107 aa35.45■■■■□ 3.27
HDAC11-217ENST00000475818 MAGI3Q5TCQ9 1506 aa35.42■■■■□ 3.26
HDAC11-217ENST00000475818 FBXO41Q8TF61 875 aa35.36■■■■□ 3.25
HDAC11-217ENST00000475818 KIF21BO75037 1637 aa35.35■■■■□ 3.25
HDAC11-217ENST00000475818 CFAP43Q8NDM7 1665 aa35.35■■■■□ 3.25
HDAC11-217ENST00000475818 ABCA8O94911 1581 aa35.26■■■■□ 3.24
HDAC11-217ENST00000475818 GOLGA3Q08378 1498 aa35.21■■■■□ 3.23
HDAC11-217ENST00000475818 ARID3CA6NKF2 412 aa35.17■■■■□ 3.22
HDAC11-217ENST00000475818 CTTNBP2Q8WZ74 1663 aa35.16■■■■□ 3.22
HDAC11-217ENST00000475818 ARAP3Q8WWN8 1544 aa35.16■■■■□ 3.22
HDAC11-217ENST00000475818 PTPRMP28827 1452 aa35.15■■■■□ 3.22
HDAC11-217ENST00000475818 ADAMTSL3P82987 1691 aa35.06■■■■□ 3.2
HDAC11-217ENST00000475818 RAPGEF3O95398 923 aa35.04■■■■□ 3.2
HDAC11-217ENST00000475818 ATP10BO94823 1461 aa34.99■■■■□ 3.19
HDAC11-217ENST00000475818 P3H3Q8IVL6 736 aa34.98■■■■□ 3.19
HDAC11-217ENST00000475818 ARID4BQ4LE39 1312 aaPredicted RBP34.97■■■■□ 3.19
HDAC11-217ENST00000475818 PHLDB1Q86UU1 1377 aa34.96■■■■□ 3.19
HDAC11-217ENST00000475818 PCF11O94913 1555 aaKnown RBP34.95■■■■□ 3.18
HDAC11-217ENST00000475818 ABCA9Q8IUA7 1624 aa34.94■■■■□ 3.18
HDAC11-217ENST00000475818 FAM9AQ8IZU1 332 aaPredicted RBP34.92■■■■□ 3.18
HDAC11-217ENST00000475818 MADDQ8WXG6 1647 aa34.92■■■■□ 3.18
HDAC11-217ENST00000475818 LMTK3Q96Q04 1460 aa34.9■■■■□ 3.18
HDAC11-217ENST00000475818 BCORL1Q5H9F3 1711 aa34.9■■■■□ 3.18
HDAC11-217ENST00000475818 NEO1Q92859 1461 aa34.87■■■■□ 3.17
HDAC11-217ENST00000475818 PRXQ9BXM0 1461 aa34.87■■■■□ 3.17
HDAC11-217ENST00000475818 FRMPD1Q5SYB0 1578 aa34.85■■■■□ 3.17
HDAC11-217ENST00000475818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.81■■■■□ 3.16
HDAC11-217ENST00000475818 HNRNPUL2Q1KMD3 747 aaKnown RBP34.81■■■■□ 3.16
HDAC11-217ENST00000475818 HSPA2P54652 639 aa34.79■■■■□ 3.16
HDAC11-217ENST00000475818 PLPPR3Q6T4P5 718 aa34.79■■■■□ 3.16
HDAC11-217ENST00000475818 RIMS1Q86UR5 1692 aaKnown RBP34.76■■■■□ 3.16
HDAC11-217ENST00000475818 ARHGEF40Q8TER5 1519 aa34.71■■■■□ 3.15
HDAC11-217ENST00000475818 RAPGEF6Q8TEU7 1601 aa34.71■■■■□ 3.15
HDAC11-217ENST00000475818 DENND4BO75064 1496 aaPredicted RBP34.66■■■■□ 3.14
HDAC11-217ENST00000475818 SAMD9Q5K651 1589 aa34.64■■■■□ 3.14
HDAC11-217ENST00000475818 CERKQ8TCT0 537 aa34.62■■■■□ 3.13
HDAC11-217ENST00000475818 NUP153P49790 1475 aaKnown RBP34.61■■■■□ 3.13
HDAC11-217ENST00000475818 RICTORQ6R327 1708 aa34.59■■■■□ 3.13
HDAC11-217ENST00000475818 AKNAQ7Z591 1439 aa34.59■■■■□ 3.13
HDAC11-217ENST00000475818 FHOD3Q2V2M9 1422 aa34.56■■■■□ 3.12
HDAC11-217ENST00000475818 POGZQ7Z3K3 1410 aa34.56■■■■□ 3.12
HDAC11-217ENST00000475818 RANGAP1P46060 587 aaPredicted RBP34.56■■■■□ 3.12
HDAC11-217ENST00000475818 FANCAO15360 1455 aa34.56■■■■□ 3.12
HDAC11-217ENST00000475818 MLECQ14165 292 aa34.55■■■■□ 3.12
HDAC11-217ENST00000475818 YEATS2Q9ULM3 1422 aa34.53■■■■□ 3.12
HDAC11-217ENST00000475818 PLEKHD1A6NEE1 506 aa34.52■■■■□ 3.12
HDAC11-217ENST00000475818 SIGLEC1Q9BZZ2 1709 aa34.5■■■■□ 3.11
HDAC11-217ENST00000475818 ZFYVE16Q7Z3T8 1539 aa34.5■■■■□ 3.11
HDAC11-217ENST00000475818 ZMYM4Q5VZL5 1548 aa34.47■■■■□ 3.11
HDAC11-217ENST00000475818 CFAP74Q9C0B2 1584 aa34.47■■■■□ 3.11
HDAC11-217ENST00000475818 EFCAB5A4FU69 1503 aa34.45■■■■□ 3.11
HDAC11-217ENST00000475818 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.45■■■■□ 3.11
HDAC11-217ENST00000475818 CSRNP3Q8WYN3 585 aa34.42■■■■□ 3.1
HDAC11-217ENST00000475818 TTC37Q6PGP7 1564 aa34.41■■■■□ 3.1
HDAC11-217ENST00000475818 DISP3Q9P2K9 1392 aa34.39■■■■□ 3.1
HDAC11-217ENST00000475818 FER1L4A9Z1Z3 1794 aa34.39■■■■□ 3.1
HDAC11-217ENST00000475818 ILDR2Q71H61 639 aa34.38■■■■□ 3.09
HDAC11-217ENST00000475818 MAGI2Q86UL8 1455 aa34.38■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms