RNA–Protein interactions for RNA: ENST00000475445.1

GGA1-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 2,614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-218ENST00000475445 CUL7Q14999 1698 aa21.36■■□□□ 1.01
GGA1-218ENST00000475445 TIAM1Q13009 1591 aa21.33■■□□□ 1.01
GGA1-218ENST00000475445 CLSPNQ9HAW4 1339 aa21.33■■□□□ 1.01
GGA1-218ENST00000475445 ZNF316A6NFI3 1004 aaPredicted RBP21.33■■□□□ 1
GGA1-218ENST00000475445 RAD54L2Q9Y4B4 1467 aa21.31■■□□□ 1
GGA1-218ENST00000475445 WDR97A6NE52 1622 aa21.31■■□□□ 1
GGA1-218ENST00000475445 FHAD1B1AJZ9 1412 aa21.29■■□□□ 1
GGA1-218ENST00000475445 CCNB3Q8WWL7 1395 aa21.27■■□□□ 1
GGA1-218ENST00000475445 EFCAB5A4FU69 1503 aa21.26■□□□□ 0.99
GGA1-218ENST00000475445 CFAP43Q8NDM7 1665 aa21.26■□□□□ 0.99
GGA1-218ENST00000475445 CTTNBP2Q8WZ74 1663 aa21.26■□□□□ 0.99
GGA1-218ENST00000475445 DHX57Q6P158 1386 aaKnown RBP21.24■□□□□ 0.99
GGA1-218ENST00000475445 PRKCSHP14314 528 aaPredicted RBP21.22■□□□□ 0.99
GGA1-218ENST00000475445 LRRC9Q6ZRR7 1453 aa21.21■□□□□ 0.99
GGA1-218ENST00000475445 BCL11AQ9H165 835 aa21.21■□□□□ 0.99
GGA1-218ENST00000475445 PCF11O94913 1555 aaKnown RBP21.21■□□□□ 0.99
GGA1-218ENST00000475445 ABCA5Q8WWZ7 1642 aa21.19■□□□□ 0.98
GGA1-218ENST00000475445 AQRO60306 1485 aaKnown RBP eCLIP21.16■□□□□ 0.981e-7■■■■■ 34.7
GGA1-218ENST00000475445 FYCO1Q9BQS8 1478 aa21.16■□□□□ 0.98
GGA1-218ENST00000475445 ACIN1Q9UKV3 1341 aaKnown RBP21.14■□□□□ 0.97
GGA1-218ENST00000475445 CASKIN1Q8WXD9 1431 aa21.11■□□□□ 0.97
GGA1-218ENST00000475445 FHOD3Q2V2M9 1422 aa21.1■□□□□ 0.97
GGA1-218ENST00000475445 GAPVD1Q14C86 1478 aa21.08■□□□□ 0.97
GGA1-218ENST00000475445 TDRD9Q8NDG6 1382 aaKnown RBP21.07■□□□□ 0.96
GGA1-218ENST00000475445 CENPBP07199 599 aaPredicted RBP21.07■□□□□ 0.96
GGA1-218ENST00000475445 TARBP1Q13395 1621 aaKnown RBP21.06■□□□□ 0.96
GGA1-218ENST00000475445 FMN1Q68DA7 1419 aa21.06■□□□□ 0.96
GGA1-218ENST00000475445 SAMD9Q5K651 1589 aa21.06■□□□□ 0.96
GGA1-218ENST00000475445 PHLDB1Q86UU1 1377 aa21.06■□□□□ 0.96
GGA1-218ENST00000475445 P3H3Q8IVL6 736 aa21.02■□□□□ 0.96
GGA1-218ENST00000475445 RAB3GAP2Q9H2M9 1393 aa21■□□□□ 0.95
GGA1-218ENST00000475445 SNAPC4Q5SXM2 1469 aa21■□□□□ 0.95
GGA1-218ENST00000475445 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.99■□□□□ 0.95
GGA1-218ENST00000475445 NEUROD1Q13562 356 aa20.99■□□□□ 0.95
GGA1-218ENST00000475445 SETD5Q9C0A6 1442 aa20.99■□□□□ 0.95
GGA1-218ENST00000475445 ITGAEP38570 1179 aa20.97■□□□□ 0.95
GGA1-218ENST00000475445 IFT140Q96RY7 1462 aa20.97■□□□□ 0.95
GGA1-218ENST00000475445 PBRM1Q86U86 1689 aa20.95■□□□□ 0.94
GGA1-218ENST00000475445 GTF3C3Q9Y5Q9 886 aa20.93■□□□□ 0.94
GGA1-218ENST00000475445 MAPKBP1O60336 1514 aa20.93■□□□□ 0.94
GGA1-218ENST00000475445 ERICH6Q7L0X2 663 aa20.93■□□□□ 0.94
GGA1-218ENST00000475445 ATP1B4Q9UN42 357 aaPredicted RBP20.92■□□□□ 0.94
GGA1-218ENST00000475445 ZNF608Q9ULD9 1512 aaPredicted RBP20.91■□□□□ 0.94
GGA1-218ENST00000475445 LRRIQ1Q96JM4 1722 aa20.9■□□□□ 0.94
GGA1-218ENST00000475445 GRIN2BQ13224 1484 aa20.9■□□□□ 0.94
GGA1-218ENST00000475445 FAM50AQ14320 339 aaKnown RBP20.89■□□□□ 0.93
GGA1-218ENST00000475445 MIER1Q8N108 512 aa20.89■□□□□ 0.93
GGA1-218ENST00000475445 EIF4G3O43432 1585 aaKnown RBP20.89■□□□□ 0.93
GGA1-218ENST00000475445 FGD6Q6ZV73 1430 aa20.86■□□□□ 0.93
GGA1-218ENST00000475445 ADAMTS12P58397 1594 aa20.86■□□□□ 0.93
GGA1-218ENST00000475445 MTUS2Q5JR59 1369 aa20.84■□□□□ 0.93
GGA1-218ENST00000475445 EHBP1L1Q8N3D4 1523 aa20.84■□□□□ 0.93
GGA1-218ENST00000475445 SUPT6HQ7KZ85 1726 aaKnown RBP20.83■□□□□ 0.93
GGA1-218ENST00000475445 IQGAP2Q13576 1575 aa20.81■□□□□ 0.92
GGA1-218ENST00000475445 CCDC18Q5T9S5 1454 aa20.8■□□□□ 0.92
GGA1-218ENST00000475445 NCOA2Q15596 1464 aa20.78■□□□□ 0.92
GGA1-218ENST00000475445 HECW1Q76N89 1606 aa20.78■□□□□ 0.92
GGA1-218ENST00000475445 MYOM3Q5VTT5 1437 aa20.76■□□□□ 0.91
GGA1-218ENST00000475445 ARHGEF11O15085 1522 aa20.75■□□□□ 0.91
GGA1-218ENST00000475445 TIMELESSQ9UNS1 1208 aa20.74■□□□□ 0.91
GGA1-218ENST00000475445 UGGT2Q9NYU1 1516 aa20.74■□□□□ 0.91
GGA1-218ENST00000475445 HFM1A2PYH4 1435 aa20.71■□□□□ 0.91
GGA1-218ENST00000475445 PTPN23Q9H3S7 1636 aa20.7■□□□□ 0.9
GGA1-218ENST00000475445 YTHDC1Q96MU7 727 aaKnown RBP20.7■□□□□ 0.9
GGA1-218ENST00000475445 MAGI3Q5TCQ9 1506 aa20.68■□□□□ 0.9
GGA1-218ENST00000475445 EPRSP07814 1512 aaKnown RBP20.65■□□□□ 0.9
GGA1-218ENST00000475445 TCOF1Q13428 1488 aaKnown RBP20.65■□□□□ 0.9
GGA1-218ENST00000475445 PTPRKQ15262 1439 aa20.65■□□□□ 0.9
GGA1-218ENST00000475445 UACAQ9BZF9 1416 aa20.64■□□□□ 0.9
GGA1-218ENST00000475445 CHD1O14646 1710 aa20.63■□□□□ 0.89
GGA1-218ENST00000475445 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
GGA1-218ENST00000475445 NAIPQ13075 1403 aa20.62■□□□□ 0.89
GGA1-218ENST00000475445 SIN3AQ96ST3 1273 aa20.61■□□□□ 0.89
GGA1-218ENST00000475445 KIAA0586Q9BVV6 1533 aa20.61■□□□□ 0.89
GGA1-218ENST00000475445 GCC2Q8IWJ2 1684 aa20.6■□□□□ 0.89
GGA1-218ENST00000475445 KIAA0556O60303 1618 aa20.59■□□□□ 0.89
GGA1-218ENST00000475445 FBLN2P98095 1184 aa20.58■□□□□ 0.89
GGA1-218ENST00000475445 MIA2Q96PC5 1412 aa20.58■□□□□ 0.88
GGA1-218ENST00000475445 GRIN2AQ12879 1464 aa20.58■□□□□ 0.88
GGA1-218ENST00000475445 CHMP7Q8WUX9 453 aaPredicted RBP20.57■□□□□ 0.88
GGA1-218ENST00000475445 AKNAQ7Z591 1439 aa20.57■□□□□ 0.88
GGA1-218ENST00000475445 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
GGA1-218ENST00000475445 CDK13Q14004 1512 aaKnown RBP20.56■□□□□ 0.88
GGA1-218ENST00000475445 ANP32EQ9BTT0 268 aa20.56■□□□□ 0.88
GGA1-218ENST00000475445 DISP1Q96F81 1524 aa20.54■□□□□ 0.88
GGA1-218ENST00000475445 PPP1R15AO75807 674 aaPredicted RBP20.53■□□□□ 0.88
GGA1-218ENST00000475445 DNAJC5Q9H3Z4 198 aa20.52■□□□□ 0.88
GGA1-218ENST00000475445 RAPGEF6Q8TEU7 1601 aa20.5■□□□□ 0.87
GGA1-218ENST00000475445 TONSLQ96HA7 1378 aa20.49■□□□□ 0.87
GGA1-218ENST00000475445 CEP170Q5SW79 1584 aa20.46■□□□□ 0.87
GGA1-218ENST00000475445 NUP153P49790 1475 aaKnown RBP20.45■□□□□ 0.86
GGA1-218ENST00000475445 DNMT1P26358 1616 aaKnown RBP20.41■□□□□ 0.86
GGA1-218ENST00000475445 OSCARQ8IYS5 282 aa20.4■□□□□ 0.86
GGA1-218ENST00000475445 NUP160Q12769 1436 aa20.39■□□□□ 0.85
GGA1-218ENST00000475445 ROCK1Q13464 1354 aa20.39■□□□□ 0.85
GGA1-218ENST00000475445 KDM5BQ9UGL1 1544 aa20.38■□□□□ 0.85
GGA1-218ENST00000475445 RRP7BPQ9NSQ0 103 aa20.38■□□□□ 0.85
GGA1-218ENST00000475445 KDM6BO15054 1643 aa20.38■□□□□ 0.85
GGA1-218ENST00000475445 CDK11AQ9UQ88 783 aaPredicted RBP20.38■□□□□ 0.85
GGA1-218ENST00000475445 CLASP1Q7Z460 1538 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms