RNA–Protein interactions for RNA: ENST00000475445.1

GGA1-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 2,614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-218ENST00000475445 NISCHQ9Y2I1 1504 aa30.42■■■□□ 2.46
GGA1-218ENST00000475445 CCDC180Q9P1Z9 1646 aa26.15■■□□□ 1.78
GGA1-218ENST00000475445 ZCCHC6Q5VYS8 1495 aaKnown RBP25.72■■□□□ 1.71
GGA1-218ENST00000475445 SHROOM4Q9ULL8 1493 aa25.42■■□□□ 1.66
GGA1-218ENST00000475445 ABCC9O60706 1549 aa25.14■■□□□ 1.62
GGA1-218ENST00000475445 DCAF1Q9Y4B6 1507 aa25.14■■□□□ 1.61
GGA1-218ENST00000475445 DCAF8L2P0C7V8 631 aa24.89■■□□□ 1.57
GGA1-218ENST00000475445 SUPT5HO00267 1087 aaKnown RBP24.85■■□□□ 1.57
GGA1-218ENST00000475445 MYO15BQ96JP2 1530 aa24.52■■□□□ 1.52
GGA1-218ENST00000475445 RB1CC1Q8TDY2 1594 aa24.27■■□□□ 1.48
GGA1-218ENST00000475445 NACADO15069 1562 aa24.26■■□□□ 1.47
GGA1-218ENST00000475445 CHIC1Q5VXU3 224 aa24.22■■□□□ 1.47
GGA1-218ENST00000475445 SCRIBQ14160 1630 aa24.19■■□□□ 1.46
GGA1-218ENST00000475445 RSF1Q96T23 1441 aaPredicted RBP23.91■■□□□ 1.42
GGA1-218ENST00000475445 UNC13AQ9UPW8 1703 aa23.87■■□□□ 1.41
GGA1-218ENST00000475445 PELP1Q8IZL8 1130 aaKnown RBP23.65■■□□□ 1.38
GGA1-218ENST00000475445 BICRAQ9NZM4 1560 aa23.59■■□□□ 1.37
GGA1-218ENST00000475445 CECR2Q9BXF3 1484 aa23.58■■□□□ 1.37
GGA1-218ENST00000475445 MROH2BQ7Z745 1585 aa23.55■■□□□ 1.36
GGA1-218ENST00000475445 PABPN1Q86U42 306 aaKnown RBP eCLIP23.43■■□□□ 1.348e-8■■□□□ 13.6
GGA1-218ENST00000475445 WIZO95785 1651 aa23.43■■□□□ 1.34
GGA1-218ENST00000475445 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
GGA1-218ENST00000475445 LOC105371045A0A1W2PR82 267 aa23.33■■□□□ 1.33
GGA1-218ENST00000475445 TRIM41Q8WV44 630 aa23.29■■□□□ 1.32
GGA1-218ENST00000475445 SMARCA4P51532 1647 aa23.23■■□□□ 1.31
GGA1-218ENST00000475445 TOP2AP11388 1531 aaKnown RBP23.18■■□□□ 1.3
GGA1-218ENST00000475445 HRCP23327 699 aa23.17■■□□□ 1.3
GGA1-218ENST00000475445 EIF4G1Q04637 1599 aaKnown RBP23.16■■□□□ 1.3
GGA1-218ENST00000475445 PCGF6Q9BYE7 350 aa23.15■■□□□ 1.3
GGA1-218ENST00000475445 MYT1Q01538 1121 aa23.15■■□□□ 1.3
GGA1-218ENST00000475445 SMARCA2P51531 1590 aa22.99■■□□□ 1.27
GGA1-218ENST00000475445 CCDC88BA6NC98 1476 aa22.95■■□□□ 1.26
GGA1-218ENST00000475445 TRIM26Q12899 539 aaPredicted RBP22.94■■□□□ 1.26
GGA1-218ENST00000475445 DNAJC5BQ9UF47 199 aa22.93■■□□□ 1.26
GGA1-218ENST00000475445 FAM9AQ8IZU1 332 aaPredicted RBP22.91■■□□□ 1.26
GGA1-218ENST00000475445 PEG3Q9GZU2 1588 aa22.89■■□□□ 1.26
GGA1-218ENST00000475445 CC2D2AQ9P2K1 1620 aa22.81■■□□□ 1.24
GGA1-218ENST00000475445 ABCC8Q09428 1581 aa22.76■■□□□ 1.23
GGA1-218ENST00000475445 ATAD2BQ9ULI0 1458 aa22.62■■□□□ 1.21
GGA1-218ENST00000475445 EEA1Q15075 1411 aa22.6■■□□□ 1.21
GGA1-218ENST00000475445 EHMT2Q96KQ7 1210 aa22.57■■□□□ 1.2
GGA1-218ENST00000475445 BAZ1BQ9UIG0 1483 aaKnown RBP22.55■■□□□ 1.2
GGA1-218ENST00000475445 PPARGC1BQ86YN6 1023 aaKnown RBP22.49■■□□□ 1.19
GGA1-218ENST00000475445 WRNQ14191 1432 aaPredicted RBP eCLIP22.49■■□□□ 1.19
GGA1-218ENST00000475445 SOGA1O94964 1423 aa22.48■■□□□ 1.19
GGA1-218ENST00000475445 ZEB1P37275 1124 aaPredicted RBP22.46■■□□□ 1.19
GGA1-218ENST00000475445 TNIKQ9UKE5 1360 aa22.42■■□□□ 1.18
GGA1-218ENST00000475445 NCAPD3P42695 1498 aa22.39■■□□□ 1.17
GGA1-218ENST00000475445 SYNJ1O43426 1573 aa22.39■■□□□ 1.17
GGA1-218ENST00000475445 CSRNP3Q8WYN3 585 aa22.38■■□□□ 1.17
GGA1-218ENST00000475445 CEP162Q5TB80 1403 aa22.37■■□□□ 1.17
GGA1-218ENST00000475445 HMGXB3Q12766 1538 aa22.36■■□□□ 1.17
GGA1-218ENST00000475445 RUSC2Q8N2Y8 1516 aa22.36■■□□□ 1.17
GGA1-218ENST00000475445 GOLGA3Q08378 1498 aa22.34■■□□□ 1.17
GGA1-218ENST00000475445 KIF21BO75037 1637 aa22.29■■□□□ 1.16
GGA1-218ENST00000475445 CEP164Q9UPV0 1460 aa22.25■■□□□ 1.15
GGA1-218ENST00000475445 TOP2BQ02880 1626 aa22.23■■□□□ 1.15
GGA1-218ENST00000475445 BIVM-ERCC5R4GMW8 1640 aa22.2■■□□□ 1.14
GGA1-218ENST00000475445 UBTFP17480 764 aaKnown RBP22.18■■□□□ 1.14
GGA1-218ENST00000475445 TTBK1Q5TCY1 1321 aaPredicted RBP22.1■■□□□ 1.13
GGA1-218ENST00000475445 PRDM2Q13029 1718 aa22.02■■□□□ 1.12
GGA1-218ENST00000475445 CFTRP13569 1480 aa22.01■■□□□ 1.11
GGA1-218ENST00000475445 CLIP1P30622 1438 aa22■■□□□ 1.11
GGA1-218ENST00000475445 RAPGEF2Q9Y4G8 1499 aa21.99■■□□□ 1.11
GGA1-218ENST00000475445 ERICH3Q5RHP9 1530 aa21.97■■□□□ 1.11
GGA1-218ENST00000475445 CUX1P39880 1505 aa21.97■■□□□ 1.11
GGA1-218ENST00000475445 VPS8Q8N3P4 1428 aa21.93■■□□□ 1.1
GGA1-218ENST00000475445 SCAF1Q9H7N4 1312 aaKnown RBP21.91■■□□□ 1.1
GGA1-218ENST00000475445 PRXQ9BXM0 1461 aa21.9■■□□□ 1.1
GGA1-218ENST00000475445 CCER1Q8TC90 406 aaPredicted RBP21.9■■□□□ 1.1
GGA1-218ENST00000475445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.89■■□□□ 1.09
GGA1-218ENST00000475445 CADPSQ9ULU8 1353 aa21.86■■□□□ 1.09
GGA1-218ENST00000475445 KIF27Q86VH2 1401 aa21.84■■□□□ 1.09
GGA1-218ENST00000475445 NESP48681 1621 aa21.82■■□□□ 1.08
GGA1-218ENST00000475445 LAMC3Q9Y6N6 1575 aa21.79■■□□□ 1.08
GGA1-218ENST00000475445 APLP2Q06481 763 aa21.73■■□□□ 1.07
GGA1-218ENST00000475445 ARAP1Q96P48 1450 aa21.69■■□□□ 1.06
GGA1-218ENST00000475445 KIF21AQ7Z4S6 1674 aa21.66■■□□□ 1.06
GGA1-218ENST00000475445 FANCD2Q9BXW9 1451 aa21.64■■□□□ 1.05
GGA1-218ENST00000475445 ERCC6Q03468 1493 aa21.63■■□□□ 1.05
GGA1-218ENST00000475445 CUX2O14529 1486 aa21.61■■□□□ 1.05
GGA1-218ENST00000475445 FGD5Q6ZNL6 1462 aa21.59■■□□□ 1.05
GGA1-218ENST00000475445 RANGAP1P46060 587 aaPredicted RBP21.59■■□□□ 1.05
GGA1-218ENST00000475445 THOC2Q8NI27 1593 aaKnown RBP21.56■■□□□ 1.04
GGA1-218ENST00000475445 IGF1RP08069 1367 aa21.55■■□□□ 1.04
GGA1-218ENST00000475445 PDS5BQ9NTI5 1447 aa21.55■■□□□ 1.04
GGA1-218ENST00000475445 ARHGAP35Q9NRY4 1499 aa21.53■■□□□ 1.04
GGA1-218ENST00000475445 HNRNPUL2Q1KMD3 747 aaKnown RBP21.51■■□□□ 1.03
GGA1-218ENST00000475445 DNMBPQ6XZF7 1577 aa21.51■■□□□ 1.03
GGA1-218ENST00000475445 CARMIL1Q5VZK9 1371 aa21.47■■□□□ 1.03
GGA1-218ENST00000475445 RRBP1Q9P2E9 1410 aaKnown RBP21.42■■□□□ 1.02
GGA1-218ENST00000475445 ABCA10Q8WWZ4 1543 aa21.41■■□□□ 1.02
GGA1-218ENST00000475445 MAP3K1Q13233 1512 aa21.41■■□□□ 1.02
GGA1-218ENST00000475445 TOPBP1Q92547 1522 aa21.41■■□□□ 1.02
GGA1-218ENST00000475445 MRC2Q9UBG0 1479 aa21.39■■□□□ 1.01
GGA1-218ENST00000475445 KANK4Q5T7N3 995 aaPredicted RBP21.39■■□□□ 1.01
GGA1-218ENST00000475445 DIEXFQ68CQ4 756 aaKnown RBP21.37■■□□□ 1.01
GGA1-218ENST00000475445 WDR62O43379 1518 aa21.37■■□□□ 1.01
GGA1-218ENST00000475445 URB2Q14146 1524 aaKnown RBP21.36■■□□□ 1.01
GGA1-218ENST00000475445 POLA1P09884 1462 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms