RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 JPH4Q96JJ6 628 aa29.88■■■□□ 2.37
SNRPB-203ENST00000474384 KIF21BO75037 1637 aa29.88■■■□□ 2.37
SNRPB-203ENST00000474384 RIMBP3CA6NJZ7 1639 aa29.85■■■□□ 2.37
SNRPB-203ENST00000474384 RIMBP3BA6NNM3 1639 aa29.85■■■□□ 2.37
SNRPB-203ENST00000474384 RIMBP3Q9UFD9 1639 aa29.85■■■□□ 2.37
SNRPB-203ENST00000474384 EHMT2Q96KQ7 1210 aa29.85■■■□□ 2.37
SNRPB-203ENST00000474384 SHROOM2Q13796 1616 aa29.85■■■□□ 2.37
SNRPB-203ENST00000474384 IQGAP2Q13576 1575 aa29.81■■■□□ 2.36
SNRPB-203ENST00000474384 CTTNBP2Q8WZ74 1663 aa29.79■■■□□ 2.36
SNRPB-203ENST00000474384 PRG4Q92954 1404 aaPredicted RBP29.78■■■□□ 2.36
SNRPB-203ENST00000474384 ERCC6L2Q5T890 1561 aa29.77■■■□□ 2.36
SNRPB-203ENST00000474384 GOLGA3Q08378 1498 aa29.74■■■□□ 2.35
SNRPB-203ENST00000474384 UBTFP17480 764 aaKnown RBP29.71■■■□□ 2.35
SNRPB-203ENST00000474384 ARAP1Q96P48 1450 aa29.67■■■□□ 2.34
SNRPB-203ENST00000474384 UGGT2Q9NYU1 1516 aa29.66■■■□□ 2.34
SNRPB-203ENST00000474384 CYB5RLQ6IPT4 315 aa29.65■■■□□ 2.34
SNRPB-203ENST00000474384 CARMIL2Q6F5E8 1435 aa29.61■■■□□ 2.33
SNRPB-203ENST00000474384 DISP1Q96F81 1524 aa29.59■■■□□ 2.33
SNRPB-203ENST00000474384 RANGAP1P46060 587 aaPredicted RBP29.58■■■□□ 2.33
SNRPB-203ENST00000474384 KIAA0556O60303 1618 aa29.52■■■□□ 2.32
SNRPB-203ENST00000474384 TTBK1Q5TCY1 1321 aaPredicted RBP29.51■■■□□ 2.32
SNRPB-203ENST00000474384 TNIKQ9UKE5 1360 aa29.5■■■□□ 2.31
SNRPB-203ENST00000474384 LOC105371045A0A1W2PR82 267 aa29.48■■■□□ 2.31
SNRPB-203ENST00000474384 P3H3Q8IVL6 736 aa29.48■■■□□ 2.31
SNRPB-203ENST00000474384 PTPRGP23470 1445 aa29.46■■■□□ 2.31
SNRPB-203ENST00000474384 SAMD9Q5K651 1589 aa29.43■■■□□ 2.3
SNRPB-203ENST00000474384 EFCAB5A4FU69 1503 aa29.35■■■□□ 2.29
SNRPB-203ENST00000474384 FHOD3Q2V2M9 1422 aa29.32■■■□□ 2.28
SNRPB-203ENST00000474384 ARHGAP35Q9NRY4 1499 aa29.29■■■□□ 2.28
SNRPB-203ENST00000474384 ADCY10Q96PN6 1610 aa29.26■■■□□ 2.27
SNRPB-203ENST00000474384 UACAQ9BZF9 1416 aa29.26■■■□□ 2.27
SNRPB-203ENST00000474384 CLIP1P30622 1438 aa29.24■■■□□ 2.27
SNRPB-203ENST00000474384 PLB1Q6P1J6 1458 aa29.23■■■□□ 2.27
SNRPB-203ENST00000474384 UHRF1BP1LA0JNW5 1464 aa29.2■■■□□ 2.26
SNRPB-203ENST00000474384 ABCC2Q92887 1545 aa29.19■■■□□ 2.26
SNRPB-203ENST00000474384 CEP162Q5TB80 1403 aa29.19■■■□□ 2.26
SNRPB-203ENST00000474384 ABCA8O94911 1581 aa29.18■■■□□ 2.26
SNRPB-203ENST00000474384 NPM1P06748 294 aaKnown RBP eCLIP29.17■■■□□ 2.26
SNRPB-203ENST00000474384 FMN1Q68DA7 1419 aa29.1■■■□□ 2.25
SNRPB-203ENST00000474384 RAPGEF6Q8TEU7 1601 aa29.09■■■□□ 2.25
SNRPB-203ENST00000474384 KDM5BQ9UGL1 1544 aa29.06■■■□□ 2.24
SNRPB-203ENST00000474384 ARID3CA6NKF2 412 aa29.06■■■□□ 2.24
SNRPB-203ENST00000474384 ZCCHC11Q5TAX3 1644 aaKnown RBP29.02■■■□□ 2.24
SNRPB-203ENST00000474384 ATP1B4Q9UN42 357 aaPredicted RBP29.01■■■□□ 2.23
SNRPB-203ENST00000474384 NUP153P49790 1475 aaKnown RBP29■■■□□ 2.23
SNRPB-203ENST00000474384 MAPKBP1O60336 1514 aa28.98■■■□□ 2.23
SNRPB-203ENST00000474384 ATP10BO94823 1461 aa28.97■■■□□ 2.23
SNRPB-203ENST00000474384 TRHP20396 242 aaPredicted RBP28.95■■■□□ 2.22
SNRPB-203ENST00000474384 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.93■■■□□ 2.22
SNRPB-203ENST00000474384 HNRNPUL2Q1KMD3 747 aaKnown RBP28.93■■■□□ 2.22
SNRPB-203ENST00000474384 ASXL2Q76L83 1435 aa28.93■■■□□ 2.22
SNRPB-203ENST00000474384 CASKIN1Q8WXD9 1431 aa28.92■■■□□ 2.22
SNRPB-203ENST00000474384 PCF11O94913 1555 aaKnown RBP28.91■■■□□ 2.22
SNRPB-203ENST00000474384 HECW1Q76N89 1606 aa28.91■■■□□ 2.22
SNRPB-203ENST00000474384 EPRSP07814 1512 aaKnown RBP28.85■■■□□ 2.21
SNRPB-203ENST00000474384 FYCO1Q9BQS8 1478 aa28.85■■■□□ 2.21
SNRPB-203ENST00000474384 CDK13Q14004 1512 aaKnown RBP28.84■■■□□ 2.21
SNRPB-203ENST00000474384 ABCC10Q5T3U5 1492 aa28.83■■■□□ 2.21
SNRPB-203ENST00000474384 WDR7Q9Y4E6 1490 aa28.82■■■□□ 2.2
SNRPB-203ENST00000474384 LRRIQ1Q96JM4 1722 aa28.81■■■□□ 2.2
SNRPB-203ENST00000474384 FAM69CQ0P6D2 419 aa28.81■■■□□ 2.2
SNRPB-203ENST00000474384 VPS8Q8N3P4 1428 aa28.79■■■□□ 2.2
SNRPB-203ENST00000474384 KCNH8Q96L42 1107 aa28.79■■■□□ 2.2
SNRPB-203ENST00000474384 DIP2BQ9P265 1576 aa28.78■■■□□ 2.2
SNRPB-203ENST00000474384 KIF13AQ9H1H9 1805 aa28.78■■■□□ 2.2
SNRPB-203ENST00000474384 PLEKHD1A6NEE1 506 aa28.77■■■□□ 2.2
SNRPB-203ENST00000474384 CCDC18Q5T9S5 1454 aa28.74■■■□□ 2.19
SNRPB-203ENST00000474384 CDK11AQ9UQ88 783 aaPredicted RBP28.71■■■□□ 2.19
SNRPB-203ENST00000474384 GLI2P10070 1586 aa28.68■■■□□ 2.18
SNRPB-203ENST00000474384 TROQ12816 1431 aaPredicted RBP28.6■■■□□ 2.17
SNRPB-203ENST00000474384 MAGI3Q5TCQ9 1506 aa28.59■■■□□ 2.17
SNRPB-203ENST00000474384 TSPOAP1O95153 1857 aa28.58■■■□□ 2.17
SNRPB-203ENST00000474384 MAP3K4Q9Y6R4 1608 aa28.58■■■□□ 2.17
SNRPB-203ENST00000474384 CFAP43Q8NDM7 1665 aa28.54■■■□□ 2.16
SNRPB-203ENST00000474384 ABCA9Q8IUA7 1624 aa28.54■■■□□ 2.16
SNRPB-203ENST00000474384 CD109Q6YHK3 1445 aa28.54■■■□□ 2.16
SNRPB-203ENST00000474384 TIAM1Q13009 1591 aa28.54■■■□□ 2.16
SNRPB-203ENST00000474384 KIF14Q15058 1648 aa28.52■■■□□ 2.16
SNRPB-203ENST00000474384 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.52■■■□□ 2.161e-13■■■■□ 25.6
SNRPB-203ENST00000474384 MTUS2Q5JR59 1369 aa28.51■■■□□ 2.16
SNRPB-203ENST00000474384 APLP2Q06481 763 aa28.5■■■□□ 2.15
SNRPB-203ENST00000474384 PPRC1Q5VV67 1664 aaKnown RBP28.48■■■□□ 2.15
SNRPB-203ENST00000474384 TTC37Q6PGP7 1564 aa28.48■■■□□ 2.15
SNRPB-203ENST00000474384 MAP3K1Q13233 1512 aa28.48■■■□□ 2.15
SNRPB-203ENST00000474384 EHBP1L1Q8N3D4 1523 aa28.44■■■□□ 2.14
SNRPB-203ENST00000474384 KANK4Q5T7N3 995 aaPredicted RBP28.44■■■□□ 2.14
SNRPB-203ENST00000474384 LRRC9Q6ZRR7 1453 aa28.42■■■□□ 2.14
SNRPB-203ENST00000474384 TEX14Q8IWB6 1497 aa28.4■■■□□ 2.14
SNRPB-203ENST00000474384 PLCH2O75038 1416 aa28.36■■■□□ 2.13
SNRPB-203ENST00000474384 MYO5CQ9NQX4 1742 aa28.35■■■□□ 2.13
SNRPB-203ENST00000474384 SUPT6HQ7KZ85 1726 aaKnown RBP28.32■■■□□ 2.12
SNRPB-203ENST00000474384 NCOA2Q15596 1464 aa28.31■■■□□ 2.12
SNRPB-203ENST00000474384 FANCAO15360 1455 aa28.29■■■□□ 2.12
SNRPB-203ENST00000474384 CCNB3Q8WWL7 1395 aa28.29■■■□□ 2.12
SNRPB-203ENST00000474384 EFCAB2Q5VUJ9 269 aa28.28■■■□□ 2.12
SNRPB-203ENST00000474384 CDC42BPAQ5VT25 1732 aa28.28■■■□□ 2.12
SNRPB-203ENST00000474384 GPATCH8Q9UKJ3 1502 aaKnown RBP28.28■■■□□ 2.12
SNRPB-203ENST00000474384 NEO1Q92859 1461 aa28.27■■■□□ 2.12
SNRPB-203ENST00000474384 CDC42BPBQ9Y5S2 1711 aa28.27■■■□□ 2.12
SNRPB-203ENST00000474384 ARHGAP5Q13017 1502 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms