RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 FAM69CQ0P6D2 419 aa36.08■■■■□ 3.37
APP-215ENST00000474136 RUSC2Q8N2Y8 1516 aa36.03■■■■□ 3.36
APP-215ENST00000474136 ABCC10Q5T3U5 1492 aa36.02■■■■□ 3.36
APP-215ENST00000474136 NPM1P06748 294 aaKnown RBP eCLIP35.99■■■■□ 3.35
APP-215ENST00000474136 MAPKBP1O60336 1514 aa35.92■■■■□ 3.34
APP-215ENST00000474136 ADCY10Q96PN6 1610 aa35.9■■■■□ 3.34
APP-215ENST00000474136 DIP2BQ9P265 1576 aa35.88■■■■□ 3.33
APP-215ENST00000474136 KIAA0586Q9BVV6 1533 aa35.81■■■■□ 3.32
APP-215ENST00000474136 IGF1RP08069 1367 aa35.79■■■■□ 3.32
APP-215ENST00000474136 KDM4FA0A1W2PPD8 638 aa35.74■■■■□ 3.31
APP-215ENST00000474136 KDM6BO15054 1643 aa35.71■■■■□ 3.31
APP-215ENST00000474136 KIF27Q86VH2 1401 aa35.67■■■■□ 3.3
APP-215ENST00000474136 TTBK1Q5TCY1 1321 aaPredicted RBP35.66■■■■□ 3.3
APP-215ENST00000474136 TSPOAP1O95153 1857 aa35.64■■■■□ 3.3
APP-215ENST00000474136 PTPRGP23470 1445 aa35.63■■■■□ 3.29
APP-215ENST00000474136 CUL7Q14999 1698 aa35.61■■■■□ 3.29
APP-215ENST00000474136 CARMIL1Q5VZK9 1371 aa35.52■■■■□ 3.28
APP-215ENST00000474136 TNIKQ9UKE5 1360 aa35.49■■■■□ 3.27
APP-215ENST00000474136 ABCC2Q92887 1545 aa35.48■■■■□ 3.27
APP-215ENST00000474136 CARMIL2Q6F5E8 1435 aa35.45■■■■□ 3.27
APP-215ENST00000474136 ASXL2Q76L83 1435 aa35.45■■■■□ 3.27
APP-215ENST00000474136 PLB1Q6P1J6 1458 aa35.39■■■■□ 3.26
APP-215ENST00000474136 PPRC1Q5VV67 1664 aaKnown RBP35.36■■■■□ 3.25
APP-215ENST00000474136 GLI2P10070 1586 aa35.34■■■■□ 3.25
APP-215ENST00000474136 IQGAP2Q13576 1575 aa35.34■■■■□ 3.25
APP-215ENST00000474136 UHRF1BP1LA0JNW5 1464 aa35.33■■■■□ 3.25
APP-215ENST00000474136 UACAQ9BZF9 1416 aa35.33■■■■□ 3.25
APP-215ENST00000474136 DISP1Q96F81 1524 aa35.29■■■■□ 3.24
APP-215ENST00000474136 COL17A1Q9UMD9 1497 aaPredicted RBP35.27■■■■□ 3.24
APP-215ENST00000474136 ADGRL1O94910 1474 aa35.25■■■■□ 3.23
APP-215ENST00000474136 ILDR1Q86SU0 546 aaPredicted RBP35.24■■■■□ 3.23
APP-215ENST00000474136 EPRSP07814 1512 aaKnown RBP35.22■■■■□ 3.23
APP-215ENST00000474136 KDM5BQ9UGL1 1544 aa35.19■■■■□ 3.22
APP-215ENST00000474136 UGGT2Q9NYU1 1516 aa35.13■■■■□ 3.21
APP-215ENST00000474136 MAP3K4Q9Y6R4 1608 aa35.12■■■■□ 3.21
APP-215ENST00000474136 RAPGEF2Q9Y4G8 1499 aa35.09■■■■□ 3.21
APP-215ENST00000474136 ZCCHC11Q5TAX3 1644 aaKnown RBP35.09■■■■□ 3.21
APP-215ENST00000474136 TEX14Q8IWB6 1497 aa35.07■■■■□ 3.2
APP-215ENST00000474136 KIAA0556O60303 1618 aa35.06■■■■□ 3.2
APP-215ENST00000474136 WDR7Q9Y4E6 1490 aa34.99■■■■□ 3.19
APP-215ENST00000474136 HECW2Q9P2P5 1572 aa34.93■■■■□ 3.18
APP-215ENST00000474136 KCNH8Q96L42 1107 aa34.87■■■■□ 3.17
APP-215ENST00000474136 CD109Q6YHK3 1445 aa34.85■■■■□ 3.17
APP-215ENST00000474136 MAGI3Q5TCQ9 1506 aa34.81■■■■□ 3.16
APP-215ENST00000474136 ABCA8O94911 1581 aa34.79■■■■□ 3.16
APP-215ENST00000474136 GOLGA3Q08378 1498 aa34.76■■■■□ 3.16
APP-215ENST00000474136 CTTNBP2Q8WZ74 1663 aa34.74■■■■□ 3.15
APP-215ENST00000474136 CFAP43Q8NDM7 1665 aa34.73■■■■□ 3.15
APP-215ENST00000474136 ARID3CA6NKF2 412 aa34.66■■■■□ 3.14
APP-215ENST00000474136 KIF21BO75037 1637 aa34.62■■■■□ 3.13
APP-215ENST00000474136 PRXQ9BXM0 1461 aa34.61■■■■□ 3.13
APP-215ENST00000474136 P3H3Q8IVL6 736 aa34.57■■■■□ 3.13
APP-215ENST00000474136 ARAP3Q8WWN8 1544 aa34.55■■■■□ 3.12
APP-215ENST00000474136 ATP10BO94823 1461 aa34.54■■■■□ 3.12
APP-215ENST00000474136 RAPGEF3O95398 923 aa34.44■■■■□ 3.1
APP-215ENST00000474136 FAM9AQ8IZU1 332 aaPredicted RBP34.43■■■■□ 3.1
APP-215ENST00000474136 ABCA9Q8IUA7 1624 aa34.4■■■■□ 3.1
APP-215ENST00000474136 PTPRMP28827 1452 aa34.39■■■■□ 3.1
APP-215ENST00000474136 PHLDB1Q86UU1 1377 aa34.39■■■■□ 3.1
APP-215ENST00000474136 ADAMTSL3P82987 1691 aa34.35■■■■□ 3.09
APP-215ENST00000474136 FBXO41Q8TF61 875 aa34.35■■■■□ 3.09
APP-215ENST00000474136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.31■■■■□ 3.08
APP-215ENST00000474136 HNRNPUL2Q1KMD3 747 aaKnown RBP34.31■■■■□ 3.08
APP-215ENST00000474136 NEO1Q92859 1461 aa34.3■■■■□ 3.08
APP-215ENST00000474136 SAMD9Q5K651 1589 aa34.27■■■■□ 3.08
APP-215ENST00000474136 RAPGEF6Q8TEU7 1601 aa34.27■■■■□ 3.08
APP-215ENST00000474136 ARID4BQ4LE39 1312 aaPredicted RBP34.27■■■■□ 3.08
APP-215ENST00000474136 FRMPD1Q5SYB0 1578 aa34.26■■■■□ 3.07
APP-215ENST00000474136 CSRNP3Q8WYN3 585 aa34.22■■■■□ 3.07
APP-215ENST00000474136 BCORL1Q5H9F3 1711 aa34.21■■■■□ 3.07
APP-215ENST00000474136 NUP153P49790 1475 aaKnown RBP34.2■■■■□ 3.07
APP-215ENST00000474136 MADDQ8WXG6 1647 aa34.19■■■■□ 3.06
APP-215ENST00000474136 RANGAP1P46060 587 aaPredicted RBP34.19■■■■□ 3.06
APP-215ENST00000474136 PCF11O94913 1555 aaKnown RBP34.15■■■■□ 3.06
APP-215ENST00000474136 LMTK3Q96Q04 1460 aa34.14■■■■□ 3.06
APP-215ENST00000474136 FHOD3Q2V2M9 1422 aa34.12■■■■□ 3.05
APP-215ENST00000474136 DENND4BO75064 1496 aaPredicted RBP34.1■■■■□ 3.05
APP-215ENST00000474136 ARHGEF40Q8TER5 1519 aa34.08■■■■□ 3.05
APP-215ENST00000474136 PLEKHD1A6NEE1 506 aa34.07■■■■□ 3.05
APP-215ENST00000474136 AKNAQ7Z591 1439 aa34.07■■■■□ 3.04
APP-215ENST00000474136 PLPPR3Q6T4P5 718 aa34.04■■■■□ 3.04
APP-215ENST00000474136 RIMS1Q86UR5 1692 aaKnown RBP34.04■■■■□ 3.04
APP-215ENST00000474136 HSPA2P54652 639 aa34.03■■■■□ 3.04
APP-215ENST00000474136 FANCAO15360 1455 aa34.02■■■■□ 3.04
APP-215ENST00000474136 RICTORQ6R327 1708 aa34.02■■■■□ 3.04
APP-215ENST00000474136 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.98■■■■□ 3.03
APP-215ENST00000474136 YEATS2Q9ULM3 1422 aa33.97■■■■□ 3.03
APP-215ENST00000474136 TTC37Q6PGP7 1564 aa33.93■■■■□ 3.02
APP-215ENST00000474136 ZMYM4Q5VZL5 1548 aa33.91■■■■□ 3.02
APP-215ENST00000474136 POGZQ7Z3K3 1410 aa33.91■■■■□ 3.02
APP-215ENST00000474136 SIGLEC1Q9BZZ2 1709 aa33.9■■■■□ 3.02
APP-215ENST00000474136 CFAP74Q9C0B2 1584 aa33.9■■■■□ 3.02
APP-215ENST00000474136 MLECQ14165 292 aa33.9■■■■□ 3.02
APP-215ENST00000474136 ZFYVE16Q7Z3T8 1539 aa33.89■■■■□ 3.02
APP-215ENST00000474136 EEA1Q15075 1411 aa33.86■■■■□ 3.01
APP-215ENST00000474136 EFCAB5A4FU69 1503 aa33.85■■■■□ 3.01
APP-215ENST00000474136 CDK13Q14004 1512 aaKnown RBP33.84■■■■□ 3.01
APP-215ENST00000474136 HECW1Q76N89 1606 aa33.82■■■■□ 3
APP-215ENST00000474136 MAGI2Q86UL8 1455 aa33.81■■■■□ 3
APP-215ENST00000474136 SCAPERQ9BY12 1400 aa33.81■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms