RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 RUSC2Q8N2Y8 1516 aa31.17■■■□□ 2.58
CUL4A-208ENST00000474116 ABCC10Q5T3U5 1492 aa31.12■■■□□ 2.57
CUL4A-208ENST00000474116 FAM69CQ0P6D2 419 aa31.11■■■□□ 2.57
CUL4A-208ENST00000474116 MAPKBP1O60336 1514 aa31.08■■■□□ 2.57
CUL4A-208ENST00000474116 NPM1P06748 294 aaKnown RBP eCLIP31.07■■■□□ 2.56
CUL4A-208ENST00000474116 ADCY10Q96PN6 1610 aa31.04■■■□□ 2.56
CUL4A-208ENST00000474116 DIP2BQ9P265 1576 aa31.01■■■□□ 2.56
CUL4A-208ENST00000474116 KIAA0586Q9BVV6 1533 aa30.98■■■□□ 2.55
CUL4A-208ENST00000474116 IGF1RP08069 1367 aa30.96■■■□□ 2.55
CUL4A-208ENST00000474116 CUL7Q14999 1698 aa30.86■■■□□ 2.53
CUL4A-208ENST00000474116 KIF27Q86VH2 1401 aa30.85■■■□□ 2.53
CUL4A-208ENST00000474116 KDM6BO15054 1643 aa30.84■■■□□ 2.53
CUL4A-208ENST00000474116 KDM4FA0A1W2PPD8 638 aa30.82■■■□□ 2.52
CUL4A-208ENST00000474116 TSPOAP1O95153 1857 aa30.79■■■□□ 2.52
CUL4A-208ENST00000474116 PTPRGP23470 1445 aa30.78■■■□□ 2.52
CUL4A-208ENST00000474116 CARMIL1Q5VZK9 1371 aa30.71■■■□□ 2.51
CUL4A-208ENST00000474116 TNIKQ9UKE5 1360 aa30.68■■■□□ 2.5
CUL4A-208ENST00000474116 ABCC2Q92887 1545 aa30.68■■■□□ 2.5
CUL4A-208ENST00000474116 CARMIL2Q6F5E8 1435 aa30.65■■■□□ 2.5
CUL4A-208ENST00000474116 TTBK1Q5TCY1 1321 aaPredicted RBP30.65■■■□□ 2.5
CUL4A-208ENST00000474116 ASXL2Q76L83 1435 aa30.62■■■□□ 2.49
CUL4A-208ENST00000474116 GLI2P10070 1586 aa30.61■■■□□ 2.49
CUL4A-208ENST00000474116 PLB1Q6P1J6 1458 aa30.6■■■□□ 2.49
CUL4A-208ENST00000474116 PPRC1Q5VV67 1664 aaKnown RBP30.59■■■□□ 2.49
CUL4A-208ENST00000474116 UHRF1BP1LA0JNW5 1464 aa30.59■■■□□ 2.49
CUL4A-208ENST00000474116 IQGAP2Q13576 1575 aa30.58■■■□□ 2.49
CUL4A-208ENST00000474116 UACAQ9BZF9 1416 aa30.53■■■□□ 2.48
CUL4A-208ENST00000474116 DISP1Q96F81 1524 aa30.52■■■□□ 2.48
CUL4A-208ENST00000474116 KDM5BQ9UGL1 1544 aa30.45■■■□□ 2.47
CUL4A-208ENST00000474116 COL17A1Q9UMD9 1497 aaPredicted RBP30.44■■■□□ 2.46
CUL4A-208ENST00000474116 EPRSP07814 1512 aaKnown RBP30.43■■■□□ 2.46
CUL4A-208ENST00000474116 UGGT2Q9NYU1 1516 aa30.42■■■□□ 2.46
CUL4A-208ENST00000474116 MAP3K4Q9Y6R4 1608 aa30.41■■■□□ 2.46
CUL4A-208ENST00000474116 ADGRL1O94910 1474 aa30.4■■■□□ 2.46
CUL4A-208ENST00000474116 RAPGEF2Q9Y4G8 1499 aa30.37■■■□□ 2.45
CUL4A-208ENST00000474116 ZCCHC11Q5TAX3 1644 aaKnown RBP30.36■■■□□ 2.45
CUL4A-208ENST00000474116 KIAA0556O60303 1618 aa30.33■■■□□ 2.45
CUL4A-208ENST00000474116 TEX14Q8IWB6 1497 aa30.32■■■□□ 2.44
CUL4A-208ENST00000474116 ILDR1Q86SU0 546 aaPredicted RBP30.31■■■□□ 2.44
CUL4A-208ENST00000474116 WDR7Q9Y4E6 1490 aa30.23■■■□□ 2.43
CUL4A-208ENST00000474116 HECW2Q9P2P5 1572 aa30.13■■■□□ 2.41
CUL4A-208ENST00000474116 MAGI3Q5TCQ9 1506 aa30.12■■■□□ 2.41
CUL4A-208ENST00000474116 CTTNBP2Q8WZ74 1663 aa30.11■■■□□ 2.41
CUL4A-208ENST00000474116 CD109Q6YHK3 1445 aa30.11■■■□□ 2.41
CUL4A-208ENST00000474116 ABCA8O94911 1581 aa30.11■■■□□ 2.41
CUL4A-208ENST00000474116 GOLGA3Q08378 1498 aa30.09■■■□□ 2.41
CUL4A-208ENST00000474116 CFAP43Q8NDM7 1665 aa30.08■■■□□ 2.41
CUL4A-208ENST00000474116 KCNH8Q96L42 1107 aa30.06■■■□□ 2.4
CUL4A-208ENST00000474116 PRXQ9BXM0 1461 aa29.97■■■□□ 2.39
CUL4A-208ENST00000474116 ARAP3Q8WWN8 1544 aa29.91■■■□□ 2.38
CUL4A-208ENST00000474116 KIF21BO75037 1637 aa29.89■■■□□ 2.38
CUL4A-208ENST00000474116 ATP10BO94823 1461 aa29.87■■■□□ 2.37
CUL4A-208ENST00000474116 ARID3CA6NKF2 412 aa29.82■■■□□ 2.36
CUL4A-208ENST00000474116 P3H3Q8IVL6 736 aa29.8■■■□□ 2.36
CUL4A-208ENST00000474116 ABCA9Q8IUA7 1624 aa29.79■■■□□ 2.36
CUL4A-208ENST00000474116 PHLDB1Q86UU1 1377 aa29.78■■■□□ 2.36
CUL4A-208ENST00000474116 FAM9AQ8IZU1 332 aaPredicted RBP29.77■■■□□ 2.36
CUL4A-208ENST00000474116 ADAMTSL3P82987 1691 aa29.72■■■□□ 2.35
CUL4A-208ENST00000474116 RAPGEF3O95398 923 aa29.71■■■□□ 2.35
CUL4A-208ENST00000474116 SAMD9Q5K651 1589 aa29.7■■■□□ 2.35
CUL4A-208ENST00000474116 PTPRMP28827 1452 aa29.69■■■□□ 2.34
CUL4A-208ENST00000474116 NEO1Q92859 1461 aa29.68■■■□□ 2.34
CUL4A-208ENST00000474116 RAPGEF6Q8TEU7 1601 aa29.66■■■□□ 2.34
CUL4A-208ENST00000474116 FRMPD1Q5SYB0 1578 aa29.62■■■□□ 2.33
CUL4A-208ENST00000474116 FBXO41Q8TF61 875 aa29.61■■■□□ 2.33
CUL4A-208ENST00000474116 CSRNP3Q8WYN3 585 aa29.6■■■□□ 2.33
CUL4A-208ENST00000474116 BCORL1Q5H9F3 1711 aa29.59■■■□□ 2.33
CUL4A-208ENST00000474116 NUP153P49790 1475 aaKnown RBP29.58■■■□□ 2.33
CUL4A-208ENST00000474116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.57■■■□□ 2.32
CUL4A-208ENST00000474116 HNRNPUL2Q1KMD3 747 aaKnown RBP29.57■■■□□ 2.32
CUL4A-208ENST00000474116 MADDQ8WXG6 1647 aa29.53■■■□□ 2.32
CUL4A-208ENST00000474116 ARID4BQ4LE39 1312 aaPredicted RBP29.51■■■□□ 2.32
CUL4A-208ENST00000474116 PCF11O94913 1555 aaKnown RBP29.48■■■□□ 2.31
CUL4A-208ENST00000474116 LMTK3Q96Q04 1460 aa29.47■■■□□ 2.31
CUL4A-208ENST00000474116 FHOD3Q2V2M9 1422 aa29.46■■■□□ 2.31
CUL4A-208ENST00000474116 RICTORQ6R327 1708 aa29.46■■■□□ 2.31
CUL4A-208ENST00000474116 DENND4BO75064 1496 aaPredicted RBP29.46■■■□□ 2.31
CUL4A-208ENST00000474116 ARHGEF40Q8TER5 1519 aa29.45■■■□□ 2.31
CUL4A-208ENST00000474116 PLEKHD1A6NEE1 506 aa29.45■■■□□ 2.31
CUL4A-208ENST00000474116 AKNAQ7Z591 1439 aa29.45■■■□□ 2.3
CUL4A-208ENST00000474116 RANGAP1P46060 587 aaPredicted RBP29.42■■■□□ 2.3
CUL4A-208ENST00000474116 FANCAO15360 1455 aa29.4■■■□□ 2.3
CUL4A-208ENST00000474116 RIMS1Q86UR5 1692 aaKnown RBP29.4■■■□□ 2.3
CUL4A-208ENST00000474116 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.4■■■□□ 2.33e-8■■■□□ 17.7
CUL4A-208ENST00000474116 CFAP74Q9C0B2 1584 aa29.37■■■□□ 2.29
CUL4A-208ENST00000474116 EEA1Q15075 1411 aa29.36■■■□□ 2.29
CUL4A-208ENST00000474116 ZMYM4Q5VZL5 1548 aa29.35■■■□□ 2.29
CUL4A-208ENST00000474116 TTC37Q6PGP7 1564 aa29.33■■■□□ 2.29
CUL4A-208ENST00000474116 SIGLEC1Q9BZZ2 1709 aa29.32■■■□□ 2.28
CUL4A-208ENST00000474116 POGZQ7Z3K3 1410 aa29.3■■■□□ 2.28
CUL4A-208ENST00000474116 YEATS2Q9ULM3 1422 aa29.3■■■□□ 2.28
CUL4A-208ENST00000474116 ZFYVE16Q7Z3T8 1539 aa29.29■■■□□ 2.28
CUL4A-208ENST00000474116 HSPA2P54652 639 aa29.28■■■□□ 2.28
CUL4A-208ENST00000474116 EFCAB5A4FU69 1503 aa29.28■■■□□ 2.28
CUL4A-208ENST00000474116 MAGI2Q86UL8 1455 aa29.28■■■□□ 2.28
CUL4A-208ENST00000474116 HECW1Q76N89 1606 aa29.24■■■□□ 2.27
CUL4A-208ENST00000474116 CDK13Q14004 1512 aaKnown RBP29.22■■■□□ 2.27
CUL4A-208ENST00000474116 PLPPR3Q6T4P5 718 aa29.22■■■□□ 2.27
CUL4A-208ENST00000474116 PLCH2O75038 1416 aa29.21■■■□□ 2.27
CUL4A-208ENST00000474116 SCAPERQ9BY12 1400 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms