RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 KIF13AQ9H1H9 1805 aa23.61■■□□□ 1.37
COPS7B-219ENST00000474042 KIF27Q86VH2 1401 aa23.61■■□□□ 1.37
COPS7B-219ENST00000474042 IGF1RP08069 1367 aa23.59■■□□□ 1.37
COPS7B-219ENST00000474042 KIAA0586Q9BVV6 1533 aa23.57■■□□□ 1.36
COPS7B-219ENST00000474042 ADCY10Q96PN6 1610 aa23.52■■□□□ 1.36
COPS7B-219ENST00000474042 MAPKBP1O60336 1514 aa23.5■■□□□ 1.35
COPS7B-219ENST00000474042 DIP2BQ9P265 1576 aa23.44■■□□□ 1.34
COPS7B-219ENST00000474042 ABCC10Q5T3U5 1492 aa23.43■■□□□ 1.34
COPS7B-219ENST00000474042 CARMIL1Q5VZK9 1371 aa23.42■■□□□ 1.34
COPS7B-219ENST00000474042 IQGAP2Q13576 1575 aa23.38■■□□□ 1.33
COPS7B-219ENST00000474042 NPM1P06748 294 aaKnown RBP eCLIP23.33■■□□□ 1.33
COPS7B-219ENST00000474042 FAM69CQ0P6D2 419 aa23.3■■□□□ 1.32
COPS7B-219ENST00000474042 PTPRGP23470 1445 aa23.3■■□□□ 1.32
COPS7B-219ENST00000474042 CARMIL2Q6F5E8 1435 aa23.3■■□□□ 1.32
COPS7B-219ENST00000474042 TNIKQ9UKE5 1360 aa23.28■■□□□ 1.32
COPS7B-219ENST00000474042 AEBP2Q6ZN18 517 aaPredicted RBP23.27■■□□□ 1.32
COPS7B-219ENST00000474042 ABCC2Q92887 1545 aa23.26■■□□□ 1.31
COPS7B-219ENST00000474042 DISP1Q96F81 1524 aa23.26■■□□□ 1.31
COPS7B-219ENST00000474042 RAPGEF2Q9Y4G8 1499 aa23.25■■□□□ 1.31
COPS7B-219ENST00000474042 UGGT2Q9NYU1 1516 aa23.24■■□□□ 1.31
COPS7B-219ENST00000474042 UHRF1BP1LA0JNW5 1464 aa23.23■■□□□ 1.31
COPS7B-219ENST00000474042 TSPOAP1O95153 1857 aa23.22■■□□□ 1.31
COPS7B-219ENST00000474042 KDM6BO15054 1643 aa23.21■■□□□ 1.31
COPS7B-219ENST00000474042 KIAA0556O60303 1618 aa23.19■■□□□ 1.3
COPS7B-219ENST00000474042 CTTNBP2Q8WZ74 1663 aa23.17■■□□□ 1.3
COPS7B-219ENST00000474042 GLI2P10070 1586 aa23.16■■□□□ 1.3
COPS7B-219ENST00000474042 UACAQ9BZF9 1416 aa23.16■■□□□ 1.3
COPS7B-219ENST00000474042 ASXL2Q76L83 1435 aa23.15■■□□□ 1.3
COPS7B-219ENST00000474042 PPRC1Q5VV67 1664 aaKnown RBP23.14■■□□□ 1.29
COPS7B-219ENST00000474042 PLB1Q6P1J6 1458 aa23.14■■□□□ 1.29
COPS7B-219ENST00000474042 KDM5BQ9UGL1 1544 aa23.13■■□□□ 1.29
COPS7B-219ENST00000474042 TTBK1Q5TCY1 1321 aaPredicted RBP23.12■■□□□ 1.29
COPS7B-219ENST00000474042 ZCCHC11Q5TAX3 1644 aaKnown RBP23.1■■□□□ 1.29
COPS7B-219ENST00000474042 MAP3K4Q9Y6R4 1608 aa23.05■■□□□ 1.28
COPS7B-219ENST00000474042 PRXQ9BXM0 1461 aa23.04■■□□□ 1.28
COPS7B-219ENST00000474042 EPRSP07814 1512 aaKnown RBP23.03■■□□□ 1.28
COPS7B-219ENST00000474042 GOLGA3Q08378 1498 aa22.99■■□□□ 1.27
COPS7B-219ENST00000474042 ABCA8O94911 1581 aa22.97■■□□□ 1.27
COPS7B-219ENST00000474042 WDR7Q9Y4E6 1490 aa22.95■■□□□ 1.26
COPS7B-219ENST00000474042 TEX14Q8IWB6 1497 aa22.92■■□□□ 1.26
COPS7B-219ENST00000474042 KDM4FA0A1W2PPD8 638 aa22.89■■□□□ 1.25
COPS7B-219ENST00000474042 COL17A1Q9UMD9 1497 aaPredicted RBP22.89■■□□□ 1.25
COPS7B-219ENST00000474042 CFAP43Q8NDM7 1665 aa22.87■■□□□ 1.25
COPS7B-219ENST00000474042 SAMD9Q5K651 1589 aa22.83■■□□□ 1.25
COPS7B-219ENST00000474042 MAGI3Q5TCQ9 1506 aa22.81■■□□□ 1.24
COPS7B-219ENST00000474042 ADGRL1O94910 1474 aa22.78■■□□□ 1.24
COPS7B-219ENST00000474042 CD109Q6YHK3 1445 aa22.75■■□□□ 1.23
COPS7B-219ENST00000474042 EEA1Q15075 1411 aa22.74■■□□□ 1.23
COPS7B-219ENST00000474042 CSRNP3Q8WYN3 585 aa22.72■■□□□ 1.23
COPS7B-219ENST00000474042 ATP10BO94823 1461 aa22.72■■□□□ 1.23
COPS7B-219ENST00000474042 RAPGEF6Q8TEU7 1601 aa22.71■■□□□ 1.23
COPS7B-219ENST00000474042 ABCA9Q8IUA7 1624 aa22.68■■□□□ 1.22
COPS7B-219ENST00000474042 P3H3Q8IVL6 736 aa22.65■■□□□ 1.22
COPS7B-219ENST00000474042 KCNH8Q96L42 1107 aa22.65■■□□□ 1.22
COPS7B-219ENST00000474042 ARAP3Q8WWN8 1544 aa22.62■■□□□ 1.21
COPS7B-219ENST00000474042 KIF21BO75037 1637 aa22.62■■□□□ 1.21
COPS7B-219ENST00000474042 NUP153P49790 1475 aaKnown RBP22.6■■□□□ 1.21
COPS7B-219ENST00000474042 FAM9AQ8IZU1 332 aaPredicted RBP22.6■■□□□ 1.21
COPS7B-219ENST00000474042 ARID3CA6NKF2 412 aa22.59■■□□□ 1.21
COPS7B-219ENST00000474042 FHOD3Q2V2M9 1422 aa22.57■■□□□ 1.2
COPS7B-219ENST00000474042 EFCAB5A4FU69 1503 aa22.57■■□□□ 1.2
COPS7B-219ENST00000474042 NEO1Q92859 1461 aa22.53■■□□□ 1.2
COPS7B-219ENST00000474042 PHLDB1Q86UU1 1377 aa22.52■■□□□ 1.2
COPS7B-219ENST00000474042 FRMPD1Q5SYB0 1578 aa22.51■■□□□ 1.19
COPS7B-219ENST00000474042 HECW2Q9P2P5 1572 aa22.5■■□□□ 1.19
COPS7B-219ENST00000474042 CFAP74Q9C0B2 1584 aa22.42■■□□□ 1.18
COPS7B-219ENST00000474042 RANGAP1P46060 587 aaPredicted RBP22.42■■□□□ 1.18
COPS7B-219ENST00000474042 ADAMTSL3P82987 1691 aa22.42■■□□□ 1.18
COPS7B-219ENST00000474042 RICTORQ6R327 1708 aa22.41■■□□□ 1.18
COPS7B-219ENST00000474042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.41■■□□□ 1.18
COPS7B-219ENST00000474042 HNRNPUL2Q1KMD3 747 aaKnown RBP22.41■■□□□ 1.18
COPS7B-219ENST00000474042 TTC37Q6PGP7 1564 aa22.41■■□□□ 1.18
COPS7B-219ENST00000474042 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.41■■□□□ 1.18
COPS7B-219ENST00000474042 ARHGEF40Q8TER5 1519 aa22.39■■□□□ 1.17
COPS7B-219ENST00000474042 CDK13Q14004 1512 aaKnown RBP22.38■■□□□ 1.17
COPS7B-219ENST00000474042 RAPGEF3O95398 923 aa22.37■■□□□ 1.17
COPS7B-219ENST00000474042 BCORL1Q5H9F3 1711 aa22.37■■□□□ 1.17
COPS7B-219ENST00000474042 FANCAO15360 1455 aa22.34■■□□□ 1.17
COPS7B-219ENST00000474042 PLEKHD1A6NEE1 506 aa22.34■■□□□ 1.17
COPS7B-219ENST00000474042 HECW1Q76N89 1606 aa22.34■■□□□ 1.17
COPS7B-219ENST00000474042 ZMYM4Q5VZL5 1548 aa22.33■■□□□ 1.17
COPS7B-219ENST00000474042 DENND4BO75064 1496 aaPredicted RBP22.33■■□□□ 1.16
COPS7B-219ENST00000474042 ARHGAP35Q9NRY4 1499 aa22.32■■□□□ 1.16
COPS7B-219ENST00000474042 AKNAQ7Z591 1439 aa22.31■■□□□ 1.16
COPS7B-219ENST00000474042 PTPRMP28827 1452 aa22.3■■□□□ 1.16
COPS7B-219ENST00000474042 MADDQ8WXG6 1647 aa22.3■■□□□ 1.16
COPS7B-219ENST00000474042 FMN1Q68DA7 1419 aa22.3■■□□□ 1.16
COPS7B-219ENST00000474042 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
COPS7B-219ENST00000474042 MYO5CQ9NQX4 1742 aa22.25■■□□□ 1.15
COPS7B-219ENST00000474042 LRRIQ1Q96JM4 1722 aa22.24■■□□□ 1.15
COPS7B-219ENST00000474042 SIGLEC1Q9BZZ2 1709 aa22.24■■□□□ 1.15
COPS7B-219ENST00000474042 ZFYVE16Q7Z3T8 1539 aa22.23■■□□□ 1.15
COPS7B-219ENST00000474042 UBTFP17480 764 aaKnown RBP22.23■■□□□ 1.15
COPS7B-219ENST00000474042 PLCH2O75038 1416 aa22.23■■□□□ 1.15
COPS7B-219ENST00000474042 KIF14Q15058 1648 aa22.21■■□□□ 1.15
COPS7B-219ENST00000474042 RIMS1Q86UR5 1692 aaKnown RBP22.21■■□□□ 1.15
COPS7B-219ENST00000474042 POGZQ7Z3K3 1410 aa22.21■■□□□ 1.15
COPS7B-219ENST00000474042 MAGI2Q86UL8 1455 aa22.21■■□□□ 1.15
COPS7B-219ENST00000474042 ILDR1Q86SU0 546 aaPredicted RBP22.19■■□□□ 1.14
COPS7B-219ENST00000474042 YEATS2Q9ULM3 1422 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms