RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 NISCHQ9Y2I1 1504 aa33.9■■■■□ 3.02
COPS7B-219ENST00000474042 CCDC180Q9P1Z9 1646 aa30.52■■■□□ 2.48
COPS7B-219ENST00000474042 ABCC9O60706 1549 aa30.36■■■□□ 2.45
COPS7B-219ENST00000474042 RB1CC1Q8TDY2 1594 aa28.97■■■□□ 2.23
COPS7B-219ENST00000474042 NACADO15069 1562 aa28.79■■■□□ 2.2
COPS7B-219ENST00000474042 MYO15BQ96JP2 1530 aa28.43■■■□□ 2.14
COPS7B-219ENST00000474042 DNAJC5BQ9UF47 199 aa28.42■■■□□ 2.14
COPS7B-219ENST00000474042 UNC13AQ9UPW8 1703 aa28.4■■■□□ 2.14
COPS7B-219ENST00000474042 DCAF8L2P0C7V8 631 aa28.34■■■□□ 2.13
COPS7B-219ENST00000474042 PABPN1Q86U42 306 aaKnown RBP eCLIP28.17■■■□□ 2.1
COPS7B-219ENST00000474042 BICRAQ9NZM4 1560 aa28.16■■■□□ 2.1
COPS7B-219ENST00000474042 ZCCHC6Q5VYS8 1495 aaKnown RBP28.14■■■□□ 2.09
COPS7B-219ENST00000474042 DCAF1Q9Y4B6 1507 aa28.06■■■□□ 2.08
COPS7B-219ENST00000474042 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.04
COPS7B-219ENST00000474042 SCRIBQ14160 1630 aa27.71■■■□□ 2.03
COPS7B-219ENST00000474042 CC2D2AQ9P2K1 1620 aa27.49■■□□□ 1.99
COPS7B-219ENST00000474042 EIF4G1Q04637 1599 aaKnown RBP27.44■■□□□ 1.98
COPS7B-219ENST00000474042 CECR2Q9BXF3 1484 aa27.37■■□□□ 1.97
COPS7B-219ENST00000474042 NCAPD3P42695 1498 aa26.54■■□□□ 1.84
COPS7B-219ENST00000474042 SMARCA4P51532 1647 aa26.48■■□□□ 1.83
COPS7B-219ENST00000474042 ATAD2BQ9ULI0 1458 aa26.45■■□□□ 1.82
COPS7B-219ENST00000474042 HMGXB3Q12766 1538 aa26.41■■□□□ 1.82
COPS7B-219ENST00000474042 SMARCA2P51531 1590 aa26.41■■□□□ 1.82
COPS7B-219ENST00000474042 BAZ1AQ9NRL2 1556 aaPredicted RBP26.32■■□□□ 1.8
COPS7B-219ENST00000474042 PEG3Q9GZU2 1588 aa26.25■■□□□ 1.79
COPS7B-219ENST00000474042 CUX2O14529 1486 aa26.23■■□□□ 1.79
COPS7B-219ENST00000474042 ERCC6Q03468 1493 aa26.2■■□□□ 1.78
COPS7B-219ENST00000474042 BAZ1BQ9UIG0 1483 aaKnown RBP26.18■■□□□ 1.78
COPS7B-219ENST00000474042 MROH2BQ7Z745 1585 aa26.11■■□□□ 1.77
COPS7B-219ENST00000474042 DNAJC5Q9H3Z4 198 aa26.1■■□□□ 1.77
COPS7B-219ENST00000474042 NESP48681 1621 aa26.1■■□□□ 1.77
COPS7B-219ENST00000474042 LAMC3Q9Y6N6 1575 aa25.99■■□□□ 1.75
COPS7B-219ENST00000474042 THOC2Q8NI27 1593 aaKnown RBP25.95■■□□□ 1.74
COPS7B-219ENST00000474042 KIF21AQ7Z4S6 1674 aa25.84■■□□□ 1.73
COPS7B-219ENST00000474042 WIZO95785 1651 aa25.8■■□□□ 1.72
COPS7B-219ENST00000474042 PDS5BQ9NTI5 1447 aa25.75■■□□□ 1.71
COPS7B-219ENST00000474042 CADPSQ9ULU8 1353 aa25.69■■□□□ 1.7
COPS7B-219ENST00000474042 MRC2Q9UBG0 1479 aa25.58■■□□□ 1.69
COPS7B-219ENST00000474042 WDR62O43379 1518 aa25.56■■□□□ 1.68
COPS7B-219ENST00000474042 RSF1Q96T23 1441 aaPredicted RBP25.54■■□□□ 1.68
COPS7B-219ENST00000474042 TOP2AP11388 1531 aaKnown RBP25.51■■□□□ 1.67
COPS7B-219ENST00000474042 CEP164Q9UPV0 1460 aa25.47■■□□□ 1.67
COPS7B-219ENST00000474042 CFTRP13569 1480 aa25.45■■□□□ 1.66
COPS7B-219ENST00000474042 FANCD2Q9BXW9 1451 aa25.42■■□□□ 1.66
COPS7B-219ENST00000474042 PRDM2Q13029 1718 aa25.32■■□□□ 1.64
COPS7B-219ENST00000474042 URB2Q14146 1524 aaKnown RBP25.24■■□□□ 1.63
COPS7B-219ENST00000474042 CCDC88BA6NC98 1476 aa25.15■■□□□ 1.62
COPS7B-219ENST00000474042 TOPBP1Q92547 1522 aa24.96■■□□□ 1.59
COPS7B-219ENST00000474042 IFT140Q96RY7 1462 aa24.96■■□□□ 1.59
COPS7B-219ENST00000474042 DNMBPQ6XZF7 1577 aa24.91■■□□□ 1.58
COPS7B-219ENST00000474042 ZNF608Q9ULD9 1512 aaPredicted RBP24.91■■□□□ 1.58
COPS7B-219ENST00000474042 ABCC8Q09428 1581 aa24.89■■□□□ 1.58
COPS7B-219ENST00000474042 OSCARQ8IYS5 282 aa24.88■■□□□ 1.57
COPS7B-219ENST00000474042 TRIM41Q8WV44 630 aa24.88■■□□□ 1.57
COPS7B-219ENST00000474042 EIF4G3O43432 1585 aaKnown RBP24.84■■□□□ 1.57
COPS7B-219ENST00000474042 TARBP1Q13395 1621 aaKnown RBP24.79■■□□□ 1.56
COPS7B-219ENST00000474042 RIMBP3CA6NJZ7 1639 aa24.72■■□□□ 1.55
COPS7B-219ENST00000474042 RIMBP3BA6NNM3 1639 aa24.72■■□□□ 1.55
COPS7B-219ENST00000474042 RIMBP3Q9UFD9 1639 aa24.72■■□□□ 1.55
COPS7B-219ENST00000474042 POLA1P09884 1462 aaPredicted RBP24.71■■□□□ 1.55
COPS7B-219ENST00000474042 CHD1O14646 1710 aa24.66■■□□□ 1.54
COPS7B-219ENST00000474042 AQRO60306 1485 aaKnown RBP eCLIP24.63■■□□□ 1.532e-6■■■■■ 29.8
COPS7B-219ENST00000474042 ARHGEF11O15085 1522 aa24.62■■□□□ 1.53
COPS7B-219ENST00000474042 WDR97A6NE52 1622 aa24.57■■□□□ 1.52
COPS7B-219ENST00000474042 RAD54L2Q9Y4B4 1467 aa24.57■■□□□ 1.52
COPS7B-219ENST00000474042 CUX1P39880 1505 aa24.55■■□□□ 1.52
COPS7B-219ENST00000474042 FGD5Q6ZNL6 1462 aa24.54■■□□□ 1.52
COPS7B-219ENST00000474042 SOGA1O94964 1423 aa24.52■■□□□ 1.52
COPS7B-219ENST00000474042 TDRD9Q8NDG6 1382 aaKnown RBP24.45■■□□□ 1.5
COPS7B-219ENST00000474042 SNAPC4Q5SXM2 1469 aa24.44■■□□□ 1.5
COPS7B-219ENST00000474042 MAGI1Q96QZ7 1491 aaPredicted RBP24.39■■□□□ 1.5
COPS7B-219ENST00000474042 ARAP1Q96P48 1450 aa24.38■■□□□ 1.49
COPS7B-219ENST00000474042 CLASP1Q7Z460 1538 aa24.38■■□□□ 1.49
COPS7B-219ENST00000474042 GRIN2BQ13224 1484 aa24.37■■□□□ 1.49
COPS7B-219ENST00000474042 FBLN2P98095 1184 aa24.36■■□□□ 1.49
COPS7B-219ENST00000474042 PBRM1Q86U86 1689 aa24.36■■□□□ 1.49
COPS7B-219ENST00000474042 SYNJ1O43426 1573 aa24.32■■□□□ 1.48
COPS7B-219ENST00000474042 ABCA5Q8WWZ7 1642 aa24.31■■□□□ 1.48
COPS7B-219ENST00000474042 SYNJ2O15056 1496 aa24.3■■□□□ 1.48
COPS7B-219ENST00000474042 ABCA10Q8WWZ4 1543 aa24.29■■□□□ 1.48
COPS7B-219ENST00000474042 CYB5RLQ6IPT4 315 aa24.28■■□□□ 1.48
COPS7B-219ENST00000474042 GAPVD1Q14C86 1478 aa24.26■■□□□ 1.47
COPS7B-219ENST00000474042 SUPT5HO00267 1087 aaKnown RBP24.23■■□□□ 1.47
COPS7B-219ENST00000474042 CHMP7Q8WUX9 453 aaPredicted RBP24.21■■□□□ 1.47
COPS7B-219ENST00000474042 BIVM-ERCC5R4GMW8 1640 aa24.21■■□□□ 1.47
COPS7B-219ENST00000474042 TOP2BQ02880 1626 aa24.17■■□□□ 1.46
COPS7B-219ENST00000474042 WRNQ14191 1432 aaPredicted RBP eCLIP24.12■■□□□ 1.45
COPS7B-219ENST00000474042 ADAMTS12P58397 1594 aa24.12■■□□□ 1.45
COPS7B-219ENST00000474042 GRIN2AQ12879 1464 aa24.07■■□□□ 1.44
COPS7B-219ENST00000474042 CEP170Q5SW79 1584 aa24.02■■□□□ 1.44
COPS7B-219ENST00000474042 NUP160Q12769 1436 aa24.01■■□□□ 1.43
COPS7B-219ENST00000474042 ERICH3Q5RHP9 1530 aa24■■□□□ 1.43
COPS7B-219ENST00000474042 TRHP20396 242 aaPredicted RBP23.98■■□□□ 1.43
COPS7B-219ENST00000474042 FHAD1B1AJZ9 1412 aa23.96■■□□□ 1.43
COPS7B-219ENST00000474042 SHROOM2Q13796 1616 aa23.95■■□□□ 1.43
COPS7B-219ENST00000474042 ERCC6L2Q5T890 1561 aa23.95■■□□□ 1.43
COPS7B-219ENST00000474042 RUSC2Q8N2Y8 1516 aa23.79■■□□□ 1.4
COPS7B-219ENST00000474042 PRG4Q92954 1404 aaPredicted RBP23.69■■□□□ 1.38
COPS7B-219ENST00000474042 CUL7Q14999 1698 aa23.67■■□□□ 1.38
COPS7B-219ENST00000474042 JPH4Q96JJ6 628 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms