RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 SHROOM2Q13796 1616 aa31.45■■■□□ 2.62
CTDSP1-207ENST00000473420 CTTNBP2Q8WZ74 1663 aa31.42■■■□□ 2.62
CTDSP1-207ENST00000473420 ARHGEF11O15085 1522 aa31.37■■■□□ 2.61
CTDSP1-207ENST00000473420 RIMBP3CA6NJZ7 1639 aa31.36■■■□□ 2.61
CTDSP1-207ENST00000473420 RIMBP3BA6NNM3 1639 aa31.36■■■□□ 2.61
CTDSP1-207ENST00000473420 RIMBP3Q9UFD9 1639 aa31.36■■■□□ 2.61
CTDSP1-207ENST00000473420 IQGAP2Q13576 1575 aa31.36■■■□□ 2.61
CTDSP1-207ENST00000473420 JPH4Q96JJ6 628 aa31.27■■■□□ 2.6
CTDSP1-207ENST00000473420 GOLGA3Q08378 1498 aa31.27■■■□□ 2.6
CTDSP1-207ENST00000473420 PRG4Q92954 1404 aaPredicted RBP31.21■■■□□ 2.59
CTDSP1-207ENST00000473420 UGGT2Q9NYU1 1516 aa31.2■■■□□ 2.59
CTDSP1-207ENST00000473420 ERCC6L2Q5T890 1561 aa31.19■■■□□ 2.58
CTDSP1-207ENST00000473420 ARAP1Q96P48 1450 aa31.13■■■□□ 2.57
CTDSP1-207ENST00000473420 CARMIL2Q6F5E8 1435 aa31.1■■■□□ 2.57
CTDSP1-207ENST00000473420 DISP1Q96F81 1524 aa31.08■■■□□ 2.57
CTDSP1-207ENST00000473420 KIAA0556O60303 1618 aa31.06■■■□□ 2.56
CTDSP1-207ENST00000473420 UBTFP17480 764 aaKnown RBP31.04■■■□□ 2.56
CTDSP1-207ENST00000473420 EHMT2Q96KQ7 1210 aa31■■■□□ 2.55
CTDSP1-207ENST00000473420 SAMD9Q5K651 1589 aa31■■■□□ 2.55
CTDSP1-207ENST00000473420 TNIKQ9UKE5 1360 aa30.96■■■□□ 2.55
CTDSP1-207ENST00000473420 CYB5RLQ6IPT4 315 aa30.94■■■□□ 2.54
CTDSP1-207ENST00000473420 EFCAB5A4FU69 1503 aa30.93■■■□□ 2.54
CTDSP1-207ENST00000473420 PTPRGP23470 1445 aa30.88■■■□□ 2.53
CTDSP1-207ENST00000473420 RANGAP1P46060 587 aaPredicted RBP30.78■■■□□ 2.52
CTDSP1-207ENST00000473420 ARHGAP35Q9NRY4 1499 aa30.76■■■□□ 2.51
CTDSP1-207ENST00000473420 ADCY10Q96PN6 1610 aa30.75■■■□□ 2.51
CTDSP1-207ENST00000473420 P3H3Q8IVL6 736 aa30.73■■■□□ 2.51
CTDSP1-207ENST00000473420 FHOD3Q2V2M9 1422 aa30.73■■■□□ 2.51
CTDSP1-207ENST00000473420 UHRF1BP1LA0JNW5 1464 aa30.72■■■□□ 2.51
CTDSP1-207ENST00000473420 LOC105371045A0A1W2PR82 267 aa30.72■■■□□ 2.51
CTDSP1-207ENST00000473420 UACAQ9BZF9 1416 aa30.71■■■□□ 2.51
CTDSP1-207ENST00000473420 TTBK1Q5TCY1 1321 aaPredicted RBP30.71■■■□□ 2.51
CTDSP1-207ENST00000473420 ABCC2Q92887 1545 aa30.69■■■□□ 2.5
CTDSP1-207ENST00000473420 ABCA8O94911 1581 aa30.69■■■□□ 2.5
CTDSP1-207ENST00000473420 CLIP1P30622 1438 aa30.68■■■□□ 2.5
CTDSP1-207ENST00000473420 PLB1Q6P1J6 1458 aa30.64■■■□□ 2.5
CTDSP1-207ENST00000473420 CEP162Q5TB80 1403 aa30.64■■■□□ 2.49
CTDSP1-207ENST00000473420 RAPGEF6Q8TEU7 1601 aa30.62■■■□□ 2.49
CTDSP1-207ENST00000473420 FMN1Q68DA7 1419 aa30.59■■■□□ 2.49
CTDSP1-207ENST00000473420 KDM5BQ9UGL1 1544 aa30.55■■■□□ 2.48
CTDSP1-207ENST00000473420 NPM1P06748 294 aaKnown RBP eCLIP30.53■■■□□ 2.48
CTDSP1-207ENST00000473420 MAPKBP1O60336 1514 aa30.52■■■□□ 2.48
CTDSP1-207ENST00000473420 ZCCHC11Q5TAX3 1644 aaKnown RBP30.51■■■□□ 2.48
CTDSP1-207ENST00000473420 HECW1Q76N89 1606 aa30.46■■■□□ 2.47
CTDSP1-207ENST00000473420 NUP153P49790 1475 aaKnown RBP30.45■■■□□ 2.47
CTDSP1-207ENST00000473420 PCF11O94913 1555 aaKnown RBP30.41■■■□□ 2.46
CTDSP1-207ENST00000473420 CASKIN1Q8WXD9 1431 aa30.39■■■□□ 2.45
CTDSP1-207ENST00000473420 ATP10BO94823 1461 aa30.38■■■□□ 2.45
CTDSP1-207ENST00000473420 FYCO1Q9BQS8 1478 aa30.37■■■□□ 2.45
CTDSP1-207ENST00000473420 ASXL2Q76L83 1435 aa30.34■■■□□ 2.45
CTDSP1-207ENST00000473420 LRRIQ1Q96JM4 1722 aa30.33■■■□□ 2.45
CTDSP1-207ENST00000473420 EPRSP07814 1512 aaKnown RBP30.31■■■□□ 2.44
CTDSP1-207ENST00000473420 KIF13AQ9H1H9 1805 aa30.29■■■□□ 2.44
CTDSP1-207ENST00000473420 ABCC10Q5T3U5 1492 aa30.28■■■□□ 2.44
CTDSP1-207ENST00000473420 WDR7Q9Y4E6 1490 aa30.28■■■□□ 2.44
CTDSP1-207ENST00000473420 DIP2BQ9P265 1576 aa30.28■■■□□ 2.44
CTDSP1-207ENST00000473420 VPS8Q8N3P4 1428 aa30.27■■■□□ 2.44
CTDSP1-207ENST00000473420 CCDC18Q5T9S5 1454 aa30.26■■■□□ 2.44
CTDSP1-207ENST00000473420 CDK13Q14004 1512 aaKnown RBP30.26■■■□□ 2.43
CTDSP1-207ENST00000473420 ARID3CA6NKF2 412 aa30.25■■■□□ 2.43
CTDSP1-207ENST00000473420 ATP1B4Q9UN42 357 aaPredicted RBP30.23■■■□□ 2.43
CTDSP1-207ENST00000473420 GLI2P10070 1586 aa30.2■■■□□ 2.43
CTDSP1-207ENST00000473420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.2■■■□□ 2.43
CTDSP1-207ENST00000473420 HNRNPUL2Q1KMD3 747 aaKnown RBP30.2■■■□□ 2.43
CTDSP1-207ENST00000473420 TRHP20396 242 aaPredicted RBP30.19■■■□□ 2.42
CTDSP1-207ENST00000473420 PLEKHD1A6NEE1 506 aa30.12■■■□□ 2.41
CTDSP1-207ENST00000473420 FAM69CQ0P6D2 419 aa30.11■■■□□ 2.41
CTDSP1-207ENST00000473420 CDK11AQ9UQ88 783 aaPredicted RBP30.11■■■□□ 2.41
CTDSP1-207ENST00000473420 CFAP43Q8NDM7 1665 aa30.1■■■□□ 2.41
CTDSP1-207ENST00000473420 MAP3K4Q9Y6R4 1608 aa30.08■■■□□ 2.41
CTDSP1-207ENST00000473420 ABCA9Q8IUA7 1624 aa30.06■■■□□ 2.4
CTDSP1-207ENST00000473420 TROQ12816 1431 aaPredicted RBP30.05■■■□□ 2.4
CTDSP1-207ENST00000473420 KCNH8Q96L42 1107 aa30.03■■■□□ 2.4
CTDSP1-207ENST00000473420 TIAM1Q13009 1591 aa30.03■■■□□ 2.4
CTDSP1-207ENST00000473420 MAP3K1Q13233 1512 aa30.02■■■□□ 2.4
CTDSP1-207ENST00000473420 MAGI3Q5TCQ9 1506 aa30.01■■■□□ 2.4
CTDSP1-207ENST00000473420 KIF14Q15058 1648 aa30■■■□□ 2.39
CTDSP1-207ENST00000473420 TSPOAP1O95153 1857 aa29.98■■■□□ 2.39
CTDSP1-207ENST00000473420 PPRC1Q5VV67 1664 aaKnown RBP29.97■■■□□ 2.39
CTDSP1-207ENST00000473420 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.96■■■□□ 2.393e-9■■■■■ 48.7
CTDSP1-207ENST00000473420 EHBP1L1Q8N3D4 1523 aa29.95■■■□□ 2.38
CTDSP1-207ENST00000473420 CD109Q6YHK3 1445 aa29.93■■■□□ 2.38
CTDSP1-207ENST00000473420 TTC37Q6PGP7 1564 aa29.93■■■□□ 2.38
CTDSP1-207ENST00000473420 MTUS2Q5JR59 1369 aa29.9■■■□□ 2.38
CTDSP1-207ENST00000473420 TEX14Q8IWB6 1497 aa29.88■■■□□ 2.37
CTDSP1-207ENST00000473420 MYO5CQ9NQX4 1742 aa29.87■■■□□ 2.37
CTDSP1-207ENST00000473420 LRRC9Q6ZRR7 1453 aa29.86■■■□□ 2.37
CTDSP1-207ENST00000473420 APLP2Q06481 763 aa29.84■■■□□ 2.37
CTDSP1-207ENST00000473420 SUPT6HQ7KZ85 1726 aaKnown RBP29.83■■■□□ 2.37
CTDSP1-207ENST00000473420 ARAP3Q8WWN8 1544 aa29.81■■■□□ 2.36
CTDSP1-207ENST00000473420 CFAP74Q9C0B2 1584 aa29.79■■■□□ 2.36
CTDSP1-207ENST00000473420 PREX2Q70Z35 1606 aa29.78■■■□□ 2.36
CTDSP1-207ENST00000473420 CDC42BPAQ5VT25 1732 aa29.77■■■□□ 2.36
CTDSP1-207ENST00000473420 PLCH2O75038 1416 aa29.77■■■□□ 2.36
CTDSP1-207ENST00000473420 NEO1Q92859 1461 aa29.74■■■□□ 2.35
CTDSP1-207ENST00000473420 CDC42BPBQ9Y5S2 1711 aa29.74■■■□□ 2.35
CTDSP1-207ENST00000473420 KANK4Q5T7N3 995 aaPredicted RBP29.72■■■□□ 2.35
CTDSP1-207ENST00000473420 ITSN2Q9NZM3 1697 aa29.72■■■□□ 2.35
CTDSP1-207ENST00000473420 PHLDB1Q86UU1 1377 aa29.71■■■□□ 2.35
CTDSP1-207ENST00000473420 NCOA2Q15596 1464 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms