RNA–Protein interactions for RNA: ENST00000473414.5

COMMD2-203, Transcript of COMM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD2, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-203ENST00000473414 ARHGEF11O15085 1522 aa10.42□□□□□ -0.74
COMMD2-203ENST00000473414 BCANQ96GW7 911 aa10.4□□□□□ -0.74
COMMD2-203ENST00000473414 FAM50AQ14320 339 aaKnown RBP10.4□□□□□ -0.74
COMMD2-203ENST00000473414 CHD1O14646 1710 aa10.4□□□□□ -0.74
COMMD2-203ENST00000473414 GRIN2BQ13224 1484 aa10.39□□□□□ -0.75
COMMD2-203ENST00000473414 ZNF608Q9ULD9 1512 aaPredicted RBP10.39□□□□□ -0.75
COMMD2-203ENST00000473414 CLASP1Q7Z460 1538 aa10.38□□□□□ -0.75
COMMD2-203ENST00000473414 POLA1P09884 1462 aaPredicted RBP10.38□□□□□ -0.75
COMMD2-203ENST00000473414 PCGF6Q9BYE7 350 aa10.37□□□□□ -0.75
COMMD2-203ENST00000473414 PLEKHG5O94827 1062 aa10.36□□□□□ -0.75
COMMD2-203ENST00000473414 SYNJ2O15056 1496 aa10.35□□□□□ -0.75
COMMD2-203ENST00000473414 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.33□□□□□ -0.76
COMMD2-203ENST00000473414 CARMIL1Q5VZK9 1371 aa10.33□□□□□ -0.76
COMMD2-203ENST00000473414 ZEB1P37275 1124 aaPredicted RBP10.33□□□□□ -0.76
COMMD2-203ENST00000473414 PBRM1Q86U86 1689 aa10.33□□□□□ -0.76
COMMD2-203ENST00000473414 ABCA10Q8WWZ4 1543 aa10.32□□□□□ -0.76
COMMD2-203ENST00000473414 FGD5Q6ZNL6 1462 aa10.32□□□□□ -0.76
COMMD2-203ENST00000473414 CHIC2Q9UKJ5 165 aa10.32□□□□□ -0.76
COMMD2-203ENST00000473414 PLEKHD1A6NEE1 506 aa10.31□□□□□ -0.76
COMMD2-203ENST00000473414 SCAF1Q9H7N4 1312 aaKnown RBP10.31□□□□□ -0.76
COMMD2-203ENST00000473414 ABCA5Q8WWZ7 1642 aa10.3□□□□□ -0.76
COMMD2-203ENST00000473414 KIF27Q86VH2 1401 aa10.3□□□□□ -0.76
COMMD2-203ENST00000473414 CHGAP10645 457 aaKnown RBP10.3□□□□□ -0.76
COMMD2-203ENST00000473414 BIVM-ERCC5R4GMW8 1640 aa10.29□□□□□ -0.76
COMMD2-203ENST00000473414 SNAPC4Q5SXM2 1469 aa10.28□□□□□ -0.76
COMMD2-203ENST00000473414 ERICH3Q5RHP9 1530 aa10.27□□□□□ -0.77
COMMD2-203ENST00000473414 ARAP1Q96P48 1450 aa10.27□□□□□ -0.77
COMMD2-203ENST00000473414 CDK11AQ9UQ88 783 aaPredicted RBP10.26□□□□□ -0.77
COMMD2-203ENST00000473414 GAPVD1Q14C86 1478 aa10.26□□□□□ -0.77
COMMD2-203ENST00000473414 CUX1P39880 1505 aa10.26□□□□□ -0.77
COMMD2-203ENST00000473414 TRIM26Q12899 539 aaPredicted RBP10.24□□□□□ -0.77
COMMD2-203ENST00000473414 CNGB1Q14028 1251 aaPredicted RBP10.23□□□□□ -0.77
COMMD2-203ENST00000473414 RUSC2Q8N2Y8 1516 aa10.23□□□□□ -0.77
COMMD2-203ENST00000473414 ADAMTS12P58397 1594 aa10.23□□□□□ -0.77
COMMD2-203ENST00000473414 TOP2BQ02880 1626 aa10.23□□□□□ -0.77
COMMD2-203ENST00000473414 STAG3Q9UJ98 1225 aa10.23□□□□□ -0.77
COMMD2-203ENST00000473414 SHROOM2Q13796 1616 aa10.23□□□□□ -0.77
COMMD2-203ENST00000473414 PELP1Q8IZL8 1130 aaKnown RBP10.23□□□□□ -0.77
COMMD2-203ENST00000473414 GGT6Q6P531 493 aa10.22□□□□□ -0.77
COMMD2-203ENST00000473414 FHAD1B1AJZ9 1412 aa10.22□□□□□ -0.77
COMMD2-203ENST00000473414 TRIM52Q96A61 297 aa10.21□□□□□ -0.77
COMMD2-203ENST00000473414 NUP160Q12769 1436 aa10.21□□□□□ -0.78
COMMD2-203ENST00000473414 PTPRGP23470 1445 aa10.2□□□□□ -0.78
COMMD2-203ENST00000473414 GRIN2AQ12879 1464 aa10.19□□□□□ -0.78
COMMD2-203ENST00000473414 PRG4Q92954 1404 aaPredicted RBP10.18□□□□□ -0.78
COMMD2-203ENST00000473414 RAPGEF3O95398 923 aa10.17□□□□□ -0.78
COMMD2-203ENST00000473414 CUL7Q14999 1698 aa10.16□□□□□ -0.78
COMMD2-203ENST00000473414 ZNF326Q5BKZ1 582 aaKnown RBP10.15□□□□□ -0.78
COMMD2-203ENST00000473414 IGF1RP08069 1367 aa10.13□□□□□ -0.79
COMMD2-203ENST00000473414 CFDP1Q9UEE9 299 aaPredicted RBP10.13□□□□□ -0.79
COMMD2-203ENST00000473414 CARMIL2Q6F5E8 1435 aa10.13□□□□□ -0.79
COMMD2-203ENST00000473414 POLR3GLQ9BT43 218 aa10.12□□□□□ -0.79
COMMD2-203ENST00000473414 CEP170Q5SW79 1584 aa10.11□□□□□ -0.79
COMMD2-203ENST00000473414 MTUS2Q5JR59 1369 aa10.11□□□□□ -0.79
COMMD2-203ENST00000473414 SLC4A1APQ9BWU0 796 aaKnown RBP10.11□□□□□ -0.79
COMMD2-203ENST00000473414 MAPKBP1O60336 1514 aa10.1□□□□□ -0.79
COMMD2-203ENST00000473414 TSPY4P0CV99 314 aa10.1□□□□□ -0.79
COMMD2-203ENST00000473414 TSPY10P0CW01 314 aa10.1□□□□□ -0.79
COMMD2-203ENST00000473414 C14orf37Q86TY3 774 aa10.09□□□□□ -0.79
COMMD2-203ENST00000473414 RRP7BPQ9NSQ0 103 aa10.09□□□□□ -0.79
COMMD2-203ENST00000473414 FHOD3Q2V2M9 1422 aa10.09□□□□□ -0.79
COMMD2-203ENST00000473414 HNRNPMP52272 730 aaKnown RBP eCLIP10.09□□□□□ -0.79
COMMD2-203ENST00000473414 NUTM2DQ5VT03 806 aaPredicted RBP10.06□□□□□ -0.8
COMMD2-203ENST00000473414 AFAP1Q8N556 730 aa10.06□□□□□ -0.8
COMMD2-203ENST00000473414 CEBPAP49715 358 aaPredicted RBP10.04□□□□□ -0.8
COMMD2-203ENST00000473414 KIAA0586Q9BVV6 1533 aa10.04□□□□□ -0.8
COMMD2-203ENST00000473414 HSPA2P54652 639 aa10.03□□□□□ -0.8
COMMD2-203ENST00000473414 GLI2P10070 1586 aa10.01□□□□□ -0.81
COMMD2-203ENST00000473414 NEUROD1Q13562 356 aa10.01□□□□□ -0.81
COMMD2-203ENST00000473414 RAPGEF2Q9Y4G8 1499 aa10.01□□□□□ -0.81
COMMD2-203ENST00000473414 UHRF1BP1LA0JNW5 1464 aa10□□□□□ -0.81
COMMD2-203ENST00000473414 CLIP1P30622 1438 aa10□□□□□ -0.81
COMMD2-203ENST00000473414 PPP1R15AO75807 674 aaPredicted RBP10□□□□□ -0.81
COMMD2-203ENST00000473414 KIF3BO15066 747 aa9.99□□□□□ -0.81
COMMD2-203ENST00000473414 EFCAB2Q5VUJ9 269 aa9.99□□□□□ -0.81
COMMD2-203ENST00000473414 ABCC10Q5T3U5 1492 aa9.99□□□□□ -0.81
COMMD2-203ENST00000473414 RGL3Q3MIN7 710 aa9.99□□□□□ -0.81
COMMD2-203ENST00000473414 KIF13AQ9H1H9 1805 aa9.97□□□□□ -0.81
COMMD2-203ENST00000473414 ZNF644Q9H582 1327 aaPredicted RBP9.97□□□□□ -0.81
COMMD2-203ENST00000473414 PLB1Q6P1J6 1458 aa9.96□□□□□ -0.81
COMMD2-203ENST00000473414 KANK4Q5T7N3 995 aaPredicted RBP9.95□□□□□ -0.82
COMMD2-203ENST00000473414 DIP2BQ9P265 1576 aa9.95□□□□□ -0.82
COMMD2-203ENST00000473414 A0A0G2JS52 829 aa9.94□□□□□ -0.82
COMMD2-203ENST00000473414 LMOD2Q6P5Q4 547 aa9.94□□□□□ -0.82
COMMD2-203ENST00000473414 KDM2AQ9Y2K7 1162 aa9.94□□□□□ -0.82
COMMD2-203ENST00000473414 RBM33Q96EV2 1170 aaKnown RBP9.94□□□□□ -0.82
COMMD2-203ENST00000473414 TNIKQ9UKE5 1360 aa9.93□□□□□ -0.82
COMMD2-203ENST00000473414 PIP4K2BP78356 416 aa9.93□□□□□ -0.82
COMMD2-203ENST00000473414 TEX14Q8IWB6 1497 aa9.93□□□□□ -0.82
COMMD2-203ENST00000473414 NUTM2FA1L443 756 aa9.93□□□□□ -0.82
COMMD2-203ENST00000473414 MYT1Q01538 1121 aa9.93□□□□□ -0.82
COMMD2-203ENST00000473414 GOLGA3Q08378 1498 aa9.92□□□□□ -0.82
COMMD2-203ENST00000473414 CCER1Q8TC90 406 aaPredicted RBP9.92□□□□□ -0.82
COMMD2-203ENST00000473414 IQGAP2Q13576 1575 aa9.91□□□□□ -0.82
COMMD2-203ENST00000473414 ZBTB7CA1YPR0 619 aa9.91□□□□□ -0.82
COMMD2-203ENST00000473414 UGGT2Q9NYU1 1516 aa9.91□□□□□ -0.82
COMMD2-203ENST00000473414 CCNB3Q8WWL7 1395 aa9.9□□□□□ -0.82
COMMD2-203ENST00000473414 CENPBP07199 599 aaPredicted RBP9.9□□□□□ -0.82
COMMD2-203ENST00000473414 SAFB2Q14151 953 aaKnown RBP eCLIP9.9□□□□□ -0.82
COMMD2-203ENST00000473414 SPAG9O60271 1321 aaKnown RBP9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms