RNA–Protein interactions for RNA: ENST00000473414.5

COMMD2-203, Transcript of COMM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD2, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-203ENST00000473414 NISCHQ9Y2I1 1504 aa14.32□□□□□ -0.12
COMMD2-203ENST00000473414 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
COMMD2-203ENST00000473414 CCDC180Q9P1Z9 1646 aa13.19□□□□□ -0.3
COMMD2-203ENST00000473414 ABCC9O60706 1549 aa12.88□□□□□ -0.35
COMMD2-203ENST00000473414 SHROOM4Q9ULL8 1493 aa12.66□□□□□ -0.38
COMMD2-203ENST00000473414 PABPN1Q86U42 306 aaKnown RBP eCLIP12.6□□□□□ -0.39
COMMD2-203ENST00000473414 RB1CC1Q8TDY2 1594 aa12.46□□□□□ -0.42
COMMD2-203ENST00000473414 NACADO15069 1562 aa12.41□□□□□ -0.42
COMMD2-203ENST00000473414 MYO15BQ96JP2 1530 aa12.39□□□□□ -0.43
COMMD2-203ENST00000473414 SUPT5HO00267 1087 aaKnown RBP12.23□□□□□ -0.45
COMMD2-203ENST00000473414 DCAF1Q9Y4B6 1507 aa12.14□□□□□ -0.47
COMMD2-203ENST00000473414 EHMT2Q96KQ7 1210 aa11.99□□□□□ -0.49
COMMD2-203ENST00000473414 UNC13AQ9UPW8 1703 aa11.94□□□□□ -0.5
COMMD2-203ENST00000473414 ZCCHC6Q5VYS8 1495 aaKnown RBP11.89□□□□□ -0.51
COMMD2-203ENST00000473414 BICRAQ9NZM4 1560 aa11.85□□□□□ -0.51
COMMD2-203ENST00000473414 DNAJC5BQ9UF47 199 aa11.81□□□□□ -0.52
COMMD2-203ENST00000473414 TTBK1Q5TCY1 1321 aaPredicted RBP11.69□□□□□ -0.54
COMMD2-203ENST00000473414 RANGAP1P46060 587 aaPredicted RBP11.67□□□□□ -0.54
COMMD2-203ENST00000473414 SCRIBQ14160 1630 aa11.63□□□□□ -0.55
COMMD2-203ENST00000473414 EIF4G1Q04637 1599 aaKnown RBP11.62□□□□□ -0.55
COMMD2-203ENST00000473414 CC2D2AQ9P2K1 1620 aa11.61□□□□□ -0.55
COMMD2-203ENST00000473414 CECR2Q9BXF3 1484 aa11.58□□□□□ -0.56
COMMD2-203ENST00000473414 FAM9AQ8IZU1 332 aaPredicted RBP11.58□□□□□ -0.56
COMMD2-203ENST00000473414 FBLN2P98095 1184 aa11.57□□□□□ -0.56
COMMD2-203ENST00000473414 CUX2O14529 1486 aa11.39□□□□□ -0.59
COMMD2-203ENST00000473414 HMGXB3Q12766 1538 aa11.35□□□□□ -0.59
COMMD2-203ENST00000473414 SMARCA2P51531 1590 aa11.35□□□□□ -0.59
COMMD2-203ENST00000473414 TRIM41Q8WV44 630 aa11.34□□□□□ -0.59
COMMD2-203ENST00000473414 NCAPD3P42695 1498 aa11.33□□□□□ -0.59
COMMD2-203ENST00000473414 ATP1B4Q9UN42 357 aaPredicted RBP11.33□□□□□ -0.6
COMMD2-203ENST00000473414 PEG3Q9GZU2 1588 aa11.26□□□□□ -0.61
COMMD2-203ENST00000473414 ERCC6Q03468 1493 aa11.24□□□□□ -0.61
COMMD2-203ENST00000473414 BAZ1AQ9NRL2 1556 aaPredicted RBP11.24□□□□□ -0.61
COMMD2-203ENST00000473414 SMARCA4P51532 1647 aa11.2□□□□□ -0.62
COMMD2-203ENST00000473414 ARID3CA6NKF2 412 aa11.19□□□□□ -0.62
COMMD2-203ENST00000473414 ATAD2BQ9ULI0 1458 aa11.17□□□□□ -0.62
COMMD2-203ENST00000473414 LAMC3Q9Y6N6 1575 aa11.17□□□□□ -0.62
COMMD2-203ENST00000473414 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.16□□□□□ -0.62
COMMD2-203ENST00000473414 HNRNPUL2Q1KMD3 747 aaKnown RBP11.16□□□□□ -0.62
COMMD2-203ENST00000473414 TRHP20396 242 aaPredicted RBP11.14□□□□□ -0.63
COMMD2-203ENST00000473414 DNAJC5Q9H3Z4 198 aa11.12□□□□□ -0.63
COMMD2-203ENST00000473414 BAZ1BQ9UIG0 1483 aaKnown RBP11.1□□□□□ -0.63
COMMD2-203ENST00000473414 PLPPR3Q6T4P5 718 aa11.08□□□□□ -0.64
COMMD2-203ENST00000473414 UBTFP17480 764 aaKnown RBP11.06□□□□□ -0.64
COMMD2-203ENST00000473414 PDS5BQ9NTI5 1447 aa11.05□□□□□ -0.64
COMMD2-203ENST00000473414 MYT1LQ9UL68 1186 aa11.03□□□□□ -0.64
COMMD2-203ENST00000473414 CHIC1Q5VXU3 224 aa11.02□□□□□ -0.64
COMMD2-203ENST00000473414 THOC2Q8NI27 1593 aaKnown RBP11.01□□□□□ -0.65
COMMD2-203ENST00000473414 P3H3Q8IVL6 736 aa11.01□□□□□ -0.65
COMMD2-203ENST00000473414 CHMP7Q8WUX9 453 aaPredicted RBP10.99□□□□□ -0.65
COMMD2-203ENST00000473414 CYB5RLQ6IPT4 315 aa10.97□□□□□ -0.65
COMMD2-203ENST00000473414 MRC2Q9UBG0 1479 aa10.93□□□□□ -0.66
COMMD2-203ENST00000473414 PPARGC1BQ86YN6 1023 aaKnown RBP10.93□□□□□ -0.66
COMMD2-203ENST00000473414 WDR62O43379 1518 aa10.92□□□□□ -0.66
COMMD2-203ENST00000473414 NESP48681 1621 aa10.91□□□□□ -0.66
COMMD2-203ENST00000473414 PRDM2Q13029 1718 aa10.9□□□□□ -0.67
COMMD2-203ENST00000473414 CADPSQ9ULU8 1353 aa10.9□□□□□ -0.67
COMMD2-203ENST00000473414 MROH2BQ7Z745 1585 aa10.86□□□□□ -0.67
COMMD2-203ENST00000473414 KIF21AQ7Z4S6 1674 aa10.86□□□□□ -0.67
COMMD2-203ENST00000473414 CEP164Q9UPV0 1460 aa10.84□□□□□ -0.67
COMMD2-203ENST00000473414 RSF1Q96T23 1441 aaPredicted RBP10.84□□□□□ -0.67
COMMD2-203ENST00000473414 TOP2AP11388 1531 aaKnown RBP10.83□□□□□ -0.68
COMMD2-203ENST00000473414 ABCC8Q09428 1581 aa10.83□□□□□ -0.68
COMMD2-203ENST00000473414 TDRD9Q8NDG6 1382 aaKnown RBP10.83□□□□□ -0.68
COMMD2-203ENST00000473414 WDR97A6NE52 1622 aa10.8□□□□□ -0.68
COMMD2-203ENST00000473414 CFTRP13569 1480 aa10.79□□□□□ -0.68
COMMD2-203ENST00000473414 NPM1P06748 294 aaKnown RBP eCLIP10.79□□□□□ -0.68
COMMD2-203ENST00000473414 KCNH8Q96L42 1107 aa10.78□□□□□ -0.68
COMMD2-203ENST00000473414 OSCARQ8IYS5 282 aa10.78□□□□□ -0.68
COMMD2-203ENST00000473414 LOC105371045A0A1W2PR82 267 aa10.77□□□□□ -0.69
COMMD2-203ENST00000473414 APLP2Q06481 763 aa10.75□□□□□ -0.69
COMMD2-203ENST00000473414 FANCD2Q9BXW9 1451 aa10.74□□□□□ -0.69
COMMD2-203ENST00000473414 ITGAEP38570 1179 aa10.71□□□□□ -0.69
COMMD2-203ENST00000473414 IFT140Q96RY7 1462 aa10.7□□□□□ -0.7
COMMD2-203ENST00000473414 WIZO95785 1651 aa10.7□□□□□ -0.7
COMMD2-203ENST00000473414 SENP3Q9H4L4 574 aaPredicted RBP10.69□□□□□ -0.7
COMMD2-203ENST00000473414 AEBP2Q6ZN18 517 aaPredicted RBP10.63□□□□□ -0.71
COMMD2-203ENST00000473414 ZNF777Q9ULD5 760 aaPredicted RBP10.63□□□□□ -0.71
COMMD2-203ENST00000473414 DNMBPQ6XZF7 1577 aa10.62□□□□□ -0.71
COMMD2-203ENST00000473414 CCDC88BA6NC98 1476 aa10.61□□□□□ -0.71
COMMD2-203ENST00000473414 AQRO60306 1485 aaKnown RBP eCLIP10.6□□□□□ -0.71
COMMD2-203ENST00000473414 URB2Q14146 1524 aaKnown RBP10.58□□□□□ -0.72
COMMD2-203ENST00000473414 SOGA1O94964 1423 aa10.57□□□□□ -0.72
COMMD2-203ENST00000473414 ARID4BQ4LE39 1312 aaPredicted RBP10.56□□□□□ -0.72
COMMD2-203ENST00000473414 MLECQ14165 292 aa10.56□□□□□ -0.72
COMMD2-203ENST00000473414 TOPBP1Q92547 1522 aa10.54□□□□□ -0.72
COMMD2-203ENST00000473414 RAD54L2Q9Y4B4 1467 aa10.53□□□□□ -0.72
COMMD2-203ENST00000473414 CSRNP3Q8WYN3 585 aa10.52□□□□□ -0.73
COMMD2-203ENST00000473414 HRCP23327 699 aa10.5□□□□□ -0.73
COMMD2-203ENST00000473414 EIF4G3O43432 1585 aaKnown RBP10.48□□□□□ -0.73
COMMD2-203ENST00000473414 WRNQ14191 1432 aaPredicted RBP eCLIP10.47□□□□□ -0.73
COMMD2-203ENST00000473414 TARBP1Q13395 1621 aaKnown RBP10.47□□□□□ -0.73
COMMD2-203ENST00000473414 MAGI1Q96QZ7 1491 aaPredicted RBP10.47□□□□□ -0.73
COMMD2-203ENST00000473414 JPH4Q96JJ6 628 aa10.47□□□□□ -0.73
COMMD2-203ENST00000473414 RIMBP3CA6NJZ7 1639 aa10.46□□□□□ -0.73
COMMD2-203ENST00000473414 RIMBP3BA6NNM3 1639 aa10.46□□□□□ -0.73
COMMD2-203ENST00000473414 RIMBP3Q9UFD9 1639 aa10.46□□□□□ -0.73
COMMD2-203ENST00000473414 SYNJ1O43426 1573 aa10.46□□□□□ -0.74
COMMD2-203ENST00000473414 FAM69CQ0P6D2 419 aa10.46□□□□□ -0.74
COMMD2-203ENST00000473414 ESF1Q9H501 851 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms