RNA–Protein interactions for RNA: ENST00000472617.5

C1orf35-204, Transcript of chromosome 1 open reading frame 35, humanhuman

TSL 2

Gene C1orf35, Length 3,554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf35-204ENST00000472617 IGF1RP08069 1367 aa20.45■□□□□ 0.86
C1orf35-204ENST00000472617 KIF21BO75037 1637 aa20.44■□□□□ 0.86
C1orf35-204ENST00000472617 ARID3CA6NKF2 412 aa20.42■□□□□ 0.86
C1orf35-204ENST00000472617 BIVM-ERCC5R4GMW8 1640 aa20.4■□□□□ 0.86
C1orf35-204ENST00000472617 FAM50AQ14320 339 aaKnown RBP20.39■□□□□ 0.86
C1orf35-204ENST00000472617 KCNH8Q96L42 1107 aa20.39■□□□□ 0.86
C1orf35-204ENST00000472617 PRXQ9BXM0 1461 aa20.37■□□□□ 0.85
C1orf35-204ENST00000472617 IRX6P78412 446 aaPredicted RBP20.36■□□□□ 0.85
C1orf35-204ENST00000472617 TRIM52Q96A61 297 aa20.34■□□□□ 0.85
C1orf35-204ENST00000472617 TOPBP1Q92547 1522 aa20.33■□□□□ 0.85
C1orf35-204ENST00000472617 ERCC6Q03468 1493 aa20.31■□□□□ 0.84
C1orf35-204ENST00000472617 POLA1P09884 1462 aaPredicted RBP20.31■□□□□ 0.84
C1orf35-204ENST00000472617 HIRIP3Q9BW71 556 aaPredicted RBP20.28■□□□□ 0.84
C1orf35-204ENST00000472617 PRKCSHP14314 528 aaPredicted RBP20.27■□□□□ 0.84
C1orf35-204ENST00000472617 NBR1Q14596 966 aa20.26■□□□□ 0.83
C1orf35-204ENST00000472617 RBM19Q9Y4C8 960 aaKnown RBP20.26■□□□□ 0.83
C1orf35-204ENST00000472617 ERICH3Q5RHP9 1530 aa20.25■□□□□ 0.83
C1orf35-204ENST00000472617 CNGB1Q14028 1251 aaPredicted RBP20.25■□□□□ 0.83
C1orf35-204ENST00000472617 ARAP1Q96P48 1450 aa20.25■□□□□ 0.83
C1orf35-204ENST00000472617 DNMBPQ6XZF7 1577 aa20.23■□□□□ 0.83
C1orf35-204ENST00000472617 LAMC3Q9Y6N6 1575 aa20.21■□□□□ 0.83
C1orf35-204ENST00000472617 RTN4Q9NQC3 1192 aaKnown RBP20.19■□□□□ 0.82
C1orf35-204ENST00000472617 URB2Q14146 1524 aaKnown RBP20.19■□□□□ 0.82
C1orf35-204ENST00000472617 FHOD3Q2V2M9 1422 aa20.18■□□□□ 0.82
C1orf35-204ENST00000472617 GAPVD1Q14C86 1478 aa20.17■□□□□ 0.82
C1orf35-204ENST00000472617 CHMP7Q8WUX9 453 aaPredicted RBP20.16■□□□□ 0.82
C1orf35-204ENST00000472617 DDX10Q13206 875 aaKnown RBP20.16■□□□□ 0.82
C1orf35-204ENST00000472617 ARHGAP35Q9NRY4 1499 aa20.15■□□□□ 0.82
C1orf35-204ENST00000472617 AQRO60306 1485 aaKnown RBP eCLIP20.15■□□□□ 0.823e-7■■■■■ 38.6
C1orf35-204ENST00000472617 CCDC136Q96JN2 1154 aa20.13■□□□□ 0.81
C1orf35-204ENST00000472617 PRDM2Q13029 1718 aa20.11■□□□□ 0.81
C1orf35-204ENST00000472617 ABCA10Q8WWZ4 1543 aa20.11■□□□□ 0.81
C1orf35-204ENST00000472617 MTUS2Q5JR59 1369 aa20.09■□□□□ 0.81
C1orf35-204ENST00000472617 FHAD1B1AJZ9 1412 aa20.08■□□□□ 0.81
C1orf35-204ENST00000472617 ANO8Q9HCE9 1232 aaPredicted RBP20.06■□□□□ 0.8
C1orf35-204ENST00000472617 CCNB3Q8WWL7 1395 aa20.05■□□□□ 0.8
C1orf35-204ENST00000472617 SENP3-EIF4A1A0A087X0R7 540 aa20.01■□□□□ 0.79
C1orf35-204ENST00000472617 MRC2Q9UBG0 1479 aa20.01■□□□□ 0.79
C1orf35-204ENST00000472617 CLSPNQ9HAW4 1339 aa20■□□□□ 0.79
C1orf35-204ENST00000472617 KIF21AQ7Z4S6 1674 aa19.99■□□□□ 0.79
C1orf35-204ENST00000472617 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.99■□□□□ 0.79
C1orf35-204ENST00000472617 CDK11AQ9UQ88 783 aaPredicted RBP19.99■□□□□ 0.79
C1orf35-204ENST00000472617 DEKP35659 375 aaKnown RBP19.97■□□□□ 0.79
C1orf35-204ENST00000472617 CHIC2Q9UKJ5 165 aa19.95■□□□□ 0.78
C1orf35-204ENST00000472617 SIN3AQ96ST3 1273 aa19.95■□□□□ 0.78
C1orf35-204ENST00000472617 MSH5O43196 834 aa19.94■□□□□ 0.78
C1orf35-204ENST00000472617 EIF5BO60841 1220 aaKnown RBP19.93■□□□□ 0.78
C1orf35-204ENST00000472617 FMN1Q68DA7 1419 aa19.92■□□□□ 0.78
C1orf35-204ENST00000472617 DHX57Q6P158 1386 aaKnown RBP19.91■□□□□ 0.78
C1orf35-204ENST00000472617 PHLDB1Q86UU1 1377 aa19.9■□□□□ 0.78
C1orf35-204ENST00000472617 ZNF608Q9ULD9 1512 aaPredicted RBP19.89■□□□□ 0.78
C1orf35-204ENST00000472617 ZNF777Q9ULD5 760 aaPredicted RBP19.89■□□□□ 0.77
C1orf35-204ENST00000472617 RAB3GAP2Q9H2M9 1393 aa19.87■□□□□ 0.77
C1orf35-204ENST00000472617 GRIN2BQ13224 1484 aa19.86■□□□□ 0.77
C1orf35-204ENST00000472617 RRP7BPQ9NSQ0 103 aa19.84■□□□□ 0.77
C1orf35-204ENST00000472617 CUL7Q14999 1698 aa19.83■□□□□ 0.77
C1orf35-204ENST00000472617 LRRC9Q6ZRR7 1453 aa19.82■□□□□ 0.76
C1orf35-204ENST00000472617 HNRNPUQ00839 825 aaKnown RBP eCLIP19.82■□□□□ 0.76
C1orf35-204ENST00000472617 RTL5Q5HYW3 569 aaPredicted RBP19.82■□□□□ 0.76
C1orf35-204ENST00000472617 IFT140Q96RY7 1462 aa19.81■□□□□ 0.76
C1orf35-204ENST00000472617 NPM2Q86SE8 214 aaKnown RBP19.8■□□□□ 0.76
C1orf35-204ENST00000472617 ANP32CO43423 234 aa19.79■□□□□ 0.76
C1orf35-204ENST00000472617 SALL2Q9Y467 1007 aaPredicted RBP19.79■□□□□ 0.76
C1orf35-204ENST00000472617 SNAPC4Q5SXM2 1469 aa19.77■□□□□ 0.76
C1orf35-204ENST00000472617 RRBP1Q9P2E9 1410 aaKnown RBP19.77■□□□□ 0.76
C1orf35-204ENST00000472617 PCF11O94913 1555 aaKnown RBP19.77■□□□□ 0.76
C1orf35-204ENST00000472617 TIAM1Q13009 1591 aa19.77■□□□□ 0.76
C1orf35-204ENST00000472617 CASKIN1Q8WXD9 1431 aa19.77■□□□□ 0.75
C1orf35-204ENST00000472617 JPH4Q96JJ6 628 aa19.76■□□□□ 0.75
C1orf35-204ENST00000472617 EFCAB5A4FU69 1503 aa19.74■□□□□ 0.75
C1orf35-204ENST00000472617 B4GALNT3Q6L9W6 998 aa19.73■□□□□ 0.75
C1orf35-204ENST00000472617 SETD5Q9C0A6 1442 aa19.73■□□□□ 0.75
C1orf35-204ENST00000472617 FYCO1Q9BQS8 1478 aa19.71■□□□□ 0.75
C1orf35-204ENST00000472617 ABCA5Q8WWZ7 1642 aa19.7■□□□□ 0.74
C1orf35-204ENST00000472617 POLR3GLQ9BT43 218 aa19.69■□□□□ 0.74
C1orf35-204ENST00000472617 TARBP1Q13395 1621 aaKnown RBP19.67■□□□□ 0.74
C1orf35-204ENST00000472617 PLEKHD1A6NEE1 506 aa19.65■□□□□ 0.74
C1orf35-204ENST00000472617 CTTNBP2Q8WZ74 1663 aa19.64■□□□□ 0.74
C1orf35-204ENST00000472617 CFDP1Q9UEE9 299 aaPredicted RBP19.64■□□□□ 0.73
C1orf35-204ENST00000472617 IQGAP2Q13576 1575 aa19.63■□□□□ 0.73
C1orf35-204ENST00000472617 CARMIL2Q6F5E8 1435 aa19.62■□□□□ 0.73
C1orf35-204ENST00000472617 FAM9BQ8IZU0 186 aa19.62■□□□□ 0.73
C1orf35-204ENST00000472617 IL27Q8NEV9 243 aa19.62■□□□□ 0.73
C1orf35-204ENST00000472617 FOXD1Q16676 465 aa19.62■□□□□ 0.73
C1orf35-204ENST00000472617 FGD6Q6ZV73 1430 aa19.6■□□□□ 0.73
C1orf35-204ENST00000472617 WDR62O43379 1518 aa19.58■□□□□ 0.73
C1orf35-204ENST00000472617 MYT1LQ9UL68 1186 aa19.58■□□□□ 0.73
C1orf35-204ENST00000472617 GRIN2AQ12879 1464 aa19.58■□□□□ 0.73
C1orf35-204ENST00000472617 NCOA2Q15596 1464 aa19.58■□□□□ 0.73
C1orf35-204ENST00000472617 TONSLQ96HA7 1378 aa19.58■□□□□ 0.73
C1orf35-204ENST00000472617 LAS1LQ9Y4W2 734 aaKnown RBP19.58■□□□□ 0.72
C1orf35-204ENST00000472617 KIAA0586Q9BVV6 1533 aa19.56■□□□□ 0.72
C1orf35-204ENST00000472617 WDR97A6NE52 1622 aa19.56■□□□□ 0.72
C1orf35-204ENST00000472617 PBRM1Q86U86 1689 aa19.56■□□□□ 0.72
C1orf35-204ENST00000472617 CDK13Q14004 1512 aaKnown RBP19.56■□□□□ 0.72
C1orf35-204ENST00000472617 ADAMTS12P58397 1594 aa19.55■□□□□ 0.72
C1orf35-204ENST00000472617 PAK3O75914 559 aaPredicted RBP19.54■□□□□ 0.72
C1orf35-204ENST00000472617 ZNF644Q9H582 1327 aaPredicted RBP19.54■□□□□ 0.72
C1orf35-204ENST00000472617 MAP3K1Q13233 1512 aa19.54■□□□□ 0.72
C1orf35-204ENST00000472617 EIF4G3O43432 1585 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 196.5 ms