RNA–Protein interactions for RNA: ENST00000472617.5

C1orf35-204, Transcript of chromosome 1 open reading frame 35, humanhuman

TSL 2

Gene C1orf35, Length 3,554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf35-204ENST00000472617 NISCHQ9Y2I1 1504 aa28.47■■■□□ 2.15
C1orf35-204ENST00000472617 DCAF8L2P0C7V8 631 aa25.09■■□□□ 1.61
C1orf35-204ENST00000472617 SHROOM4Q9ULL8 1493 aa24.82■■□□□ 1.56
C1orf35-204ENST00000472617 SUPT5HO00267 1087 aaKnown RBP24.32■■□□□ 1.48
C1orf35-204ENST00000472617 CCDC180Q9P1Z9 1646 aa24.13■■□□□ 1.45
C1orf35-204ENST00000472617 ZCCHC6Q5VYS8 1495 aaKnown RBP23.86■■□□□ 1.41
C1orf35-204ENST00000472617 PPARGC1BQ86YN6 1023 aaKnown RBP23.82■■□□□ 1.4
C1orf35-204ENST00000472617 PCGF6Q9BYE7 350 aa23.74■■□□□ 1.39
C1orf35-204ENST00000472617 ABCC9O60706 1549 aa23.61■■□□□ 1.37
C1orf35-204ENST00000472617 HRCP23327 699 aa23.5■■□□□ 1.35
C1orf35-204ENST00000472617 SCRIBQ14160 1630 aa23.06■■□□□ 1.28
C1orf35-204ENST00000472617 DCAF1Q9Y4B6 1507 aa23.04■■□□□ 1.28
C1orf35-204ENST00000472617 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
C1orf35-204ENST00000472617 EHMT2Q96KQ7 1210 aa22.9■■□□□ 1.26
C1orf35-204ENST00000472617 PELP1Q8IZL8 1130 aaKnown RBP22.86■■□□□ 1.25
C1orf35-204ENST00000472617 PABPN1Q86U42 306 aaKnown RBP eCLIP22.73■■□□□ 1.23
C1orf35-204ENST00000472617 NACADO15069 1562 aa22.69■■□□□ 1.22
C1orf35-204ENST00000472617 LOC105371045A0A1W2PR82 267 aa22.67■■□□□ 1.22
C1orf35-204ENST00000472617 MYO15BQ96JP2 1530 aa22.66■■□□□ 1.22
C1orf35-204ENST00000472617 FAM9AQ8IZU1 332 aaPredicted RBP22.65■■□□□ 1.22
C1orf35-204ENST00000472617 SCAF1Q9H7N4 1312 aaKnown RBP22.61■■□□□ 1.21
C1orf35-204ENST00000472617 RB1CC1Q8TDY2 1594 aa22.57■■□□□ 1.2
C1orf35-204ENST00000472617 TRIM41Q8WV44 630 aa22.45■■□□□ 1.19
C1orf35-204ENST00000472617 RSF1Q96T23 1441 aaPredicted RBP22.45■■□□□ 1.18
C1orf35-204ENST00000472617 CECR2Q9BXF3 1484 aa22.4■■□□□ 1.18
C1orf35-204ENST00000472617 TRIM26Q12899 539 aaPredicted RBP22.28■■□□□ 1.16
C1orf35-204ENST00000472617 TTBK1Q5TCY1 1321 aaPredicted RBP22.24■■□□□ 1.15
C1orf35-204ENST00000472617 YTHDC1Q96MU7 727 aaKnown RBP22.23■■□□□ 1.15
C1orf35-204ENST00000472617 GTF3C3Q9Y5Q9 886 aa22.18■■□□□ 1.14
C1orf35-204ENST00000472617 MROH2BQ7Z745 1585 aa22.17■■□□□ 1.14
C1orf35-204ENST00000472617 NEUROD1Q13562 356 aa22.07■■□□□ 1.12
C1orf35-204ENST00000472617 ZEB1P37275 1124 aaPredicted RBP22■■□□□ 1.11
C1orf35-204ENST00000472617 WIZO95785 1651 aa21.98■■□□□ 1.11
C1orf35-204ENST00000472617 BAZ1AQ9NRL2 1556 aaPredicted RBP21.98■■□□□ 1.11
C1orf35-204ENST00000472617 ACIN1Q9UKV3 1341 aaKnown RBP21.91■■□□□ 1.1
C1orf35-204ENST00000472617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.91■■□□□ 1.1
C1orf35-204ENST00000472617 CENPBP07199 599 aaPredicted RBP21.89■■□□□ 1.1
C1orf35-204ENST00000472617 MYT1Q01538 1121 aa21.89■■□□□ 1.1
C1orf35-204ENST00000472617 CCER1Q8TC90 406 aaPredicted RBP21.89■■□□□ 1.09
C1orf35-204ENST00000472617 UNC13AQ9UPW8 1703 aa21.74■■□□□ 1.07
C1orf35-204ENST00000472617 SMARCA4P51532 1647 aa21.73■■□□□ 1.07
C1orf35-204ENST00000472617 DIEXFQ68CQ4 756 aaKnown RBP21.69■■□□□ 1.06
C1orf35-204ENST00000472617 RANGAP1P46060 587 aaPredicted RBP21.68■■□□□ 1.06
C1orf35-204ENST00000472617 UBTFP17480 764 aaKnown RBP21.65■■□□□ 1.06
C1orf35-204ENST00000472617 CCDC88BA6NC98 1476 aa21.64■■□□□ 1.06
C1orf35-204ENST00000472617 BICRAQ9NZM4 1560 aa21.64■■□□□ 1.06
C1orf35-204ENST00000472617 TOP2AP11388 1531 aaKnown RBP21.58■■□□□ 1.05
C1orf35-204ENST00000472617 BAZ1BQ9UIG0 1483 aaKnown RBP21.57■■□□□ 1.04
C1orf35-204ENST00000472617 ABCC8Q09428 1581 aa21.49■■□□□ 1.03
C1orf35-204ENST00000472617 ATAD2BQ9ULI0 1458 aa21.46■■□□□ 1.03
C1orf35-204ENST00000472617 SMARCA2P51531 1590 aa21.41■■□□□ 1.02
C1orf35-204ENST00000472617 CSRNP3Q8WYN3 585 aa21.37■■□□□ 1.01
C1orf35-204ENST00000472617 SOGA1O94964 1423 aa21.31■■□□□ 1
C1orf35-204ENST00000472617 WRNQ14191 1432 aaPredicted RBP eCLIP21.31■■□□□ 1
C1orf35-204ENST00000472617 EIF4G1Q04637 1599 aaKnown RBP21.22■□□□□ 0.99
C1orf35-204ENST00000472617 APLP2Q06481 763 aa21.21■□□□□ 0.99
C1orf35-204ENST00000472617 BCANQ96GW7 911 aa21.21■□□□□ 0.99
C1orf35-204ENST00000472617 RUSC2Q8N2Y8 1516 aa21.19■□□□□ 0.98
C1orf35-204ENST00000472617 BCL11AQ9H165 835 aa21.12■□□□□ 0.97
C1orf35-204ENST00000472617 MIER1Q8N108 512 aa21.1■□□□□ 0.97
C1orf35-204ENST00000472617 NCAPD3P42695 1498 aa21.05■□□□□ 0.96
C1orf35-204ENST00000472617 PEG3Q9GZU2 1588 aa21.04■□□□□ 0.96
C1orf35-204ENST00000472617 HNRNPUL2Q1KMD3 747 aaKnown RBP21.03■□□□□ 0.96
C1orf35-204ENST00000472617 CEP162Q5TB80 1403 aa21.03■□□□□ 0.96
C1orf35-204ENST00000472617 EEA1Q15075 1411 aa20.98■□□□□ 0.95
C1orf35-204ENST00000472617 ATP1B4Q9UN42 357 aaPredicted RBP20.98■□□□□ 0.95
C1orf35-204ENST00000472617 ZNF316A6NFI3 1004 aaPredicted RBP20.96■□□□□ 0.95
C1orf35-204ENST00000472617 GOLGA3Q08378 1498 aa20.91■□□□□ 0.94
C1orf35-204ENST00000472617 SYNJ1O43426 1573 aa20.9■□□□□ 0.94
C1orf35-204ENST00000472617 TNIKQ9UKE5 1360 aa20.88■□□□□ 0.93
C1orf35-204ENST00000472617 CC2D2AQ9P2K1 1620 aa20.87■□□□□ 0.93
C1orf35-204ENST00000472617 HMGXB3Q12766 1538 aa20.87■□□□□ 0.93
C1orf35-204ENST00000472617 CADPSQ9ULU8 1353 aa20.86■□□□□ 0.93
C1orf35-204ENST00000472617 CEP164Q9UPV0 1460 aa20.82■□□□□ 0.92
C1orf35-204ENST00000472617 CLIP1P30622 1438 aa20.8■□□□□ 0.92
C1orf35-204ENST00000472617 DNAJC5BQ9UF47 199 aa20.79■□□□□ 0.92
C1orf35-204ENST00000472617 ANP32EQ9BTT0 268 aa20.79■□□□□ 0.92
C1orf35-204ENST00000472617 P3H3Q8IVL6 736 aa20.78■□□□□ 0.92
C1orf35-204ENST00000472617 KIF27Q86VH2 1401 aa20.77■□□□□ 0.92
C1orf35-204ENST00000472617 ITGAEP38570 1179 aa20.77■□□□□ 0.92
C1orf35-204ENST00000472617 CFTRP13569 1480 aa20.75■□□□□ 0.91
C1orf35-204ENST00000472617 RAPGEF2Q9Y4G8 1499 aa20.73■□□□□ 0.91
C1orf35-204ENST00000472617 ERICH6Q7L0X2 663 aa20.72■□□□□ 0.91
C1orf35-204ENST00000472617 CUX2O14529 1486 aa20.72■□□□□ 0.91
C1orf35-204ENST00000472617 NESP48681 1621 aa20.67■□□□□ 0.9
C1orf35-204ENST00000472617 SUPT16HQ9Y5B9 1047 aaKnown RBP20.66■□□□□ 0.9
C1orf35-204ENST00000472617 FANCD2Q9BXW9 1451 aa20.65■□□□□ 0.9
C1orf35-204ENST00000472617 CUX1P39880 1505 aa20.64■□□□□ 0.9
C1orf35-204ENST00000472617 TOP2BQ02880 1626 aa20.62■□□□□ 0.89
C1orf35-204ENST00000472617 TSHZ2Q9NRE2 1034 aa20.62■□□□□ 0.89
C1orf35-204ENST00000472617 FKBP8Q14318 412 aa20.56■□□□□ 0.88
C1orf35-204ENST00000472617 FGD5Q6ZNL6 1462 aa20.55■□□□□ 0.88
C1orf35-204ENST00000472617 CARMIL1Q5VZK9 1371 aa20.54■□□□□ 0.88
C1orf35-204ENST00000472617 TDRD9Q8NDG6 1382 aaKnown RBP20.51■□□□□ 0.87
C1orf35-204ENST00000472617 KANK4Q5T7N3 995 aaPredicted RBP20.5■□□□□ 0.87
C1orf35-204ENST00000472617 RAD54L2Q9Y4B4 1467 aa20.49■□□□□ 0.87
C1orf35-204ENST00000472617 PDS5BQ9NTI5 1447 aa20.48■□□□□ 0.87
C1orf35-204ENST00000472617 FBLN2P98095 1184 aa20.47■□□□□ 0.87
C1orf35-204ENST00000472617 NEFLP07196 543 aa20.46■□□□□ 0.87
C1orf35-204ENST00000472617 VPS8Q8N3P4 1428 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 287.1 ms