RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 TNIKQ9UKE5 1360 aa36.04■■■■□ 3.36
PAXBP1-208ENST00000472588 CTTNBP2Q8WZ74 1663 aa35.95■■■■□ 3.35
PAXBP1-208ENST00000472588 CLASP1Q7Z460 1538 aa35.89■■■■□ 3.34
PAXBP1-208ENST00000472588 NUP160Q12769 1436 aa35.85■■■■□ 3.33
PAXBP1-208ENST00000472588 CEP170Q5SW79 1584 aa35.82■■■■□ 3.32
PAXBP1-208ENST00000472588 KIAA0586Q9BVV6 1533 aa35.81■■■■□ 3.32
PAXBP1-208ENST00000472588 RIMBP3CA6NJZ7 1639 aa35.78■■■■□ 3.32
PAXBP1-208ENST00000472588 RIMBP3BA6NNM3 1639 aa35.78■■■■□ 3.32
PAXBP1-208ENST00000472588 RIMBP3Q9UFD9 1639 aa35.78■■■■□ 3.32
PAXBP1-208ENST00000472588 IQGAP2Q13576 1575 aa35.77■■■■□ 3.32
PAXBP1-208ENST00000472588 ARHGEF11O15085 1522 aa35.75■■■■□ 3.31
PAXBP1-208ENST00000472588 CEP162Q5TB80 1403 aa35.74■■■■□ 3.31
PAXBP1-208ENST00000472588 CLIP1P30622 1438 aa35.66■■■■□ 3.3
PAXBP1-208ENST00000472588 RANGAP1P46060 587 aaPredicted RBP35.62■■■■□ 3.29
PAXBP1-208ENST00000472588 EFCAB5A4FU69 1503 aa35.59■■■■□ 3.29
PAXBP1-208ENST00000472588 UGGT2Q9NYU1 1516 aa35.59■■■■□ 3.29
PAXBP1-208ENST00000472588 SHROOM2Q13796 1616 aa35.54■■■■□ 3.28
PAXBP1-208ENST00000472588 JPH4Q96JJ6 628 aa35.54■■■■□ 3.28
PAXBP1-208ENST00000472588 ARHGAP35Q9NRY4 1499 aa35.5■■■■□ 3.27
PAXBP1-208ENST00000472588 SAMD9Q5K651 1589 aa35.5■■■■□ 3.27
PAXBP1-208ENST00000472588 ARAP1Q96P48 1450 aa35.48■■■■□ 3.27
PAXBP1-208ENST00000472588 CARMIL2Q6F5E8 1435 aa35.44■■■■□ 3.26
PAXBP1-208ENST00000472588 ERCC6L2Q5T890 1561 aa35.43■■■■□ 3.26
PAXBP1-208ENST00000472588 KIAA0556O60303 1618 aa35.39■■■■□ 3.26
PAXBP1-208ENST00000472588 DISP1Q96F81 1524 aa35.38■■■■□ 3.25
PAXBP1-208ENST00000472588 CYB5RLQ6IPT4 315 aa35.37■■■■□ 3.25
PAXBP1-208ENST00000472588 PRG4Q92954 1404 aaPredicted RBP35.36■■■■□ 3.25
PAXBP1-208ENST00000472588 P3H3Q8IVL6 736 aa35.34■■■■□ 3.25
PAXBP1-208ENST00000472588 FHOD3Q2V2M9 1422 aa35.3■■■■□ 3.24
PAXBP1-208ENST00000472588 VPS8Q8N3P4 1428 aa35.26■■■■□ 3.24
PAXBP1-208ENST00000472588 FMN1Q68DA7 1419 aa35.26■■■■□ 3.23
PAXBP1-208ENST00000472588 PTPRGP23470 1445 aa35.1■■■■□ 3.21
PAXBP1-208ENST00000472588 CASKIN1Q8WXD9 1431 aa35.06■■■■□ 3.2
PAXBP1-208ENST00000472588 FYCO1Q9BQS8 1478 aa35.04■■■■□ 3.2
PAXBP1-208ENST00000472588 TTBK1Q5TCY1 1321 aaPredicted RBP35.04■■■■□ 3.2
PAXBP1-208ENST00000472588 PCF11O94913 1555 aaKnown RBP35.01■■■■□ 3.2
PAXBP1-208ENST00000472588 APLP2Q06481 763 aa34.98■■■■□ 3.19
PAXBP1-208ENST00000472588 RAPGEF6Q8TEU7 1601 aa34.97■■■■□ 3.19
PAXBP1-208ENST00000472588 HECW1Q76N89 1606 aa34.95■■■■□ 3.19
PAXBP1-208ENST00000472588 ATP1B4Q9UN42 357 aaPredicted RBP34.93■■■■□ 3.18
PAXBP1-208ENST00000472588 ABCA8O94911 1581 aa34.92■■■■□ 3.18
PAXBP1-208ENST00000472588 PLB1Q6P1J6 1458 aa34.91■■■■□ 3.18
PAXBP1-208ENST00000472588 UACAQ9BZF9 1416 aa34.89■■■■□ 3.18
PAXBP1-208ENST00000472588 MAP3K1Q13233 1512 aa34.85■■■■□ 3.17
PAXBP1-208ENST00000472588 CCDC18Q5T9S5 1454 aa34.84■■■■□ 3.17
PAXBP1-208ENST00000472588 ADCY10Q96PN6 1610 aa34.84■■■■□ 3.17
PAXBP1-208ENST00000472588 ABCC2Q92887 1545 aa34.81■■■■□ 3.16
PAXBP1-208ENST00000472588 NUP153P49790 1475 aaKnown RBP34.8■■■■□ 3.16
PAXBP1-208ENST00000472588 UHRF1BP1LA0JNW5 1464 aa34.8■■■■□ 3.16
PAXBP1-208ENST00000472588 EPRSP07814 1512 aaKnown RBP34.78■■■■□ 3.16
PAXBP1-208ENST00000472588 TIAM1Q13009 1591 aa34.77■■■■□ 3.16
PAXBP1-208ENST00000472588 CFAP43Q8NDM7 1665 aa34.77■■■■□ 3.16
PAXBP1-208ENST00000472588 LRRIQ1Q96JM4 1722 aa34.77■■■■□ 3.16
PAXBP1-208ENST00000472588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.66■■■■□ 3.14
PAXBP1-208ENST00000472588 HNRNPUL2Q1KMD3 747 aaKnown RBP34.66■■■■□ 3.14
PAXBP1-208ENST00000472588 CDK11AQ9UQ88 783 aaPredicted RBP34.66■■■■□ 3.14
PAXBP1-208ENST00000472588 CDK13Q14004 1512 aaKnown RBP34.66■■■■□ 3.14
PAXBP1-208ENST00000472588 NPM1P06748 294 aaKnown RBP eCLIP34.64■■■■□ 3.14
PAXBP1-208ENST00000472588 ATP10BO94823 1461 aa34.64■■■■□ 3.14
PAXBP1-208ENST00000472588 KDM5BQ9UGL1 1544 aa34.62■■■■□ 3.13
PAXBP1-208ENST00000472588 ARID3CA6NKF2 412 aa34.62■■■■□ 3.13
PAXBP1-208ENST00000472588 TRHP20396 242 aaPredicted RBP34.62■■■■□ 3.13
PAXBP1-208ENST00000472588 LRRC9Q6ZRR7 1453 aa34.61■■■■□ 3.13
PAXBP1-208ENST00000472588 MAPKBP1O60336 1514 aa34.58■■■■□ 3.13
PAXBP1-208ENST00000472588 MTUS2Q5JR59 1369 aa34.57■■■■□ 3.12
PAXBP1-208ENST00000472588 KANK4Q5T7N3 995 aaPredicted RBP34.56■■■■□ 3.12
PAXBP1-208ENST00000472588 ZCCHC11Q5TAX3 1644 aaKnown RBP34.55■■■■□ 3.12
PAXBP1-208ENST00000472588 EHBP1L1Q8N3D4 1523 aa34.54■■■■□ 3.12
PAXBP1-208ENST00000472588 PLEKHD1A6NEE1 506 aa34.53■■■■□ 3.12
PAXBP1-208ENST00000472588 PPARGC1BQ86YN6 1023 aaKnown RBP34.52■■■■□ 3.12
PAXBP1-208ENST00000472588 MAGI3Q5TCQ9 1506 aa34.46■■■■□ 3.11
PAXBP1-208ENST00000472588 KIF13AQ9H1H9 1805 aa34.45■■■■□ 3.11
PAXBP1-208ENST00000472588 TROQ12816 1431 aaPredicted RBP34.45■■■■□ 3.11
PAXBP1-208ENST00000472588 SUPT6HQ7KZ85 1726 aaKnown RBP34.42■■■■□ 3.1
PAXBP1-208ENST00000472588 ABCC10Q5T3U5 1492 aa34.39■■■■□ 3.1
PAXBP1-208ENST00000472588 ASXL2Q76L83 1435 aa34.38■■■■□ 3.09
PAXBP1-208ENST00000472588 DIP2BQ9P265 1576 aa34.38■■■■□ 3.09
PAXBP1-208ENST00000472588 KIF14Q15058 1648 aa34.33■■■■□ 3.09
PAXBP1-208ENST00000472588 NCOA2Q15596 1464 aa34.31■■■■□ 3.08
PAXBP1-208ENST00000472588 WDR7Q9Y4E6 1490 aa34.31■■■■□ 3.08
PAXBP1-208ENST00000472588 FAM69CQ0P6D2 419 aa34.29■■■■□ 3.08
PAXBP1-208ENST00000472588 KCNH8Q96L42 1107 aa34.2■■■■□ 3.06
PAXBP1-208ENST00000472588 GLI2P10070 1586 aa34.19■■■■□ 3.06
PAXBP1-208ENST00000472588 PHLDB1Q86UU1 1377 aa34.18■■■■□ 3.06
PAXBP1-208ENST00000472588 CCNB3Q8WWL7 1395 aa34.17■■■■□ 3.06
PAXBP1-208ENST00000472588 TRIM26Q12899 539 aaPredicted RBP34.15■■■■□ 3.06
PAXBP1-208ENST00000472588 MYOM3Q5VTT5 1437 aa34.15■■■■□ 3.06
PAXBP1-208ENST00000472588 ITSN2Q9NZM3 1697 aa34.14■■■■□ 3.06
PAXBP1-208ENST00000472588 TSPOAP1O95153 1857 aa34.13■■■■□ 3.05
PAXBP1-208ENST00000472588 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.13■■■■□ 3.05
PAXBP1-208ENST00000472588 MIA2Q96PC5 1412 aa34.08■■■■□ 3.05
PAXBP1-208ENST00000472588 RRBP1Q9P2E9 1410 aaKnown RBP34.08■■■■□ 3.05
PAXBP1-208ENST00000472588 ABCA9Q8IUA7 1624 aa34.07■■■■□ 3.04
PAXBP1-208ENST00000472588 MAP3K4Q9Y6R4 1608 aa34.07■■■■□ 3.04
PAXBP1-208ENST00000472588 GPATCH8Q9UKJ3 1502 aaKnown RBP34.07■■■■□ 3.04
PAXBP1-208ENST00000472588 TTC37Q6PGP7 1564 aa34.06■■■■□ 3.04
PAXBP1-208ENST00000472588 CDC42BPAQ5VT25 1732 aa34.06■■■■□ 3.04
PAXBP1-208ENST00000472588 FGD6Q6ZV73 1430 aa34.06■■■■□ 3.04
PAXBP1-208ENST00000472588 MYO5CQ9NQX4 1742 aa34.05■■■■□ 3.04
PAXBP1-208ENST00000472588 PPRC1Q5VV67 1664 aaKnown RBP34.01■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms