RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 ARHGEF11O15085 1522 aa20.27■□□□□ 0.83
PRKCB-205ENST00000472066 KIF21BO75037 1637 aa20.25■□□□□ 0.83
PRKCB-205ENST00000472066 EHMT2Q96KQ7 1210 aa20.24■□□□□ 0.83
PRKCB-205ENST00000472066 SHROOM2Q13796 1616 aa20.23■□□□□ 0.83
PRKCB-205ENST00000472066 PRG4Q92954 1404 aaPredicted RBP20.22■□□□□ 0.83
PRKCB-205ENST00000472066 RIMBP3CA6NJZ7 1639 aa20.22■□□□□ 0.83
PRKCB-205ENST00000472066 RIMBP3BA6NNM3 1639 aa20.22■□□□□ 0.83
PRKCB-205ENST00000472066 RIMBP3Q9UFD9 1639 aa20.22■□□□□ 0.83
PRKCB-205ENST00000472066 IQGAP2Q13576 1575 aa20.2■□□□□ 0.82
PRKCB-205ENST00000472066 GOLGA3Q08378 1498 aa20.19■□□□□ 0.82
PRKCB-205ENST00000472066 UBTFP17480 764 aaKnown RBP20.19■□□□□ 0.82
PRKCB-205ENST00000472066 ERCC6L2Q5T890 1561 aa20.17■□□□□ 0.82
PRKCB-205ENST00000472066 CYB5RLQ6IPT4 315 aa20.15■□□□□ 0.82
PRKCB-205ENST00000472066 UGGT2Q9NYU1 1516 aa20.13■□□□□ 0.81
PRKCB-205ENST00000472066 ARAP1Q96P48 1450 aa20.13■□□□□ 0.81
PRKCB-205ENST00000472066 CTTNBP2Q8WZ74 1663 aa20.13■□□□□ 0.81
PRKCB-205ENST00000472066 CARMIL2Q6F5E8 1435 aa20.11■□□□□ 0.81
PRKCB-205ENST00000472066 DISP1Q96F81 1524 aa20.09■□□□□ 0.81
PRKCB-205ENST00000472066 RANGAP1P46060 587 aaPredicted RBP20.07■□□□□ 0.8
PRKCB-205ENST00000472066 TNIKQ9UKE5 1360 aa20.05■□□□□ 0.8
PRKCB-205ENST00000472066 LOC105371045A0A1W2PR82 267 aa20.03■□□□□ 0.8
PRKCB-205ENST00000472066 PTPRGP23470 1445 aa20.02■□□□□ 0.8
PRKCB-205ENST00000472066 P3H3Q8IVL6 736 aa20.02■□□□□ 0.8
PRKCB-205ENST00000472066 TTBK1Q5TCY1 1321 aaPredicted RBP20.02■□□□□ 0.79
PRKCB-205ENST00000472066 KIAA0556O60303 1618 aa20■□□□□ 0.79
PRKCB-205ENST00000472066 SAMD9Q5K651 1589 aa19.95■□□□□ 0.78
PRKCB-205ENST00000472066 EFCAB5A4FU69 1503 aa19.92■□□□□ 0.78
PRKCB-205ENST00000472066 FHOD3Q2V2M9 1422 aa19.89■□□□□ 0.77
PRKCB-205ENST00000472066 ARHGAP35Q9NRY4 1499 aa19.89■□□□□ 0.77
PRKCB-205ENST00000472066 UACAQ9BZF9 1416 aa19.88■□□□□ 0.77
PRKCB-205ENST00000472066 CLIP1P30622 1438 aa19.85■□□□□ 0.77
PRKCB-205ENST00000472066 NPM1P06748 294 aaKnown RBP eCLIP19.84■□□□□ 0.77
PRKCB-205ENST00000472066 UHRF1BP1LA0JNW5 1464 aa19.84■□□□□ 0.77
PRKCB-205ENST00000472066 PLB1Q6P1J6 1458 aa19.84■□□□□ 0.77
PRKCB-205ENST00000472066 ADCY10Q96PN6 1610 aa19.82■□□□□ 0.76
PRKCB-205ENST00000472066 CEP162Q5TB80 1403 aa19.81■□□□□ 0.76
PRKCB-205ENST00000472066 ABCA8O94911 1581 aa19.8■□□□□ 0.76
PRKCB-205ENST00000472066 ABCC2Q92887 1545 aa19.8■□□□□ 0.76
PRKCB-205ENST00000472066 FMN1Q68DA7 1419 aa19.76■□□□□ 0.75
PRKCB-205ENST00000472066 KDM5BQ9UGL1 1544 aa19.74■□□□□ 0.75
PRKCB-205ENST00000472066 ARID3CA6NKF2 412 aa19.71■□□□□ 0.75
PRKCB-205ENST00000472066 RAPGEF6Q8TEU7 1601 aa19.71■□□□□ 0.75
PRKCB-205ENST00000472066 ATP1B4Q9UN42 357 aaPredicted RBP19.7■□□□□ 0.74
PRKCB-205ENST00000472066 ATP10BO94823 1461 aa19.68■□□□□ 0.74
PRKCB-205ENST00000472066 NUP153P49790 1475 aaKnown RBP19.68■□□□□ 0.74
PRKCB-205ENST00000472066 MAPKBP1O60336 1514 aa19.67■□□□□ 0.74
PRKCB-205ENST00000472066 TRHP20396 242 aaPredicted RBP19.66■□□□□ 0.74
PRKCB-205ENST00000472066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.65■□□□□ 0.74
PRKCB-205ENST00000472066 HNRNPUL2Q1KMD3 747 aaKnown RBP19.65■□□□□ 0.74
PRKCB-205ENST00000472066 ASXL2Q76L83 1435 aa19.65■□□□□ 0.74
PRKCB-205ENST00000472066 ZCCHC11Q5TAX3 1644 aaKnown RBP19.65■□□□□ 0.74
PRKCB-205ENST00000472066 CASKIN1Q8WXD9 1431 aa19.64■□□□□ 0.73
PRKCB-205ENST00000472066 HECW1Q76N89 1606 aa19.58■□□□□ 0.73
PRKCB-205ENST00000472066 EPRSP07814 1512 aaKnown RBP19.58■□□□□ 0.73
PRKCB-205ENST00000472066 FAM69CQ0P6D2 419 aa19.58■□□□□ 0.72
PRKCB-205ENST00000472066 ABCC10Q5T3U5 1492 aa19.58■□□□□ 0.72
PRKCB-205ENST00000472066 FYCO1Q9BQS8 1478 aa19.58■□□□□ 0.72
PRKCB-205ENST00000472066 PCF11O94913 1555 aaKnown RBP19.57■□□□□ 0.72
PRKCB-205ENST00000472066 PLEKHD1A6NEE1 506 aa19.57■□□□□ 0.72
PRKCB-205ENST00000472066 WDR7Q9Y4E6 1490 aa19.56■□□□□ 0.72
PRKCB-205ENST00000472066 KCNH8Q96L42 1107 aa19.56■□□□□ 0.72
PRKCB-205ENST00000472066 CDK13Q14004 1512 aaKnown RBP19.56■□□□□ 0.72
PRKCB-205ENST00000472066 VPS8Q8N3P4 1428 aa19.55■□□□□ 0.72
PRKCB-205ENST00000472066 CDK11AQ9UQ88 783 aaPredicted RBP19.53■□□□□ 0.72
PRKCB-205ENST00000472066 CCDC18Q5T9S5 1454 aa19.52■□□□□ 0.72
PRKCB-205ENST00000472066 DIP2BQ9P265 1576 aa19.5■□□□□ 0.71
PRKCB-205ENST00000472066 GLI2P10070 1586 aa19.47■□□□□ 0.71
PRKCB-205ENST00000472066 LRRIQ1Q96JM4 1722 aa19.45■□□□□ 0.7
PRKCB-205ENST00000472066 KIF13AQ9H1H9 1805 aa19.43■□□□□ 0.7
PRKCB-205ENST00000472066 TROQ12816 1431 aaPredicted RBP19.42■□□□□ 0.7
PRKCB-205ENST00000472066 CD109Q6YHK3 1445 aa19.4■□□□□ 0.7
PRKCB-205ENST00000472066 MAGI3Q5TCQ9 1506 aa19.39■□□□□ 0.69
PRKCB-205ENST00000472066 MTUS2Q5JR59 1369 aa19.37■□□□□ 0.69
PRKCB-205ENST00000472066 APLP2Q06481 763 aa19.37■□□□□ 0.69
PRKCB-205ENST00000472066 MAP3K4Q9Y6R4 1608 aa19.36■□□□□ 0.69
PRKCB-205ENST00000472066 MAP3K1Q13233 1512 aa19.35■□□□□ 0.69
PRKCB-205ENST00000472066 ABCA9Q8IUA7 1624 aa19.35■□□□□ 0.69
PRKCB-205ENST00000472066 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.35■□□□□ 0.69
PRKCB-205ENST00000472066 TIAM1Q13009 1591 aa19.34■□□□□ 0.69
PRKCB-205ENST00000472066 KANK4Q5T7N3 995 aaPredicted RBP19.33■□□□□ 0.68
PRKCB-205ENST00000472066 CFAP43Q8NDM7 1665 aa19.32■□□□□ 0.68
PRKCB-205ENST00000472066 KIF14Q15058 1648 aa19.31■□□□□ 0.68
PRKCB-205ENST00000472066 LRRC9Q6ZRR7 1453 aa19.3■□□□□ 0.68
PRKCB-205ENST00000472066 TEX14Q8IWB6 1497 aa19.28■□□□□ 0.68
PRKCB-205ENST00000472066 TTC37Q6PGP7 1564 aa19.28■□□□□ 0.68
PRKCB-205ENST00000472066 PLCH2O75038 1416 aa19.28■□□□□ 0.68
PRKCB-205ENST00000472066 EHBP1L1Q8N3D4 1523 aa19.28■□□□□ 0.68
PRKCB-205ENST00000472066 PPRC1Q5VV67 1664 aaKnown RBP19.27■□□□□ 0.68
PRKCB-205ENST00000472066 TSPOAP1O95153 1857 aa19.27■□□□□ 0.68
PRKCB-205ENST00000472066 EFCAB2Q5VUJ9 269 aa19.24■□□□□ 0.67
PRKCB-205ENST00000472066 CCNB3Q8WWL7 1395 aa19.22■□□□□ 0.67
PRKCB-205ENST00000472066 PHLDB1Q86UU1 1377 aa19.21■□□□□ 0.67
PRKCB-205ENST00000472066 FANCAO15360 1455 aa19.21■□□□□ 0.67
PRKCB-205ENST00000472066 NCOA2Q15596 1464 aa19.21■□□□□ 0.67
PRKCB-205ENST00000472066 GPATCH8Q9UKJ3 1502 aaKnown RBP19.2■□□□□ 0.66
PRKCB-205ENST00000472066 NEO1Q92859 1461 aa19.2■□□□□ 0.66
PRKCB-205ENST00000472066 ARAP3Q8WWN8 1544 aa19.2■□□□□ 0.66
PRKCB-205ENST00000472066 AKNAQ7Z591 1439 aa19.18■□□□□ 0.66
PRKCB-205ENST00000472066 CFDP1Q9UEE9 299 aaPredicted RBP19.18■□□□□ 0.66
PRKCB-205ENST00000472066 COL17A1Q9UMD9 1497 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms