RNA–Protein interactions for RNA: ENST00000471044.1

CCNL1-213, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-213ENST00000471044 TRHP20396 242 aaPredicted RBP22.09■■□□□ 1.13
CCNL1-213ENST00000471044 PBRM1Q86U86 1689 aa22.09■■□□□ 1.13
CCNL1-213ENST00000471044 TOP2BQ02880 1626 aa22.09■■□□□ 1.13
CCNL1-213ENST00000471044 SNAPC4Q5SXM2 1469 aa22.09■■□□□ 1.13
CCNL1-213ENST00000471044 ABCA10Q8WWZ4 1543 aa22.08■■□□□ 1.13
CCNL1-213ENST00000471044 GRIN2BQ13224 1484 aa22.08■■□□□ 1.12
CCNL1-213ENST00000471044 ARAP1Q96P48 1450 aa22.07■■□□□ 1.12
CCNL1-213ENST00000471044 MAGI1Q96QZ7 1491 aaPredicted RBP22.06■■□□□ 1.12
CCNL1-213ENST00000471044 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.122e-6■■■■□ 22.3
CCNL1-213ENST00000471044 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
CCNL1-213ENST00000471044 FBLN2P98095 1184 aa22.04■■□□□ 1.12
CCNL1-213ENST00000471044 ABCA5Q8WWZ7 1642 aa22.04■■□□□ 1.12
CCNL1-213ENST00000471044 GAPVD1Q14C86 1478 aa22.03■■□□□ 1.12
CCNL1-213ENST00000471044 SYNJ2O15056 1496 aa21.96■■□□□ 1.11
CCNL1-213ENST00000471044 CHMP7Q8WUX9 453 aaPredicted RBP21.95■■□□□ 1.1
CCNL1-213ENST00000471044 CLASP1Q7Z460 1538 aa21.93■■□□□ 1.1
CCNL1-213ENST00000471044 ADAMTS12P58397 1594 aa21.84■■□□□ 1.09
CCNL1-213ENST00000471044 ERICH3Q5RHP9 1530 aa21.83■■□□□ 1.09
CCNL1-213ENST00000471044 GRIN2AQ12879 1464 aa21.79■■□□□ 1.08
CCNL1-213ENST00000471044 FHAD1B1AJZ9 1412 aa21.77■■□□□ 1.08
CCNL1-213ENST00000471044 SLC4A1APQ9BWU0 796 aaKnown RBP21.76■■□□□ 1.07
CCNL1-213ENST00000471044 SPINK5Q9NQ38 1064 aaPredicted RBP21.74■■□□□ 1.07
CCNL1-213ENST00000471044 CEP170Q5SW79 1584 aa21.72■■□□□ 1.07
CCNL1-213ENST00000471044 NUP160Q12769 1436 aa21.72■■□□□ 1.07
CCNL1-213ENST00000471044 CAPN15O75808 1086 aa21.67■■□□□ 1.06
CCNL1-213ENST00000471044 SHROOM2Q13796 1616 aa21.63■■□□□ 1.05
CCNL1-213ENST00000471044 KIF27Q86VH2 1401 aa21.62■■□□□ 1.05
CCNL1-213ENST00000471044 CUL7Q14999 1698 aa21.6■■□□□ 1.05
CCNL1-213ENST00000471044 ERCC6L2Q5T890 1561 aa21.58■■□□□ 1.05
CCNL1-213ENST00000471044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.58■■□□□ 1.05
CCNL1-213ENST00000471044 HNRNPUL2Q1KMD3 747 aaKnown RBP21.58■■□□□ 1.05
CCNL1-213ENST00000471044 IGF1RP08069 1367 aa21.57■■□□□ 1.04
CCNL1-213ENST00000471044 RUSC2Q8N2Y8 1516 aa21.53■■□□□ 1.04
CCNL1-213ENST00000471044 APLP2Q06481 763 aa21.51■■□□□ 1.03
CCNL1-213ENST00000471044 DSG3P32926 999 aa21.5■■□□□ 1.03
CCNL1-213ENST00000471044 SAMD1Q6SPF0 538 aaPredicted RBP21.48■■□□□ 1.03
CCNL1-213ENST00000471044 JPH4Q96JJ6 628 aa21.46■■□□□ 1.03
CCNL1-213ENST00000471044 PRG4Q92954 1404 aaPredicted RBP21.46■■□□□ 1.03
CCNL1-213ENST00000471044 MYCNP04198 464 aaPredicted RBP21.44■■□□□ 1.02
CCNL1-213ENST00000471044 CARMIL1Q5VZK9 1371 aa21.44■■□□□ 1.02
CCNL1-213ENST00000471044 KIAA0586Q9BVV6 1533 aa21.43■■□□□ 1.02
CCNL1-213ENST00000471044 FOXD4L1Q9NU39 408 aa21.36■■□□□ 1.01
CCNL1-213ENST00000471044 ZNF219Q9P2Y4 722 aaPredicted RBP21.35■■□□□ 1.01
CCNL1-213ENST00000471044 KIF13AQ9H1H9 1805 aa21.32■■□□□ 1
CCNL1-213ENST00000471044 RAPGEF2Q9Y4G8 1499 aa21.29■■□□□ 1
CCNL1-213ENST00000471044 IQGAP2Q13576 1575 aa21.28■■□□□ 1
CCNL1-213ENST00000471044 ADCY10Q96PN6 1610 aa21.22■□□□□ 0.99
CCNL1-213ENST00000471044 ABCB7O75027 752 aa21.2■□□□□ 0.98
CCNL1-213ENST00000471044 CARMIL2Q6F5E8 1435 aa21.2■□□□□ 0.98
CCNL1-213ENST00000471044 CTTNBP2Q8WZ74 1663 aa21.19■□□□□ 0.98
CCNL1-213ENST00000471044 ZBTB22O15209 634 aa21.17■□□□□ 0.98
CCNL1-213ENST00000471044 UGGT2Q9NYU1 1516 aa21.15■□□□□ 0.98
CCNL1-213ENST00000471044 PTPRGP23470 1445 aa21.15■□□□□ 0.98
CCNL1-213ENST00000471044 TNIKQ9UKE5 1360 aa21.15■□□□□ 0.98
CCNL1-213ENST00000471044 MAPKBP1O60336 1514 aa21.14■□□□□ 0.98
CCNL1-213ENST00000471044 DISP1Q96F81 1524 aa21.14■□□□□ 0.97
CCNL1-213ENST00000471044 PRXQ9BXM0 1461 aa21.13■□□□□ 0.97
CCNL1-213ENST00000471044 NPM1P06748 294 aaKnown RBP eCLIP21.13■□□□□ 0.97
CCNL1-213ENST00000471044 FAM69CQ0P6D2 419 aa21.11■□□□□ 0.97
CCNL1-213ENST00000471044 ABCC10Q5T3U5 1492 aa21.1■□□□□ 0.97
CCNL1-213ENST00000471044 KIAA0556O60303 1618 aa21.09■□□□□ 0.97
CCNL1-213ENST00000471044 DIP2BQ9P265 1576 aa21.06■□□□□ 0.96
CCNL1-213ENST00000471044 TTBK1Q5TCY1 1321 aaPredicted RBP21.04■□□□□ 0.96
CCNL1-213ENST00000471044 UHRF1BP1LA0JNW5 1464 aa21.04■□□□□ 0.96
CCNL1-213ENST00000471044 ABCC2Q92887 1545 aa21.03■□□□□ 0.96
CCNL1-213ENST00000471044 EEA1Q15075 1411 aa21.02■□□□□ 0.96
CCNL1-213ENST00000471044 UACAQ9BZF9 1416 aa21.02■□□□□ 0.96
CCNL1-213ENST00000471044 KDM6BO15054 1643 aa21.01■□□□□ 0.95
CCNL1-213ENST00000471044 CSRNP3Q8WYN3 585 aa21.01■□□□□ 0.95
CCNL1-213ENST00000471044 TSPOAP1O95153 1857 aa21.01■□□□□ 0.95
CCNL1-213ENST00000471044 GOLGA3Q08378 1498 aa21■□□□□ 0.95
CCNL1-213ENST00000471044 KDM4FA0A1W2PPD8 638 aa20.99■□□□□ 0.95
CCNL1-213ENST00000471044 ATF5Q9Y2D1 282 aaPredicted RBP20.96■□□□□ 0.95
CCNL1-213ENST00000471044 KDM5BQ9UGL1 1544 aa20.94■□□□□ 0.94
CCNL1-213ENST00000471044 ZCCHC11Q5TAX3 1644 aaKnown RBP20.93■□□□□ 0.94
CCNL1-213ENST00000471044 PLB1Q6P1J6 1458 aa20.92■□□□□ 0.94
CCNL1-213ENST00000471044 ASXL2Q76L83 1435 aa20.91■□□□□ 0.94
CCNL1-213ENST00000471044 POLA2Q14181 598 aa20.9■□□□□ 0.94
CCNL1-213ENST00000471044 GLI2P10070 1586 aa20.89■□□□□ 0.93
CCNL1-213ENST00000471044 ABCA8O94911 1581 aa20.88■□□□□ 0.93
CCNL1-213ENST00000471044 ILDR1Q86SU0 546 aaPredicted RBP20.86■□□□□ 0.93
CCNL1-213ENST00000471044 KIF21BO75037 1637 aa20.86■□□□□ 0.93
CCNL1-213ENST00000471044 SAMD9Q5K651 1589 aa20.85■□□□□ 0.93
CCNL1-213ENST00000471044 FAM9AQ8IZU1 332 aaPredicted RBP20.82■□□□□ 0.92
CCNL1-213ENST00000471044 PPRC1Q5VV67 1664 aaKnown RBP20.82■□□□□ 0.92
CCNL1-213ENST00000471044 EPRSP07814 1512 aaKnown RBP20.81■□□□□ 0.92
CCNL1-213ENST00000471044 MAP3K4Q9Y6R4 1608 aa20.78■□□□□ 0.92
CCNL1-213ENST00000471044 P3H3Q8IVL6 736 aa20.77■□□□□ 0.92
CCNL1-213ENST00000471044 WDR7Q9Y4E6 1490 aa20.76■□□□□ 0.91
CCNL1-213ENST00000471044 ADGRL1O94910 1474 aa20.73■□□□□ 0.91
CCNL1-213ENST00000471044 RAPGEF6Q8TEU7 1601 aa20.72■□□□□ 0.91
CCNL1-213ENST00000471044 CFAP43Q8NDM7 1665 aa20.7■□□□□ 0.9
CCNL1-213ENST00000471044 ATXN8OSP0DMR3 200 aa20.69■□□□□ 0.9
CCNL1-213ENST00000471044 ATP10BO94823 1461 aa20.68■□□□□ 0.9
CCNL1-213ENST00000471044 EFCAB5A4FU69 1503 aa20.68■□□□□ 0.9
CCNL1-213ENST00000471044 TEX14Q8IWB6 1497 aa20.67■□□□□ 0.9
CCNL1-213ENST00000471044 FHOD3Q2V2M9 1422 aa20.65■□□□□ 0.9
CCNL1-213ENST00000471044 RANGAP1P46060 587 aaPredicted RBP20.65■□□□□ 0.9
CCNL1-213ENST00000471044 COL17A1Q9UMD9 1497 aaPredicted RBP20.62■□□□□ 0.89
CCNL1-213ENST00000471044 HECW2Q9P2P5 1572 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms