RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 KIF27Q86VH2 1401 aa20.1■□□□□ 0.81
HLA-C-206ENST00000470363 RUSC2Q8N2Y8 1516 aa20.07■□□□□ 0.8
HLA-C-206ENST00000470363 KIAA0586Q9BVV6 1533 aa20.04■□□□□ 0.8
HLA-C-206ENST00000470363 CARMIL1Q5VZK9 1371 aa20■□□□□ 0.79
HLA-C-206ENST00000470363 CUL7Q14999 1698 aa19.99■□□□□ 0.79
HLA-C-206ENST00000470363 ADCY10Q96PN6 1610 aa19.88■□□□□ 0.77
HLA-C-206ENST00000470363 ABCC10Q5T3U5 1492 aa19.87■□□□□ 0.77
HLA-C-206ENST00000470363 MAPKBP1O60336 1514 aa19.86■□□□□ 0.77
HLA-C-206ENST00000470363 KIF13AQ9H1H9 1805 aa19.86■□□□□ 0.77
HLA-C-206ENST00000470363 NPM1P06748 294 aaKnown RBP eCLIP19.85■□□□□ 0.77
HLA-C-206ENST00000470363 FAM69CQ0P6D2 419 aa19.84■□□□□ 0.77
HLA-C-206ENST00000470363 PTPRGP23470 1445 aa19.84■□□□□ 0.77
HLA-C-206ENST00000470363 TNIKQ9UKE5 1360 aa19.81■□□□□ 0.76
HLA-C-206ENST00000470363 RAPGEF2Q9Y4G8 1499 aa19.79■□□□□ 0.76
HLA-C-206ENST00000470363 CARMIL2Q6F5E8 1435 aa19.78■□□□□ 0.76
HLA-C-206ENST00000470363 IQGAP2Q13576 1575 aa19.78■□□□□ 0.76
HLA-C-206ENST00000470363 DISP1Q96F81 1524 aa19.77■□□□□ 0.76
HLA-C-206ENST00000470363 DIP2BQ9P265 1576 aa19.77■□□□□ 0.76
HLA-C-206ENST00000470363 ABCC2Q92887 1545 aa19.73■□□□□ 0.75
HLA-C-206ENST00000470363 UGGT2Q9NYU1 1516 aa19.72■□□□□ 0.75
HLA-C-206ENST00000470363 UHRF1BP1LA0JNW5 1464 aa19.72■□□□□ 0.75
HLA-C-206ENST00000470363 TTBK1Q5TCY1 1321 aaPredicted RBP19.71■□□□□ 0.75
HLA-C-206ENST00000470363 UACAQ9BZF9 1416 aa19.69■□□□□ 0.74
HLA-C-206ENST00000470363 PRXQ9BXM0 1461 aa19.66■□□□□ 0.74
HLA-C-206ENST00000470363 ASXL2Q76L83 1435 aa19.65■□□□□ 0.74
HLA-C-206ENST00000470363 KDM5BQ9UGL1 1544 aa19.63■□□□□ 0.73
HLA-C-206ENST00000470363 PLB1Q6P1J6 1458 aa19.63■□□□□ 0.73
HLA-C-206ENST00000470363 KIAA0556O60303 1618 aa19.61■□□□□ 0.73
HLA-C-206ENST00000470363 GLI2P10070 1586 aa19.6■□□□□ 0.73
HLA-C-206ENST00000470363 EPRSP07814 1512 aaKnown RBP19.54■□□□□ 0.72
HLA-C-206ENST00000470363 KDM6BO15054 1643 aa19.53■□□□□ 0.72
HLA-C-206ENST00000470363 TSPOAP1O95153 1857 aa19.52■□□□□ 0.72
HLA-C-206ENST00000470363 PPRC1Q5VV67 1664 aaKnown RBP19.52■□□□□ 0.71
HLA-C-206ENST00000470363 GOLGA3Q08378 1498 aa19.51■□□□□ 0.71
HLA-C-206ENST00000470363 CTTNBP2Q8WZ74 1663 aa19.5■□□□□ 0.71
HLA-C-206ENST00000470363 CSRNP3Q8WYN3 585 aa19.5■□□□□ 0.71
HLA-C-206ENST00000470363 ZCCHC11Q5TAX3 1644 aaKnown RBP19.5■□□□□ 0.71
HLA-C-206ENST00000470363 KDM4FA0A1W2PPD8 638 aa19.49■□□□□ 0.71
HLA-C-206ENST00000470363 COL17A1Q9UMD9 1497 aaPredicted RBP19.48■□□□□ 0.71
HLA-C-206ENST00000470363 ABCA8O94911 1581 aa19.48■□□□□ 0.71
HLA-C-206ENST00000470363 MAP3K4Q9Y6R4 1608 aa19.45■□□□□ 0.7
HLA-C-206ENST00000470363 WDR7Q9Y4E6 1490 aa19.45■□□□□ 0.7
HLA-C-206ENST00000470363 P3H3Q8IVL6 736 aa19.38■□□□□ 0.69
HLA-C-206ENST00000470363 TEX14Q8IWB6 1497 aa19.38■□□□□ 0.69
HLA-C-206ENST00000470363 EEA1Q15075 1411 aa19.36■□□□□ 0.69
HLA-C-206ENST00000470363 ATP10BO94823 1461 aa19.35■□□□□ 0.69
HLA-C-206ENST00000470363 KCNH8Q96L42 1107 aa19.35■□□□□ 0.69
HLA-C-206ENST00000470363 MAGI3Q5TCQ9 1506 aa19.35■□□□□ 0.69
HLA-C-206ENST00000470363 CD109Q6YHK3 1445 aa19.34■□□□□ 0.69
HLA-C-206ENST00000470363 SAMD9Q5K651 1589 aa19.34■□□□□ 0.69
HLA-C-206ENST00000470363 ARID3CA6NKF2 412 aa19.27■□□□□ 0.68
HLA-C-206ENST00000470363 CHIC1Q5VXU3 224 aa19.27■□□□□ 0.68
HLA-C-206ENST00000470363 CFAP43Q8NDM7 1665 aa19.27■□□□□ 0.67
HLA-C-206ENST00000470363 FAM9AQ8IZU1 332 aaPredicted RBP19.26■□□□□ 0.67
HLA-C-206ENST00000470363 ADGRL1O94910 1474 aa19.23■□□□□ 0.67
HLA-C-206ENST00000470363 NUP153P49790 1475 aaKnown RBP19.22■□□□□ 0.67
HLA-C-206ENST00000470363 RAPGEF6Q8TEU7 1601 aa19.22■□□□□ 0.67
HLA-C-206ENST00000470363 ARAP3Q8WWN8 1544 aa19.2■□□□□ 0.66
HLA-C-206ENST00000470363 FHOD3Q2V2M9 1422 aa19.2■□□□□ 0.66
HLA-C-206ENST00000470363 KIF21BO75037 1637 aa19.18■□□□□ 0.66
HLA-C-206ENST00000470363 ABCA9Q8IUA7 1624 aa19.18■□□□□ 0.66
HLA-C-206ENST00000470363 RANGAP1P46060 587 aaPredicted RBP19.18■□□□□ 0.66
HLA-C-206ENST00000470363 PHLDB1Q86UU1 1377 aa19.17■□□□□ 0.66
HLA-C-206ENST00000470363 EFCAB5A4FU69 1503 aa19.12■□□□□ 0.65
HLA-C-206ENST00000470363 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.11■□□□□ 0.65
HLA-C-206ENST00000470363 HNRNPUL2Q1KMD3 747 aaKnown RBP19.11■□□□□ 0.65
HLA-C-206ENST00000470363 NEO1Q92859 1461 aa19.1■□□□□ 0.65
HLA-C-206ENST00000470363 PLEKHD1A6NEE1 506 aa19.1■□□□□ 0.65
HLA-C-206ENST00000470363 RAPGEF3O95398 923 aa19.09■□□□□ 0.65
HLA-C-206ENST00000470363 UBTFP17480 764 aaKnown RBP19.04■□□□□ 0.64
HLA-C-206ENST00000470363 ARHGAP35Q9NRY4 1499 aa19.03■□□□□ 0.64
HLA-C-206ENST00000470363 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.01■□□□□ 0.63
HLA-C-206ENST00000470363 FRMPD1Q5SYB0 1578 aa19.01■□□□□ 0.63
HLA-C-206ENST00000470363 EHMT2Q96KQ7 1210 aa19■□□□□ 0.63
HLA-C-206ENST00000470363 CDK13Q14004 1512 aaKnown RBP18.99■□□□□ 0.63
HLA-C-206ENST00000470363 AKNAQ7Z591 1439 aa18.99■□□□□ 0.63
HLA-C-206ENST00000470363 FMN1Q68DA7 1419 aa18.98■□□□□ 0.63
HLA-C-206ENST00000470363 FANCAO15360 1455 aa18.97■□□□□ 0.63
HLA-C-206ENST00000470363 DENND4BO75064 1496 aaPredicted RBP18.95■□□□□ 0.62
HLA-C-206ENST00000470363 TTC37Q6PGP7 1564 aa18.94■□□□□ 0.62
HLA-C-206ENST00000470363 PLCH2O75038 1416 aa18.93■□□□□ 0.62
HLA-C-206ENST00000470363 HECW2Q9P2P5 1572 aa18.93■□□□□ 0.62
HLA-C-206ENST00000470363 ADAMTSL3P82987 1691 aa18.92■□□□□ 0.62
HLA-C-206ENST00000470363 RICTORQ6R327 1708 aa18.9■□□□□ 0.62
HLA-C-206ENST00000470363 PTPRMP28827 1452 aa18.89■□□□□ 0.61
HLA-C-206ENST00000470363 ATP1B4Q9UN42 357 aaPredicted RBP18.88■□□□□ 0.61
HLA-C-206ENST00000470363 ZMYM4Q5VZL5 1548 aa18.87■□□□□ 0.61
HLA-C-206ENST00000470363 HECW1Q76N89 1606 aa18.87■□□□□ 0.61
HLA-C-206ENST00000470363 CDK11AQ9UQ88 783 aaPredicted RBP18.87■□□□□ 0.61
HLA-C-206ENST00000470363 CFAP74Q9C0B2 1584 aa18.86■□□□□ 0.61
HLA-C-206ENST00000470363 ARHGEF40Q8TER5 1519 aa18.85■□□□□ 0.61
HLA-C-206ENST00000470363 SCAPERQ9BY12 1400 aa18.85■□□□□ 0.61
HLA-C-206ENST00000470363 YEATS2Q9ULM3 1422 aa18.85■□□□□ 0.61
HLA-C-206ENST00000470363 BCORL1Q5H9F3 1711 aa18.85■□□□□ 0.61
HLA-C-206ENST00000470363 MAGI2Q86UL8 1455 aa18.84■□□□□ 0.61
HLA-C-206ENST00000470363 TROQ12816 1431 aaPredicted RBP18.84■□□□□ 0.61
HLA-C-206ENST00000470363 ARID4BQ4LE39 1312 aaPredicted RBP18.83■□□□□ 0.61
HLA-C-206ENST00000470363 EFCAB2Q5VUJ9 269 aa18.83■□□□□ 0.6
HLA-C-206ENST00000470363 POGZQ7Z3K3 1410 aa18.83■□□□□ 0.6
HLA-C-206ENST00000470363 CASKIN1Q8WXD9 1431 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms