RNA–Protein interactions for RNA: ENST00000469741.6

C19orf54-202, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 1,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-202ENST00000469741 CYB5RLQ6IPT4 315 aa25.44■■□□□ 1.66
C19orf54-202ENST00000469741 ARAP1Q96P48 1450 aa25.41■■□□□ 1.66
C19orf54-202ENST00000469741 CSRNP3Q8WYN3 585 aa25.41■■□□□ 1.66
C19orf54-202ENST00000469741 RAPGEF2Q9Y4G8 1499 aa25.4■■□□□ 1.66
C19orf54-202ENST00000469741 JPH4Q96JJ6 628 aa25.4■■□□□ 1.66
C19orf54-202ENST00000469741 PRXQ9BXM0 1461 aa25.39■■□□□ 1.65
C19orf54-202ENST00000469741 EHMT2Q96KQ7 1210 aa25.37■■□□□ 1.65
C19orf54-202ENST00000469741 SHROOM2Q13796 1616 aa25.36■■□□□ 1.65
C19orf54-202ENST00000469741 KIAA0586Q9BVV6 1533 aa25.33■■□□□ 1.64
C19orf54-202ENST00000469741 PRG4Q92954 1404 aaPredicted RBP25.32■■□□□ 1.64
C19orf54-202ENST00000469741 EEA1Q15075 1411 aa25.32■■□□□ 1.64
C19orf54-202ENST00000469741 IQGAP2Q13576 1575 aa25.2■■□□□ 1.62
C19orf54-202ENST00000469741 TTBK1Q5TCY1 1321 aaPredicted RBP25.19■■□□□ 1.62
C19orf54-202ENST00000469741 CTTNBP2Q8WZ74 1663 aa25.15■■□□□ 1.62
C19orf54-202ENST00000469741 DISP1Q96F81 1524 aa25.13■■□□□ 1.61
C19orf54-202ENST00000469741 RANGAP1P46060 587 aaPredicted RBP25.13■■□□□ 1.61
C19orf54-202ENST00000469741 PCGF6Q9BYE7 350 aa25.11■■□□□ 1.61
C19orf54-202ENST00000469741 KIF21BO75037 1637 aa25.08■■□□□ 1.61
C19orf54-202ENST00000469741 UGGT2Q9NYU1 1516 aa25.07■■□□□ 1.6
C19orf54-202ENST00000469741 P3H3Q8IVL6 736 aa25.05■■□□□ 1.6
C19orf54-202ENST00000469741 TRIM26Q12899 539 aaPredicted RBP25.03■■□□□ 1.6
C19orf54-202ENST00000469741 TNIKQ9UKE5 1360 aa25■■□□□ 1.59
C19orf54-202ENST00000469741 KIAA0556O60303 1618 aa25■■□□□ 1.59
C19orf54-202ENST00000469741 UBTFP17480 764 aaKnown RBP24.99■■□□□ 1.59
C19orf54-202ENST00000469741 PTPRGP23470 1445 aa24.99■■□□□ 1.59
C19orf54-202ENST00000469741 CARMIL2Q6F5E8 1435 aa24.98■■□□□ 1.59
C19orf54-202ENST00000469741 GOLGA3Q08378 1498 aa24.96■■□□□ 1.59
C19orf54-202ENST00000469741 ADCY10Q96PN6 1610 aa24.94■■□□□ 1.58
C19orf54-202ENST00000469741 CEP162Q5TB80 1403 aa24.88■■□□□ 1.57
C19orf54-202ENST00000469741 PLB1Q6P1J6 1458 aa24.86■■□□□ 1.57
C19orf54-202ENST00000469741 SAMD9Q5K651 1589 aa24.85■■□□□ 1.57
C19orf54-202ENST00000469741 HRCP23327 699 aa24.85■■□□□ 1.57
C19orf54-202ENST00000469741 FHOD3Q2V2M9 1422 aa24.83■■□□□ 1.57
C19orf54-202ENST00000469741 TRHP20396 242 aaPredicted RBP24.82■■□□□ 1.56
C19orf54-202ENST00000469741 UACAQ9BZF9 1416 aa24.81■■□□□ 1.56
C19orf54-202ENST00000469741 ARID3CA6NKF2 412 aa24.8■■□□□ 1.56
C19orf54-202ENST00000469741 ARHGAP35Q9NRY4 1499 aa24.75■■□□□ 1.55
C19orf54-202ENST00000469741 ABCC2Q92887 1545 aa24.74■■□□□ 1.55
C19orf54-202ENST00000469741 ABCA8O94911 1581 aa24.73■■□□□ 1.55
C19orf54-202ENST00000469741 UHRF1BP1LA0JNW5 1464 aa24.71■■□□□ 1.55
C19orf54-202ENST00000469741 NPM1P06748 294 aaKnown RBP eCLIP24.7■■□□□ 1.54
C19orf54-202ENST00000469741 KDM5BQ9UGL1 1544 aa24.65■■□□□ 1.54
C19orf54-202ENST00000469741 ZCCHC11Q5TAX3 1644 aaKnown RBP24.65■■□□□ 1.54
C19orf54-202ENST00000469741 EFCAB5A4FU69 1503 aa24.64■■□□□ 1.54
C19orf54-202ENST00000469741 KIF13AQ9H1H9 1805 aa24.64■■□□□ 1.53
C19orf54-202ENST00000469741 MAPKBP1O60336 1514 aa24.62■■□□□ 1.53
C19orf54-202ENST00000469741 ASXL2Q76L83 1435 aa24.62■■□□□ 1.53
C19orf54-202ENST00000469741 RAPGEF6Q8TEU7 1601 aa24.6■■□□□ 1.53
C19orf54-202ENST00000469741 FAM69CQ0P6D2 419 aa24.59■■□□□ 1.53
C19orf54-202ENST00000469741 ATP10BO94823 1461 aa24.59■■□□□ 1.53
C19orf54-202ENST00000469741 NUP153P49790 1475 aaKnown RBP24.58■■□□□ 1.53
C19orf54-202ENST00000469741 CLIP1P30622 1438 aa24.58■■□□□ 1.52
C19orf54-202ENST00000469741 ABCC10Q5T3U5 1492 aa24.56■■□□□ 1.52
C19orf54-202ENST00000469741 DIP2BQ9P265 1576 aa24.54■■□□□ 1.52
C19orf54-202ENST00000469741 ATP1B4Q9UN42 357 aaPredicted RBP24.53■■□□□ 1.52
C19orf54-202ENST00000469741 KCNH8Q96L42 1107 aa24.51■■□□□ 1.51
C19orf54-202ENST00000469741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.48■■□□□ 1.51
C19orf54-202ENST00000469741 HNRNPUL2Q1KMD3 747 aaKnown RBP24.48■■□□□ 1.51
C19orf54-202ENST00000469741 CDK13Q14004 1512 aaKnown RBP24.48■■□□□ 1.51
C19orf54-202ENST00000469741 PPARGC1BQ86YN6 1023 aaKnown RBP24.47■■□□□ 1.51
C19orf54-202ENST00000469741 TSPOAP1O95153 1857 aa24.47■■□□□ 1.51
C19orf54-202ENST00000469741 LRRIQ1Q96JM4 1722 aa24.47■■□□□ 1.51
C19orf54-202ENST00000469741 EPRSP07814 1512 aaKnown RBP24.46■■□□□ 1.51
C19orf54-202ENST00000469741 WDR7Q9Y4E6 1490 aa24.45■■□□□ 1.5
C19orf54-202ENST00000469741 VPS8Q8N3P4 1428 aa24.44■■□□□ 1.5
C19orf54-202ENST00000469741 FMN1Q68DA7 1419 aa24.44■■□□□ 1.5
C19orf54-202ENST00000469741 PCF11O94913 1555 aaKnown RBP24.41■■□□□ 1.5
C19orf54-202ENST00000469741 PPRC1Q5VV67 1664 aaKnown RBP24.36■■□□□ 1.49
C19orf54-202ENST00000469741 GLI2P10070 1586 aa24.34■■□□□ 1.49
C19orf54-202ENST00000469741 CASKIN1Q8WXD9 1431 aa24.33■■□□□ 1.49
C19orf54-202ENST00000469741 HECW1Q76N89 1606 aa24.32■■□□□ 1.48
C19orf54-202ENST00000469741 ZEB1P37275 1124 aaPredicted RBP24.31■■□□□ 1.48
C19orf54-202ENST00000469741 MAP3K4Q9Y6R4 1608 aa24.31■■□□□ 1.48
C19orf54-202ENST00000469741 PLEKHD1A6NEE1 506 aa24.29■■□□□ 1.48
C19orf54-202ENST00000469741 MAGI3Q5TCQ9 1506 aa24.27■■□□□ 1.48
C19orf54-202ENST00000469741 CD109Q6YHK3 1445 aa24.25■■□□□ 1.47
C19orf54-202ENST00000469741 FYCO1Q9BQS8 1478 aa24.23■■□□□ 1.47
C19orf54-202ENST00000469741 COL17A1Q9UMD9 1497 aaPredicted RBP24.23■■□□□ 1.47
C19orf54-202ENST00000469741 KIF14Q15058 1648 aa24.21■■□□□ 1.47
C19orf54-202ENST00000469741 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.2■■□□□ 1.46
C19orf54-202ENST00000469741 APLP2Q06481 763 aa24.2■■□□□ 1.46
C19orf54-202ENST00000469741 ABCA9Q8IUA7 1624 aa24.2■■□□□ 1.46
C19orf54-202ENST00000469741 TTC37Q6PGP7 1564 aa24.19■■□□□ 1.46
C19orf54-202ENST00000469741 CFAP43Q8NDM7 1665 aa24.18■■□□□ 1.46
C19orf54-202ENST00000469741 TROQ12816 1431 aaPredicted RBP24.14■■□□□ 1.45
C19orf54-202ENST00000469741 CCDC18Q5T9S5 1454 aa24.12■■□□□ 1.45
C19orf54-202ENST00000469741 KDM6BO15054 1643 aa24.09■■□□□ 1.45
C19orf54-202ENST00000469741 CDK11AQ9UQ88 783 aaPredicted RBP24.09■■□□□ 1.45
C19orf54-202ENST00000469741 KANK4Q5T7N3 995 aaPredicted RBP24.06■■□□□ 1.44
C19orf54-202ENST00000469741 TEX14Q8IWB6 1497 aa24.04■■□□□ 1.44
C19orf54-202ENST00000469741 RAPGEF3O95398 923 aa24.02■■□□□ 1.44
C19orf54-202ENST00000469741 PLCH2O75038 1416 aa24■■□□□ 1.43
C19orf54-202ENST00000469741 TIAM1Q13009 1591 aa23.99■■□□□ 1.43
C19orf54-202ENST00000469741 MTUS2Q5JR59 1369 aa23.99■■□□□ 1.43
C19orf54-202ENST00000469741 FANCAO15360 1455 aa23.98■■□□□ 1.43
C19orf54-202ENST00000469741 CDC42BPBQ9Y5S2 1711 aa23.98■■□□□ 1.43
C19orf54-202ENST00000469741 MAP3K1Q13233 1512 aa23.96■■□□□ 1.43
C19orf54-202ENST00000469741 MYO5CQ9NQX4 1742 aa23.96■■□□□ 1.43
C19orf54-202ENST00000469741 AKNAQ7Z591 1439 aa23.95■■□□□ 1.43
C19orf54-202ENST00000469741 CDC42BPAQ5VT25 1732 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms