RNA–Protein interactions for RNA: ENST00000469641.5

ATP13A1-205, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 4,241 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-205ENST00000469641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.68□□□□□ -0.061e-6■■■■□ 20.8
ATP13A1-205ENST00000469641 DDX10Q13206 875 aaKnown RBP14.68□□□□□ -0.06
ATP13A1-205ENST00000469641 PLPPR3Q6T4P5 718 aa14.67□□□□□ -0.06
ATP13A1-205ENST00000469641 ANP32EQ9BTT0 268 aa14.66□□□□□ -0.06
ATP13A1-205ENST00000469641 RAPGEF2Q9Y4G8 1499 aa14.62□□□□□ -0.07
ATP13A1-205ENST00000469641 NPM1P06748 294 aaKnown RBP eCLIP14.6□□□□□ -0.07
ATP13A1-205ENST00000469641 EIF4G1Q04637 1599 aaKnown RBP14.6□□□□□ -0.07
ATP13A1-205ENST00000469641 VPS8Q8N3P4 1428 aa14.59□□□□□ -0.07
ATP13A1-205ENST00000469641 PDS5BQ9NTI5 1447 aa14.57□□□□□ -0.08
ATP13A1-205ENST00000469641 BCL11AQ9H165 835 aa14.57□□□□□ -0.08
ATP13A1-205ENST00000469641 NESP48681 1621 aa14.56□□□□□ -0.08
ATP13A1-205ENST00000469641 SIN3AQ96ST3 1273 aa14.56□□□□□ -0.08
ATP13A1-205ENST00000469641 KDM2AQ9Y2K7 1162 aa14.55□□□□□ -0.08
ATP13A1-205ENST00000469641 PLEKHD1A6NEE1 506 aa14.55□□□□□ -0.08
ATP13A1-205ENST00000469641 CHGAP10645 457 aaKnown RBP14.55□□□□□ -0.08
ATP13A1-205ENST00000469641 FANCD2Q9BXW9 1451 aa14.54□□□□□ -0.08
ATP13A1-205ENST00000469641 BICRAQ9NZM4 1560 aa14.54□□□□□ -0.08
ATP13A1-205ENST00000469641 EIF5BO60841 1220 aaKnown RBP14.54□□□□□ -0.08
ATP13A1-205ENST00000469641 NBR1Q14596 966 aa14.54□□□□□ -0.08
ATP13A1-205ENST00000469641 RAD54L2Q9Y4B4 1467 aa14.53□□□□□ -0.08
ATP13A1-205ENST00000469641 TSPY4P0CV99 314 aa14.52□□□□□ -0.08
ATP13A1-205ENST00000469641 TSPY10P0CW01 314 aa14.52□□□□□ -0.08
ATP13A1-205ENST00000469641 HNRNPUQ00839 825 aaKnown RBP eCLIP14.52□□□□□ -0.09
ATP13A1-205ENST00000469641 CFDP1Q9UEE9 299 aaPredicted RBP14.51□□□□□ -0.09
ATP13A1-205ENST00000469641 NCAPD3P42695 1498 aa14.5□□□□□ -0.09
ATP13A1-205ENST00000469641 ANP32AP39687 249 aaKnown RBP14.5□□□□□ -0.09
ATP13A1-205ENST00000469641 SUPT16HQ9Y5B9 1047 aaKnown RBP14.5□□□□□ -0.09
ATP13A1-205ENST00000469641 TONSLQ96HA7 1378 aa14.49□□□□□ -0.09
ATP13A1-205ENST00000469641 IRX6P78412 446 aaPredicted RBP14.49□□□□□ -0.09
ATP13A1-205ENST00000469641 NPM2Q86SE8 214 aaKnown RBP14.49□□□□□ -0.09
ATP13A1-205ENST00000469641 FHOD3Q2V2M9 1422 aa14.48□□□□□ -0.09
ATP13A1-205ENST00000469641 SENP3-EIF4A1A0A087X0R7 540 aa14.46□□□□□ -0.09
ATP13A1-205ENST00000469641 RGL3Q3MIN7 710 aa14.46□□□□□ -0.09
ATP13A1-205ENST00000469641 FOXD1Q16676 465 aa14.44□□□□□ -0.1
ATP13A1-205ENST00000469641 IGF1RP08069 1367 aa14.44□□□□□ -0.1
ATP13A1-205ENST00000469641 FGD5Q6ZNL6 1462 aa14.43□□□□□ -0.1
ATP13A1-205ENST00000469641 TRHP20396 242 aaPredicted RBP14.42□□□□□ -0.1
ATP13A1-205ENST00000469641 FAM9BQ8IZU0 186 aa14.41□□□□□ -0.1
ATP13A1-205ENST00000469641 CCNB3Q8WWL7 1395 aa14.41□□□□□ -0.1
ATP13A1-205ENST00000469641 CC2D2AQ9P2K1 1620 aa14.39□□□□□ -0.11
ATP13A1-205ENST00000469641 AQRO60306 1485 aaKnown RBP eCLIP14.39□□□□□ -0.114e-8■■■■□ 25.4
ATP13A1-205ENST00000469641 JPH4Q96JJ6 628 aa14.38□□□□□ -0.11
ATP13A1-205ENST00000469641 DHX57Q6P158 1386 aaKnown RBP14.37□□□□□ -0.11
ATP13A1-205ENST00000469641 SYNJ1O43426 1573 aa14.37□□□□□ -0.11
ATP13A1-205ENST00000469641 SALL2Q9Y467 1007 aaPredicted RBP14.35□□□□□ -0.11
ATP13A1-205ENST00000469641 ESF1Q9H501 851 aaKnown RBP14.33□□□□□ -0.12
ATP13A1-205ENST00000469641 FHAD1B1AJZ9 1412 aa14.33□□□□□ -0.12
ATP13A1-205ENST00000469641 CFTRP13569 1480 aa14.32□□□□□ -0.12
ATP13A1-205ENST00000469641 ZBTB47Q9UFB7 747 aaPredicted RBP14.32□□□□□ -0.12
ATP13A1-205ENST00000469641 UNC13AQ9UPW8 1703 aa14.3□□□□□ -0.12
ATP13A1-205ENST00000469641 STAG3Q9UJ98 1225 aa14.3□□□□□ -0.12
ATP13A1-205ENST00000469641 PRKCSHP14314 528 aaPredicted RBP14.3□□□□□ -0.12
ATP13A1-205ENST00000469641 TSHZ2Q9NRE2 1034 aa14.3□□□□□ -0.12
ATP13A1-205ENST00000469641 CCDC136Q96JN2 1154 aa14.27□□□□□ -0.12
ATP13A1-205ENST00000469641 RAB3GAP2Q9H2M9 1393 aa14.27□□□□□ -0.13
ATP13A1-205ENST00000469641 GAPVD1Q14C86 1478 aa14.26□□□□□ -0.13
ATP13A1-205ENST00000469641 MRS2Q9HD23 443 aa14.26□□□□□ -0.13
ATP13A1-205ENST00000469641 RBM19Q9Y4C8 960 aaKnown RBP14.26□□□□□ -0.13
ATP13A1-205ENST00000469641 HNRNPMP52272 730 aaKnown RBP eCLIP14.25□□□□□ -0.13
ATP13A1-205ENST00000469641 KIF21BO75037 1637 aa14.25□□□□□ -0.13
ATP13A1-205ENST00000469641 CUX1P39880 1505 aa14.25□□□□□ -0.13
ATP13A1-205ENST00000469641 SETD5Q9C0A6 1442 aa14.24□□□□□ -0.13
ATP13A1-205ENST00000469641 CYB5RLQ6IPT4 315 aa14.24□□□□□ -0.13
ATP13A1-205ENST00000469641 RTN4Q9NQC3 1192 aaKnown RBP14.24□□□□□ -0.13
ATP13A1-205ENST00000469641 TIMELESSQ9UNS1 1208 aa14.22□□□□□ -0.13
ATP13A1-205ENST00000469641 ZNF644Q9H582 1327 aaPredicted RBP14.22□□□□□ -0.13
ATP13A1-205ENST00000469641 MLECQ14165 292 aa14.22□□□□□ -0.13
ATP13A1-205ENST00000469641 PLEKHG5O94827 1062 aa14.2□□□□□ -0.14
ATP13A1-205ENST00000469641 FMN1Q68DA7 1419 aa14.19□□□□□ -0.14
ATP13A1-205ENST00000469641 ARHGAP35Q9NRY4 1499 aa14.19□□□□□ -0.14
ATP13A1-205ENST00000469641 EIF4G2P78344 907 aaKnown RBP eCLIP14.18□□□□□ -0.14
ATP13A1-205ENST00000469641 CCER2I3L3R5 266 aa14.18□□□□□ -0.14
ATP13A1-205ENST00000469641 GGT6Q6P531 493 aa14.17□□□□□ -0.14
ATP13A1-205ENST00000469641 CARMIL2Q6F5E8 1435 aa14.17□□□□□ -0.14
ATP13A1-205ENST00000469641 POLA1P09884 1462 aaPredicted RBP14.17□□□□□ -0.14
ATP13A1-205ENST00000469641 ARAP1Q96P48 1450 aa14.17□□□□□ -0.14
ATP13A1-205ENST00000469641 PKD2Q13563 968 aa14.16□□□□□ -0.14
ATP13A1-205ENST00000469641 ARID4BQ4LE39 1312 aaPredicted RBP14.16□□□□□ -0.14
ATP13A1-205ENST00000469641 DEKP35659 375 aaKnown RBP14.15□□□□□ -0.14
ATP13A1-205ENST00000469641 DCAF11Q8TEB1 546 aa14.15□□□□□ -0.14
ATP13A1-205ENST00000469641 TOPBP1Q92547 1522 aa14.15□□□□□ -0.14
ATP13A1-205ENST00000469641 ARXQ96QS3 562 aa14.14□□□□□ -0.15
ATP13A1-205ENST00000469641 HMGXB3Q12766 1538 aa14.14□□□□□ -0.15
ATP13A1-205ENST00000469641 PPP1R15AO75807 674 aaPredicted RBP14.13□□□□□ -0.15
ATP13A1-205ENST00000469641 TMC1Q8TDI8 760 aa14.12□□□□□ -0.15
ATP13A1-205ENST00000469641 MPHOSPH9Q99550 1183 aa14.12□□□□□ -0.15
ATP13A1-205ENST00000469641 CARD11Q9BXL7 1154 aa14.11□□□□□ -0.15
ATP13A1-205ENST00000469641 B4GALNT3Q6L9W6 998 aa14.11□□□□□ -0.15
ATP13A1-205ENST00000469641 PHLDB1Q86UU1 1377 aa14.1□□□□□ -0.15
ATP13A1-205ENST00000469641 OSCARQ8IYS5 282 aa14.1□□□□□ -0.15
ATP13A1-205ENST00000469641 SLC24A1O60721 1099 aa14.09□□□□□ -0.15
ATP13A1-205ENST00000469641 RRBP1Q9P2E9 1410 aaKnown RBP14.09□□□□□ -0.15
ATP13A1-205ENST00000469641 PTPRGP23470 1445 aa14.08□□□□□ -0.16
ATP13A1-205ENST00000469641 NOP58Q9Y2X3 529 aaKnown RBP14.08□□□□□ -0.16
ATP13A1-205ENST00000469641 PRXQ9BXM0 1461 aa14.08□□□□□ -0.16
ATP13A1-205ENST00000469641 GLIPR1L2Q4G1C9 344 aa14.07□□□□□ -0.16
ATP13A1-205ENST00000469641 TOP2BQ02880 1626 aa14.07□□□□□ -0.16
ATP13A1-205ENST00000469641 LAS1LQ9Y4W2 734 aaKnown RBP14.06□□□□□ -0.16
ATP13A1-205ENST00000469641 NUP155O75694 1391 aa14.06□□□□□ -0.16
ATP13A1-205ENST00000469641 ERICH3Q5RHP9 1530 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms