RNA–Protein interactions for RNA: ENST00000469641.5

ATP13A1-205, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 4,241 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-205ENST00000469641 NISCHQ9Y2I1 1504 aa19.59■□□□□ 0.73
ATP13A1-205ENST00000469641 DCAF8L2P0C7V8 631 aa19.15■□□□□ 0.66
ATP13A1-205ENST00000469641 SHROOM4Q9ULL8 1493 aa18.29■□□□□ 0.52
ATP13A1-205ENST00000469641 SUPT5HO00267 1087 aaKnown RBP18.13■□□□□ 0.49
ATP13A1-205ENST00000469641 EHMT2Q96KQ7 1210 aa17.45■□□□□ 0.38
ATP13A1-205ENST00000469641 FAM9AQ8IZU1 332 aaPredicted RBP17.05■□□□□ 0.32
ATP13A1-205ENST00000469641 PCGF6Q9BYE7 350 aa16.94■□□□□ 0.3
ATP13A1-205ENST00000469641 ABCC9O60706 1549 aa16.93■□□□□ 0.3
ATP13A1-205ENST00000469641 PABPN1Q86U42 306 aaKnown RBP eCLIP16.7■□□□□ 0.264e-7■■□□□ 13.9
ATP13A1-205ENST00000469641 TTBK1Q5TCY1 1321 aaPredicted RBP16.7■□□□□ 0.26
ATP13A1-205ENST00000469641 RANGAP1P46060 587 aaPredicted RBP16.66■□□□□ 0.26
ATP13A1-205ENST00000469641 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
ATP13A1-205ENST00000469641 HRCP23327 699 aa16.59■□□□□ 0.25
ATP13A1-205ENST00000469641 PELP1Q8IZL8 1130 aaKnown RBP16.59■□□□□ 0.25
ATP13A1-205ENST00000469641 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
ATP13A1-205ENST00000469641 LOC105371045A0A1W2PR82 267 aa16.45■□□□□ 0.22
ATP13A1-205ENST00000469641 PPARGC1BQ86YN6 1023 aaKnown RBP16.42■□□□□ 0.22
ATP13A1-205ENST00000469641 UBTFP17480 764 aaKnown RBP16.28■□□□□ 0.2
ATP13A1-205ENST00000469641 ZCCHC6Q5VYS8 1495 aaKnown RBP16.25■□□□□ 0.19
ATP13A1-205ENST00000469641 CENPBP07199 599 aaPredicted RBP16.24■□□□□ 0.19
ATP13A1-205ENST00000469641 ZEB1P37275 1124 aaPredicted RBP16.22■□□□□ 0.19
ATP13A1-205ENST00000469641 TRIM26Q12899 539 aaPredicted RBP16.21■□□□□ 0.18
ATP13A1-205ENST00000469641 MYT1Q01538 1121 aa16.16■□□□□ 0.18
ATP13A1-205ENST00000469641 APLP2Q06481 763 aa16.16■□□□□ 0.18
ATP13A1-205ENST00000469641 ATP1B4Q9UN42 357 aaPredicted RBP16.16■□□□□ 0.18
ATP13A1-205ENST00000469641 SCRIBQ14160 1630 aa16.14■□□□□ 0.17
ATP13A1-205ENST00000469641 CCER1Q8TC90 406 aaPredicted RBP16.11■□□□□ 0.17
ATP13A1-205ENST00000469641 CCDC180Q9P1Z9 1646 aa16.05■□□□□ 0.16
ATP13A1-205ENST00000469641 MYO15BQ96JP2 1530 aa16.03■□□□□ 0.16
ATP13A1-205ENST00000469641 YTHDC1Q96MU7 727 aaKnown RBP16.02■□□□□ 0.16
ATP13A1-205ENST00000469641 DCAF1Q9Y4B6 1507 aa15.89■□□□□ 0.13
ATP13A1-205ENST00000469641 ITGAEP38570 1179 aa15.78■□□□□ 0.12
ATP13A1-205ENST00000469641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.72■□□□□ 0.11
ATP13A1-205ENST00000469641 ERICH6Q7L0X2 663 aa15.72■□□□□ 0.11
ATP13A1-205ENST00000469641 HNRNPUL2Q1KMD3 747 aaKnown RBP15.69■□□□□ 0.1
ATP13A1-205ENST00000469641 CECR2Q9BXF3 1484 aa15.67■□□□□ 0.1
ATP13A1-205ENST00000469641 RSF1Q96T23 1441 aaPredicted RBP15.66■□□□□ 0.1
ATP13A1-205ENST00000469641 GTF3C3Q9Y5Q9 886 aa15.63■□□□□ 0.09
ATP13A1-205ENST00000469641 DIEXFQ68CQ4 756 aaKnown RBP15.58■□□□□ 0.09
ATP13A1-205ENST00000469641 RB1CC1Q8TDY2 1594 aa15.58■□□□□ 0.09
ATP13A1-205ENST00000469641 P3H3Q8IVL6 736 aa15.57■□□□□ 0.08
ATP13A1-205ENST00000469641 FBLN2P98095 1184 aa15.54■□□□□ 0.08
ATP13A1-205ENST00000469641 CSRNP3Q8WYN3 585 aa15.53■□□□□ 0.08
ATP13A1-205ENST00000469641 ARID3CA6NKF2 412 aa15.52■□□□□ 0.07
ATP13A1-205ENST00000469641 NACADO15069 1562 aa15.51■□□□□ 0.07
ATP13A1-205ENST00000469641 NEFLP07196 543 aa15.51■□□□□ 0.07
ATP13A1-205ENST00000469641 ACIN1Q9UKV3 1341 aaKnown RBP15.45■□□□□ 0.06
ATP13A1-205ENST00000469641 SCAF1Q9H7N4 1312 aaKnown RBP15.41■□□□□ 0.06
ATP13A1-205ENST00000469641 MROH2BQ7Z745 1585 aa15.36■□□□□ 0.05
ATP13A1-205ENST00000469641 FAM50AQ14320 339 aaKnown RBP15.34■□□□□ 0.05
ATP13A1-205ENST00000469641 MYT1LQ9UL68 1186 aa15.27■□□□□ 0.04
ATP13A1-205ENST00000469641 NEUROD1Q13562 356 aa15.27■□□□□ 0.03
ATP13A1-205ENST00000469641 CNGB1Q14028 1251 aaPredicted RBP15.23■□□□□ 0.03
ATP13A1-205ENST00000469641 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
ATP13A1-205ENST00000469641 ZNF316A6NFI3 1004 aaPredicted RBP15.21■□□□□ 0.03
ATP13A1-205ENST00000469641 BCANQ96GW7 911 aa15.2■□□□□ 0.02
ATP13A1-205ENST00000469641 BAZ1AQ9NRL2 1556 aaPredicted RBP15.18■□□□□ 0.02
ATP13A1-205ENST00000469641 WIZO95785 1651 aa15.14■□□□□ 0.01
ATP13A1-205ENST00000469641 POLR3GLQ9BT43 218 aa15.13■□□□□ 0.01
ATP13A1-205ENST00000469641 WRNQ14191 1432 aaPredicted RBP eCLIP15.12■□□□□ 0.01
ATP13A1-205ENST00000469641 CCDC88BA6NC98 1476 aa15.11■□□□□ 0.01
ATP13A1-205ENST00000469641 SOGA1O94964 1423 aa15.1■□□□□ 0.01
ATP13A1-205ENST00000469641 ABCC8Q09428 1581 aa15.09■□□□□ 0.01
ATP13A1-205ENST00000469641 TRIM52Q96A61 297 aa15.06■□□□□ 0
ATP13A1-205ENST00000469641 ZNF777Q9ULD5 760 aaPredicted RBP15.04■□□□□ -0
ATP13A1-205ENST00000469641 CEP162Q5TB80 1403 aa15□□□□□ -0.01
ATP13A1-205ENST00000469641 CLIP1P30622 1438 aa14.95□□□□□ -0.02
ATP13A1-205ENST00000469641 CHMP7Q8WUX9 453 aaPredicted RBP14.95□□□□□ -0.02
ATP13A1-205ENST00000469641 CHIC2Q9UKJ5 165 aa14.95□□□□□ -0.02
ATP13A1-205ENST00000469641 ZNF326Q5BKZ1 582 aaKnown RBP14.93□□□□□ -0.02
ATP13A1-205ENST00000469641 MIER1Q8N108 512 aa14.92□□□□□ -0.02
ATP13A1-205ENST00000469641 TNIKQ9UKE5 1360 aa14.92□□□□□ -0.02
ATP13A1-205ENST00000469641 RTL5Q5HYW3 569 aaPredicted RBP14.9□□□□□ -0.02
ATP13A1-205ENST00000469641 ATAD2BQ9ULI0 1458 aa14.9□□□□□ -0.02
ATP13A1-205ENST00000469641 EEA1Q15075 1411 aa14.89□□□□□ -0.03
ATP13A1-205ENST00000469641 RUSC2Q8N2Y8 1516 aa14.86□□□□□ -0.03
ATP13A1-205ENST00000469641 DNAJC5BQ9UF47 199 aa14.86□□□□□ -0.03
ATP13A1-205ENST00000469641 TDRD9Q8NDG6 1382 aaKnown RBP14.84□□□□□ -0.03
ATP13A1-205ENST00000469641 GOLGA3Q08378 1498 aa14.84□□□□□ -0.03
ATP13A1-205ENST00000469641 SMARCA4P51532 1647 aa14.83□□□□□ -0.04
ATP13A1-205ENST00000469641 KIF27Q86VH2 1401 aa14.82□□□□□ -0.04
ATP13A1-205ENST00000469641 DAXXQ9UER7 740 aaPredicted RBP14.82□□□□□ -0.04
ATP13A1-205ENST00000469641 CUX2O14529 1486 aa14.82□□□□□ -0.04
ATP13A1-205ENST00000469641 CDK11AQ9UQ88 783 aaPredicted RBP14.8□□□□□ -0.04
ATP13A1-205ENST00000469641 TOP2AP11388 1531 aaKnown RBP14.79□□□□□ -0.04
ATP13A1-205ENST00000469641 FKBP8Q14318 412 aa14.79□□□□□ -0.04
ATP13A1-205ENST00000469641 SMARCA2P51531 1590 aa14.77□□□□□ -0.04
ATP13A1-205ENST00000469641 ERCC6Q03468 1493 aa14.77□□□□□ -0.04
ATP13A1-205ENST00000469641 KCNH8Q96L42 1107 aa14.77□□□□□ -0.05
ATP13A1-205ENST00000469641 HIRIP3Q9BW71 556 aaPredicted RBP14.76□□□□□ -0.05
ATP13A1-205ENST00000469641 ANP32CO43423 234 aa14.74□□□□□ -0.05
ATP13A1-205ENST00000469641 RRP7BPQ9NSQ0 103 aa14.74□□□□□ -0.05
ATP13A1-205ENST00000469641 CARMIL1Q5VZK9 1371 aa14.74□□□□□ -0.05
ATP13A1-205ENST00000469641 MTUS2Q5JR59 1369 aa14.74□□□□□ -0.05
ATP13A1-205ENST00000469641 CLSPNQ9HAW4 1339 aa14.73□□□□□ -0.05
ATP13A1-205ENST00000469641 KANK4Q5T7N3 995 aaPredicted RBP14.73□□□□□ -0.05
ATP13A1-205ENST00000469641 CADPSQ9ULU8 1353 aa14.73□□□□□ -0.05
ATP13A1-205ENST00000469641 CEP164Q9UPV0 1460 aa14.71□□□□□ -0.05
ATP13A1-205ENST00000469641 SLC4A1APQ9BWU0 796 aaKnown RBP14.7□□□□□ -0.06
ATP13A1-205ENST00000469641 SENP3Q9H4L4 574 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms