RNA–Protein interactions for RNA: ENST00000469506.3

TRAK1-207, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2

Gene TRAK1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-207ENST00000469506 KIF13AQ9H1H9 1805 aa33.15■■■□□ 2.9
TRAK1-207ENST00000469506 KIF27Q86VH2 1401 aa33.09■■■□□ 2.89
TRAK1-207ENST00000469506 CUL7Q14999 1698 aa33.07■■■□□ 2.88
TRAK1-207ENST00000469506 KIAA0586Q9BVV6 1533 aa33.04■■■□□ 2.88
TRAK1-207ENST00000469506 ADCY10Q96PN6 1610 aa32.99■■■□□ 2.87
TRAK1-207ENST00000469506 CARMIL1Q5VZK9 1371 aa32.92■■■□□ 2.86
TRAK1-207ENST00000469506 MAPKBP1O60336 1514 aa32.87■■■□□ 2.85
TRAK1-207ENST00000469506 ABCC10Q5T3U5 1492 aa32.87■■■□□ 2.85
TRAK1-207ENST00000469506 FAM69CQ0P6D2 419 aa32.84■■■□□ 2.85
TRAK1-207ENST00000469506 DIP2BQ9P265 1576 aa32.83■■■□□ 2.85
TRAK1-207ENST00000469506 NPM1P06748 294 aaKnown RBP eCLIP32.82■■■□□ 2.84
TRAK1-207ENST00000469506 AEBP2Q6ZN18 517 aaPredicted RBP32.81■■■□□ 2.84
TRAK1-207ENST00000469506 PTPRGP23470 1445 aa32.74■■■□□ 2.83
TRAK1-207ENST00000469506 IQGAP2Q13576 1575 aa32.72■■■□□ 2.83
TRAK1-207ENST00000469506 TTBK1Q5TCY1 1321 aaPredicted RBP32.72■■■□□ 2.83
TRAK1-207ENST00000469506 TSPOAP1O95153 1857 aa32.69■■■□□ 2.82
TRAK1-207ENST00000469506 TNIKQ9UKE5 1360 aa32.67■■■□□ 2.82
TRAK1-207ENST00000469506 CARMIL2Q6F5E8 1435 aa32.64■■■□□ 2.82
TRAK1-207ENST00000469506 DISP1Q96F81 1524 aa32.64■■■□□ 2.82
TRAK1-207ENST00000469506 RAPGEF2Q9Y4G8 1499 aa32.6■■■□□ 2.81
TRAK1-207ENST00000469506 ABCC2Q92887 1545 aa32.59■■■□□ 2.81
TRAK1-207ENST00000469506 UGGT2Q9NYU1 1516 aa32.53■■■□□ 2.8
TRAK1-207ENST00000469506 UHRF1BP1LA0JNW5 1464 aa32.52■■■□□ 2.8
TRAK1-207ENST00000469506 KDM6BO15054 1643 aa32.51■■■□□ 2.8
TRAK1-207ENST00000469506 ASXL2Q76L83 1435 aa32.5■■■□□ 2.79
TRAK1-207ENST00000469506 UACAQ9BZF9 1416 aa32.49■■■□□ 2.79
TRAK1-207ENST00000469506 PPRC1Q5VV67 1664 aaKnown RBP32.47■■■□□ 2.79
TRAK1-207ENST00000469506 KIAA0556O60303 1618 aa32.45■■■□□ 2.79
TRAK1-207ENST00000469506 PLB1Q6P1J6 1458 aa32.42■■■□□ 2.78
TRAK1-207ENST00000469506 GLI2P10070 1586 aa32.42■■■□□ 2.78
TRAK1-207ENST00000469506 CTTNBP2Q8WZ74 1663 aa32.4■■■□□ 2.78
TRAK1-207ENST00000469506 KDM5BQ9UGL1 1544 aa32.4■■■□□ 2.78
TRAK1-207ENST00000469506 ZCCHC11Q5TAX3 1644 aaKnown RBP32.37■■■□□ 2.77
TRAK1-207ENST00000469506 EPRSP07814 1512 aaKnown RBP32.31■■■□□ 2.76
TRAK1-207ENST00000469506 KDM4FA0A1W2PPD8 638 aa32.31■■■□□ 2.76
TRAK1-207ENST00000469506 PRXQ9BXM0 1461 aa32.29■■■□□ 2.76
TRAK1-207ENST00000469506 MAP3K4Q9Y6R4 1608 aa32.28■■■□□ 2.76
TRAK1-207ENST00000469506 COL17A1Q9UMD9 1497 aaPredicted RBP32.24■■■□□ 2.75
TRAK1-207ENST00000469506 ABCA8O94911 1581 aa32.19■■■□□ 2.74
TRAK1-207ENST00000469506 GOLGA3Q08378 1498 aa32.16■■■□□ 2.74
TRAK1-207ENST00000469506 WDR7Q9Y4E6 1490 aa32.14■■■□□ 2.74
TRAK1-207ENST00000469506 TEX14Q8IWB6 1497 aa32.06■■■□□ 2.72
TRAK1-207ENST00000469506 P3H3Q8IVL6 736 aa32.02■■■□□ 2.72
TRAK1-207ENST00000469506 KCNH8Q96L42 1107 aa32.01■■■□□ 2.71
TRAK1-207ENST00000469506 CFAP43Q8NDM7 1665 aa31.99■■■□□ 2.71
TRAK1-207ENST00000469506 CSRNP3Q8WYN3 585 aa31.98■■■□□ 2.71
TRAK1-207ENST00000469506 ADGRL1O94910 1474 aa31.97■■■□□ 2.71
TRAK1-207ENST00000469506 CD109Q6YHK3 1445 aa31.96■■■□□ 2.71
TRAK1-207ENST00000469506 ARID3CA6NKF2 412 aa31.94■■■□□ 2.7
TRAK1-207ENST00000469506 MAGI3Q5TCQ9 1506 aa31.94■■■□□ 2.7
TRAK1-207ENST00000469506 SAMD9Q5K651 1589 aa31.93■■■□□ 2.7
TRAK1-207ENST00000469506 ATP10BO94823 1461 aa31.92■■■□□ 2.7
TRAK1-207ENST00000469506 RAPGEF6Q8TEU7 1601 aa31.81■■■□□ 2.68
TRAK1-207ENST00000469506 ABCA9Q8IUA7 1624 aa31.75■■■□□ 2.67
TRAK1-207ENST00000469506 EEA1Q15075 1411 aa31.75■■■□□ 2.67
TRAK1-207ENST00000469506 RANGAP1P46060 587 aaPredicted RBP31.74■■■□□ 2.67
TRAK1-207ENST00000469506 FAM9AQ8IZU1 332 aaPredicted RBP31.73■■■□□ 2.67
TRAK1-207ENST00000469506 ARAP3Q8WWN8 1544 aa31.71■■■□□ 2.67
TRAK1-207ENST00000469506 NUP153P49790 1475 aaKnown RBP31.71■■■□□ 2.67
TRAK1-207ENST00000469506 FHOD3Q2V2M9 1422 aa31.7■■■□□ 2.67
TRAK1-207ENST00000469506 KIF21BO75037 1637 aa31.68■■■□□ 2.66
TRAK1-207ENST00000469506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.61■■■□□ 2.65
TRAK1-207ENST00000469506 HNRNPUL2Q1KMD3 747 aaKnown RBP31.61■■■□□ 2.65
TRAK1-207ENST00000469506 HECW2Q9P2P5 1572 aa31.58■■■□□ 2.65
TRAK1-207ENST00000469506 RAPGEF3O95398 923 aa31.56■■■□□ 2.64
TRAK1-207ENST00000469506 FRMPD1Q5SYB0 1578 aa31.53■■■□□ 2.64
TRAK1-207ENST00000469506 PHLDB1Q86UU1 1377 aa31.53■■■□□ 2.64
TRAK1-207ENST00000469506 NEO1Q92859 1461 aa31.52■■■□□ 2.64
TRAK1-207ENST00000469506 EFCAB5A4FU69 1503 aa31.5■■■□□ 2.63
TRAK1-207ENST00000469506 EHMT2Q96KQ7 1210 aa31.46■■■□□ 2.63
TRAK1-207ENST00000469506 PLEKHD1A6NEE1 506 aa31.44■■■□□ 2.62
TRAK1-207ENST00000469506 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.44■■■□□ 2.62
TRAK1-207ENST00000469506 ADAMTSL3P82987 1691 aa31.43■■■□□ 2.62
TRAK1-207ENST00000469506 CDK13Q14004 1512 aaKnown RBP31.41■■■□□ 2.62
TRAK1-207ENST00000469506 TTC37Q6PGP7 1564 aa31.41■■■□□ 2.62
TRAK1-207ENST00000469506 RICTORQ6R327 1708 aa31.4■■■□□ 2.62
TRAK1-207ENST00000469506 CHIC1Q5VXU3 224 aa31.39■■■□□ 2.62
TRAK1-207ENST00000469506 ILDR1Q86SU0 546 aaPredicted RBP31.36■■■□□ 2.61
TRAK1-207ENST00000469506 AKNAQ7Z591 1439 aa31.35■■■□□ 2.61
TRAK1-207ENST00000469506 BCORL1Q5H9F3 1711 aa31.35■■■□□ 2.61
TRAK1-207ENST00000469506 FANCAO15360 1455 aa31.33■■■□□ 2.61
TRAK1-207ENST00000469506 UBTFP17480 764 aaKnown RBP31.32■■■□□ 2.6
TRAK1-207ENST00000469506 DENND4BO75064 1496 aaPredicted RBP31.31■■■□□ 2.6
TRAK1-207ENST00000469506 PTPRMP28827 1452 aa31.31■■■□□ 2.6
TRAK1-207ENST00000469506 ARHGAP35Q9NRY4 1499 aa31.31■■■□□ 2.6
TRAK1-207ENST00000469506 CFAP74Q9C0B2 1584 aa31.28■■■□□ 2.6
TRAK1-207ENST00000469506 ARHGEF40Q8TER5 1519 aa31.28■■■□□ 2.6
TRAK1-207ENST00000469506 MADDQ8WXG6 1647 aa31.27■■■□□ 2.6
TRAK1-207ENST00000469506 SIGLEC1Q9BZZ2 1709 aa31.27■■■□□ 2.6
TRAK1-207ENST00000469506 LRRIQ1Q96JM4 1722 aa31.23■■■□□ 2.59
TRAK1-207ENST00000469506 ARID4BQ4LE39 1312 aaPredicted RBP31.22■■■□□ 2.59
TRAK1-207ENST00000469506 HECW1Q76N89 1606 aa31.2■■■□□ 2.59
TRAK1-207ENST00000469506 ZMYM4Q5VZL5 1548 aa31.2■■■□□ 2.59
TRAK1-207ENST00000469506 ATP1B4Q9UN42 357 aaPredicted RBP31.2■■■□□ 2.59
TRAK1-207ENST00000469506 FMN1Q68DA7 1419 aa31.2■■■□□ 2.59
TRAK1-207ENST00000469506 PLCH2O75038 1416 aa31.19■■■□□ 2.58
TRAK1-207ENST00000469506 YEATS2Q9ULM3 1422 aa31.19■■■□□ 2.58
TRAK1-207ENST00000469506 KIF14Q15058 1648 aa31.17■■■□□ 2.58
TRAK1-207ENST00000469506 RIMS1Q86UR5 1692 aaKnown RBP31.16■■■□□ 2.58
TRAK1-207ENST00000469506 MYO5CQ9NQX4 1742 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms