RNA–Protein interactions for RNA: ENST00000469506.3

TRAK1-207, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2

Gene TRAK1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-207ENST00000469506 NISCHQ9Y2I1 1504 aa47.51■■■■■ 5.2
TRAK1-207ENST00000469506 ABCC9O60706 1549 aa42.7■■■■■ 4.43
TRAK1-207ENST00000469506 CCDC180Q9P1Z9 1646 aa42.61■■■■■ 4.41
TRAK1-207ENST00000469506 RB1CC1Q8TDY2 1594 aa40.55■■■■■ 4.08
TRAK1-207ENST00000469506 NACADO15069 1562 aa40.27■■■■■ 4.04
TRAK1-207ENST00000469506 DNAJC5BQ9UF47 199 aa40.21■■■■■ 4.03
TRAK1-207ENST00000469506 DCAF8L2P0C7V8 631 aa40.08■■■■■ 4.01
TRAK1-207ENST00000469506 UNC13AQ9UPW8 1703 aa39.85■■■■□ 3.97
TRAK1-207ENST00000469506 PABPN1Q86U42 306 aaKnown RBP eCLIP39.77■■■■□ 3.96
TRAK1-207ENST00000469506 MYO15BQ96JP2 1530 aa39.68■■■■□ 3.94
TRAK1-207ENST00000469506 BICRAQ9NZM4 1560 aa39.52■■■■□ 3.92
TRAK1-207ENST00000469506 ZCCHC6Q5VYS8 1495 aaKnown RBP39.36■■■■□ 3.89
TRAK1-207ENST00000469506 DCAF1Q9Y4B6 1507 aa39.19■■■■□ 3.86
TRAK1-207ENST00000469506 SCRIBQ14160 1630 aa38.89■■■■□ 3.82
TRAK1-207ENST00000469506 SHROOM4Q9ULL8 1493 aa38.75■■■■□ 3.79
TRAK1-207ENST00000469506 CC2D2AQ9P2K1 1620 aa38.59■■■■□ 3.77
TRAK1-207ENST00000469506 EIF4G1Q04637 1599 aaKnown RBP38.47■■■■□ 3.75
TRAK1-207ENST00000469506 CECR2Q9BXF3 1484 aa38.42■■■■□ 3.74
TRAK1-207ENST00000469506 NCAPD3P42695 1498 aa37.2■■■■□ 3.55
TRAK1-207ENST00000469506 ATAD2BQ9ULI0 1458 aa37.12■■■■□ 3.53
TRAK1-207ENST00000469506 SMARCA4P51532 1647 aa37.08■■■■□ 3.53
TRAK1-207ENST00000469506 SMARCA2P51531 1590 aa36.93■■■■□ 3.5
TRAK1-207ENST00000469506 HMGXB3Q12766 1538 aa36.9■■■■□ 3.5
TRAK1-207ENST00000469506 BAZ1AQ9NRL2 1556 aaPredicted RBP36.83■■■■□ 3.49
TRAK1-207ENST00000469506 DNAJC5Q9H3Z4 198 aa36.8■■■■□ 3.48
TRAK1-207ENST00000469506 ERCC6Q03468 1493 aa36.76■■■■□ 3.48
TRAK1-207ENST00000469506 NESP48681 1621 aa36.73■■■■□ 3.47
TRAK1-207ENST00000469506 CUX2O14529 1486 aa36.72■■■■□ 3.47
TRAK1-207ENST00000469506 PEG3Q9GZU2 1588 aa36.7■■■■□ 3.46
TRAK1-207ENST00000469506 BAZ1BQ9UIG0 1483 aaKnown RBP36.69■■■■□ 3.46
TRAK1-207ENST00000469506 MROH2BQ7Z745 1585 aa36.67■■■■□ 3.46
TRAK1-207ENST00000469506 LAMC3Q9Y6N6 1575 aa36.35■■■■□ 3.41
TRAK1-207ENST00000469506 THOC2Q8NI27 1593 aaKnown RBP36.33■■■■□ 3.41
TRAK1-207ENST00000469506 KIF21AQ7Z4S6 1674 aa36.26■■■■□ 3.39
TRAK1-207ENST00000469506 WIZO95785 1651 aa36.25■■■■□ 3.39
TRAK1-207ENST00000469506 PDS5BQ9NTI5 1447 aa36.08■■■■□ 3.37
TRAK1-207ENST00000469506 CADPSQ9ULU8 1353 aa36.05■■■■□ 3.36
TRAK1-207ENST00000469506 RSF1Q96T23 1441 aaPredicted RBP35.85■■■■□ 3.33
TRAK1-207ENST00000469506 MRC2Q9UBG0 1479 aa35.83■■■■□ 3.33
TRAK1-207ENST00000469506 WDR62O43379 1518 aa35.78■■■■□ 3.32
TRAK1-207ENST00000469506 TOP2AP11388 1531 aaKnown RBP35.69■■■■□ 3.3
TRAK1-207ENST00000469506 FANCD2Q9BXW9 1451 aa35.67■■■■□ 3.3
TRAK1-207ENST00000469506 CEP164Q9UPV0 1460 aa35.67■■■■□ 3.3
TRAK1-207ENST00000469506 CFTRP13569 1480 aa35.66■■■■□ 3.3
TRAK1-207ENST00000469506 URB2Q14146 1524 aaKnown RBP35.43■■■■□ 3.26
TRAK1-207ENST00000469506 PRDM2Q13029 1718 aa35.36■■■■□ 3.25
TRAK1-207ENST00000469506 CCDC88BA6NC98 1476 aa35.34■■■■□ 3.25
TRAK1-207ENST00000469506 TRIM41Q8WV44 630 aa35.16■■■■□ 3.22
TRAK1-207ENST00000469506 OSCARQ8IYS5 282 aa35.04■■■■□ 3.2
TRAK1-207ENST00000469506 TOPBP1Q92547 1522 aa35.01■■■■□ 3.2
TRAK1-207ENST00000469506 ZNF608Q9ULD9 1512 aaPredicted RBP35.01■■■■□ 3.2
TRAK1-207ENST00000469506 IFT140Q96RY7 1462 aa34.95■■■■□ 3.19
TRAK1-207ENST00000469506 DNMBPQ6XZF7 1577 aa34.85■■■■□ 3.17
TRAK1-207ENST00000469506 ABCC8Q09428 1581 aa34.82■■■■□ 3.16
TRAK1-207ENST00000469506 EIF4G3O43432 1585 aaKnown RBP34.78■■■■□ 3.16
TRAK1-207ENST00000469506 TARBP1Q13395 1621 aaKnown RBP34.75■■■■□ 3.15
TRAK1-207ENST00000469506 RIMBP3CA6NJZ7 1639 aa34.7■■■■□ 3.14
TRAK1-207ENST00000469506 RIMBP3BA6NNM3 1639 aa34.7■■■■□ 3.14
TRAK1-207ENST00000469506 RIMBP3Q9UFD9 1639 aa34.7■■■■□ 3.14
TRAK1-207ENST00000469506 AQRO60306 1485 aaKnown RBP eCLIP34.67■■■■□ 3.142e-9■■□□□ 12.1
TRAK1-207ENST00000469506 POLA1P09884 1462 aaPredicted RBP34.65■■■■□ 3.14
TRAK1-207ENST00000469506 CHD1O14646 1710 aa34.58■■■■□ 3.13
TRAK1-207ENST00000469506 RAD54L2Q9Y4B4 1467 aa34.57■■■■□ 3.12
TRAK1-207ENST00000469506 ARHGEF11O15085 1522 aa34.54■■■■□ 3.12
TRAK1-207ENST00000469506 SOGA1O94964 1423 aa34.47■■■■□ 3.11
TRAK1-207ENST00000469506 TDRD9Q8NDG6 1382 aaKnown RBP34.44■■■■□ 3.1
TRAK1-207ENST00000469506 CUX1P39880 1505 aa34.44■■■■□ 3.1
TRAK1-207ENST00000469506 FGD5Q6ZNL6 1462 aa34.43■■■■□ 3.1
TRAK1-207ENST00000469506 FBLN2P98095 1184 aa34.37■■■■□ 3.09
TRAK1-207ENST00000469506 CYB5RLQ6IPT4 315 aa34.28■■■■□ 3.08
TRAK1-207ENST00000469506 SNAPC4Q5SXM2 1469 aa34.27■■■■□ 3.08
TRAK1-207ENST00000469506 WDR97A6NE52 1622 aa34.25■■■■□ 3.07
TRAK1-207ENST00000469506 SUPT5HO00267 1087 aaKnown RBP34.23■■■■□ 3.07
TRAK1-207ENST00000469506 ARAP1Q96P48 1450 aa34.22■■■■□ 3.07
TRAK1-207ENST00000469506 CLASP1Q7Z460 1538 aa34.14■■■■□ 3.06
TRAK1-207ENST00000469506 GRIN2BQ13224 1484 aa34.14■■■■□ 3.06
TRAK1-207ENST00000469506 MAGI1Q96QZ7 1491 aaPredicted RBP34.13■■■■□ 3.05
TRAK1-207ENST00000469506 PBRM1Q86U86 1689 aa34.1■■■■□ 3.05
TRAK1-207ENST00000469506 CHMP7Q8WUX9 453 aaPredicted RBP34.08■■■■□ 3.05
TRAK1-207ENST00000469506 GAPVD1Q14C86 1478 aa34.04■■■■□ 3.04
TRAK1-207ENST00000469506 SYNJ1O43426 1573 aa34.03■■■■□ 3.04
TRAK1-207ENST00000469506 SYNJ2O15056 1496 aa34.03■■■■□ 3.04
TRAK1-207ENST00000469506 ABCA5Q8WWZ7 1642 aa34.01■■■■□ 3.04
TRAK1-207ENST00000469506 ABCA10Q8WWZ4 1543 aa34.01■■■■□ 3.04
TRAK1-207ENST00000469506 BIVM-ERCC5R4GMW8 1640 aa33.86■■■■□ 3.01
TRAK1-207ENST00000469506 TRHP20396 242 aaPredicted RBP33.84■■■■□ 3.01
TRAK1-207ENST00000469506 TOP2BQ02880 1626 aa33.83■■■■□ 3.01
TRAK1-207ENST00000469506 WRNQ14191 1432 aaPredicted RBP eCLIP33.81■■■■□ 3
TRAK1-207ENST00000469506 ADAMTS12P58397 1594 aa33.73■■■□□ 2.99
TRAK1-207ENST00000469506 GRIN2AQ12879 1464 aa33.73■■■□□ 2.99
TRAK1-207ENST00000469506 ERCC6L2Q5T890 1561 aa33.69■■■□□ 2.98
TRAK1-207ENST00000469506 CEP170Q5SW79 1584 aa33.68■■■□□ 2.98
TRAK1-207ENST00000469506 NUP160Q12769 1436 aa33.63■■■□□ 2.97
TRAK1-207ENST00000469506 FHAD1B1AJZ9 1412 aa33.58■■■□□ 2.97
TRAK1-207ENST00000469506 ERICH3Q5RHP9 1530 aa33.56■■■□□ 2.96
TRAK1-207ENST00000469506 SHROOM2Q13796 1616 aa33.53■■■□□ 2.96
TRAK1-207ENST00000469506 PRG4Q92954 1404 aaPredicted RBP33.29■■■□□ 2.92
TRAK1-207ENST00000469506 JPH4Q96JJ6 628 aa33.27■■■□□ 2.92
TRAK1-207ENST00000469506 RUSC2Q8N2Y8 1516 aa33.26■■■□□ 2.91
TRAK1-207ENST00000469506 IGF1RP08069 1367 aa33.19■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms