RNA–Protein interactions for RNA: ENST00000469217.5

PCCB-209, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PCCB, Length 1,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-209ENST00000469217 OSCARQ8IYS5 282 aa28.23■■■□□ 2.11
PCCB-209ENST00000469217 CTTNBP2Q8WZ74 1663 aa28.22■■■□□ 2.11
PCCB-209ENST00000469217 KIAA0586Q9BVV6 1533 aa28.21■■■□□ 2.11
PCCB-209ENST00000469217 TNIKQ9UKE5 1360 aa28.21■■■□□ 2.11
PCCB-209ENST00000469217 IQGAP2Q13576 1575 aa28.15■■■□□ 2.1
PCCB-209ENST00000469217 CLASP1Q7Z460 1538 aa28.15■■■□□ 2.1
PCCB-209ENST00000469217 RANGAP1P46060 587 aaPredicted RBP28.09■■■□□ 2.09
PCCB-209ENST00000469217 JPH4Q96JJ6 628 aa28.06■■■□□ 2.08
PCCB-209ENST00000469217 UGGT2Q9NYU1 1516 aa28.01■■■□□ 2.07
PCCB-209ENST00000469217 SHROOM2Q13796 1616 aa28.01■■■□□ 2.07
PCCB-209ENST00000469217 CEP162Q5TB80 1403 aa28■■■□□ 2.07
PCCB-209ENST00000469217 CLIP1P30622 1438 aa27.95■■■□□ 2.06
PCCB-209ENST00000469217 PRG4Q92954 1404 aaPredicted RBP27.94■■■□□ 2.06
PCCB-209ENST00000469217 DISP1Q96F81 1524 aa27.93■■■□□ 2.06
PCCB-209ENST00000469217 ARHGAP35Q9NRY4 1499 aa27.91■■■□□ 2.06
PCCB-209ENST00000469217 SAMD9Q5K651 1589 aa27.9■■■□□ 2.06
PCCB-209ENST00000469217 EFCAB5A4FU69 1503 aa27.89■■■□□ 2.06
PCCB-209ENST00000469217 P3H3Q8IVL6 736 aa27.89■■■□□ 2.06
PCCB-209ENST00000469217 ERCC6L2Q5T890 1561 aa27.88■■■□□ 2.05
PCCB-209ENST00000469217 KIAA0556O60303 1618 aa27.87■■■□□ 2.05
PCCB-209ENST00000469217 CARMIL2Q6F5E8 1435 aa27.87■■■□□ 2.05
PCCB-209ENST00000469217 FHOD3Q2V2M9 1422 aa27.81■■■□□ 2.04
PCCB-209ENST00000469217 ARAP1Q96P48 1450 aa27.79■■■□□ 2.04
PCCB-209ENST00000469217 ARHGEF11O15085 1522 aa27.76■■■□□ 2.03
PCCB-209ENST00000469217 TTBK1Q5TCY1 1321 aaPredicted RBP27.74■■■□□ 2.03
PCCB-209ENST00000469217 RIMBP3CA6NJZ7 1639 aa27.69■■■□□ 2.02
PCCB-209ENST00000469217 RIMBP3BA6NNM3 1639 aa27.69■■■□□ 2.02
PCCB-209ENST00000469217 RIMBP3Q9UFD9 1639 aa27.69■■■□□ 2.02
PCCB-209ENST00000469217 PTPRGP23470 1445 aa27.69■■■□□ 2.02
PCCB-209ENST00000469217 FMN1Q68DA7 1419 aa27.64■■■□□ 2.02
PCCB-209ENST00000469217 DNAJC5Q9H3Z4 198 aa27.62■■■□□ 2.01
PCCB-209ENST00000469217 VPS8Q8N3P4 1428 aa27.6■■■□□ 2.01
PCCB-209ENST00000469217 PLB1Q6P1J6 1458 aa27.57■■■□□ 2
PCCB-209ENST00000469217 ABCA8O94911 1581 aa27.53■■■□□ 2
PCCB-209ENST00000469217 PCF11O94913 1555 aaKnown RBP27.53■■■□□ 2
PCCB-209ENST00000469217 UACAQ9BZF9 1416 aa27.52■■■□□ 2
PCCB-209ENST00000469217 CYB5RLQ6IPT4 315 aa27.51■■□□□ 1.99
PCCB-209ENST00000469217 RAPGEF6Q8TEU7 1601 aa27.51■■□□□ 1.99
PCCB-209ENST00000469217 CASKIN1Q8WXD9 1431 aa27.5■■□□□ 1.99
PCCB-209ENST00000469217 ATP1B4Q9UN42 357 aaPredicted RBP27.48■■□□□ 1.99
PCCB-209ENST00000469217 FYCO1Q9BQS8 1478 aa27.47■■□□□ 1.99
PCCB-209ENST00000469217 ABCC2Q92887 1545 aa27.45■■□□□ 1.98
PCCB-209ENST00000469217 NUP153P49790 1475 aaKnown RBP27.44■■□□□ 1.98
PCCB-209ENST00000469217 HECW1Q76N89 1606 aa27.42■■□□□ 1.98
PCCB-209ENST00000469217 UHRF1BP1LA0JNW5 1464 aa27.42■■□□□ 1.98
PCCB-209ENST00000469217 ADCY10Q96PN6 1610 aa27.42■■□□□ 1.98
PCCB-209ENST00000469217 ARID3CA6NKF2 412 aa27.41■■□□□ 1.98
PCCB-209ENST00000469217 LRRIQ1Q96JM4 1722 aa27.37■■□□□ 1.97
PCCB-209ENST00000469217 EPRSP07814 1512 aaKnown RBP27.36■■□□□ 1.97
PCCB-209ENST00000469217 ATP10BO94823 1461 aa27.33■■□□□ 1.97
PCCB-209ENST00000469217 CDK13Q14004 1512 aaKnown RBP27.32■■□□□ 1.96
PCCB-209ENST00000469217 KDM5BQ9UGL1 1544 aa27.31■■□□□ 1.96
PCCB-209ENST00000469217 CCDC18Q5T9S5 1454 aa27.3■■□□□ 1.96
PCCB-209ENST00000469217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.29■■□□□ 1.96
PCCB-209ENST00000469217 APLP2Q06481 763 aa27.29■■□□□ 1.96
PCCB-209ENST00000469217 HNRNPUL2Q1KMD3 747 aaKnown RBP27.29■■□□□ 1.96
PCCB-209ENST00000469217 ZCCHC11Q5TAX3 1644 aaKnown RBP27.27■■□□□ 1.96
PCCB-209ENST00000469217 TIAM1Q13009 1591 aa27.25■■□□□ 1.95
PCCB-209ENST00000469217 NPM1P06748 294 aaKnown RBP eCLIP27.25■■□□□ 1.95
PCCB-209ENST00000469217 MAP3K1Q13233 1512 aa27.24■■□□□ 1.95
PCCB-209ENST00000469217 CFAP43Q8NDM7 1665 aa27.23■■□□□ 1.95
PCCB-209ENST00000469217 KANK4Q5T7N3 995 aaPredicted RBP27.18■■□□□ 1.94
PCCB-209ENST00000469217 CDK11AQ9UQ88 783 aaPredicted RBP27.17■■□□□ 1.94
PCCB-209ENST00000469217 MAGI3Q5TCQ9 1506 aa27.17■■□□□ 1.94
PCCB-209ENST00000469217 PLEKHD1A6NEE1 506 aa27.16■■□□□ 1.94
PCCB-209ENST00000469217 LRRC9Q6ZRR7 1453 aa27.14■■□□□ 1.94
PCCB-209ENST00000469217 PPARGC1BQ86YN6 1023 aaKnown RBP27.13■■□□□ 1.93
PCCB-209ENST00000469217 MTUS2Q5JR59 1369 aa27.12■■□□□ 1.93
PCCB-209ENST00000469217 ASXL2Q76L83 1435 aa27.11■■□□□ 1.93
PCCB-209ENST00000469217 TROQ12816 1431 aaPredicted RBP27.09■■□□□ 1.93
PCCB-209ENST00000469217 MAPKBP1O60336 1514 aa27.09■■□□□ 1.93
PCCB-209ENST00000469217 EHBP1L1Q8N3D4 1523 aa27.07■■□□□ 1.92
PCCB-209ENST00000469217 WDR7Q9Y4E6 1490 aa27.07■■□□□ 1.92
PCCB-209ENST00000469217 KCNH8Q96L42 1107 aa27.03■■□□□ 1.92
PCCB-209ENST00000469217 KIF14Q15058 1648 aa27■■□□□ 1.91
PCCB-209ENST00000469217 SUPT6HQ7KZ85 1726 aaKnown RBP26.97■■□□□ 1.91
PCCB-209ENST00000469217 NCOA2Q15596 1464 aa26.95■■□□□ 1.9
PCCB-209ENST00000469217 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.92■■□□□ 1.93e-8■■■□□ 16.7
PCCB-209ENST00000469217 ABCC10Q5T3U5 1492 aa26.9■■□□□ 1.9
PCCB-209ENST00000469217 TTC37Q6PGP7 1564 aa26.88■■□□□ 1.89
PCCB-209ENST00000469217 DIP2BQ9P265 1576 aa26.87■■□□□ 1.89
PCCB-209ENST00000469217 PHLDB1Q86UU1 1377 aa26.87■■□□□ 1.89
PCCB-209ENST00000469217 ABCA9Q8IUA7 1624 aa26.85■■□□□ 1.89
PCCB-209ENST00000469217 FAM69CQ0P6D2 419 aa26.84■■□□□ 1.89
PCCB-209ENST00000469217 CCNB3Q8WWL7 1395 aa26.83■■□□□ 1.89
PCCB-209ENST00000469217 GLI2P10070 1586 aa26.83■■□□□ 1.89
PCCB-209ENST00000469217 GPATCH8Q9UKJ3 1502 aaKnown RBP26.81■■□□□ 1.88
PCCB-209ENST00000469217 KIF13AQ9H1H9 1805 aa26.79■■□□□ 1.88
PCCB-209ENST00000469217 MYOM3Q5VTT5 1437 aa26.79■■□□□ 1.88
PCCB-209ENST00000469217 CDC42BPAQ5VT25 1732 aa26.78■■□□□ 1.88
PCCB-209ENST00000469217 CD109Q6YHK3 1445 aa26.77■■□□□ 1.88
PCCB-209ENST00000469217 MYO5CQ9NQX4 1742 aa26.76■■□□□ 1.88
PCCB-209ENST00000469217 MAP3K4Q9Y6R4 1608 aa26.76■■□□□ 1.87
PCCB-209ENST00000469217 PLCH2O75038 1416 aa26.75■■□□□ 1.87
PCCB-209ENST00000469217 ITSN2Q9NZM3 1697 aa26.74■■□□□ 1.87
PCCB-209ENST00000469217 PREX2Q70Z35 1606 aa26.74■■□□□ 1.87
PCCB-209ENST00000469217 CFDP1Q9UEE9 299 aaPredicted RBP26.73■■□□□ 1.87
PCCB-209ENST00000469217 CDC42BPBQ9Y5S2 1711 aa26.73■■□□□ 1.87
PCCB-209ENST00000469217 TRHP20396 242 aaPredicted RBP26.72■■□□□ 1.87
PCCB-209ENST00000469217 FGD6Q6ZV73 1430 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms